Mock Version: 1.3.4
ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target armv7hl --nodeps /builddir/build/SPECS/lammps.spec'], nspawn_args=[]shell=Falseuid=995env={'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PS1': '<mock-chroot> \\s-\\v\\$ '}chrootPath='/var/lib/mock/epel-1-armhfp-89d3ed6472777fda7efda52a57a03afade70e654/root'gid=135user='mockbuild'timeout=0logger=<mockbuild.trace_decorator.getLog object at 0xb6117670>printOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target armv7hl --nodeps /builddir/build/SPECS/lammps.spec'] with env {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PS1': '<mock-chroot> \\s-\\v\\$ '} and shell False
Building target platforms: armv7hl
Building for target armv7hl
Wrote: /builddir/build/SRPMS/lammps-20190807-2.el7.src.rpm
Child return code was: 0
ENTER ['do'](['bash', '--login', '-c', u'/usr/bin/rpmbuild -bb --target armv7hl --nodeps /builddir/build/SPECS/lammps.spec'], nspawn_args=[]shell=Falseuid=995env={'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PS1': '<mock-chroot> \\s-\\v\\$ '}chrootPath='/var/lib/mock/epel-1-armhfp-89d3ed6472777fda7efda52a57a03afade70e654/root'gid=135user='mockbuild'timeout=0logger=<mockbuild.trace_decorator.getLog object at 0xb6117670>printOutput=False)
Executing command: ['bash', '--login', '-c', u'/usr/bin/rpmbuild -bb --target armv7hl --nodeps /builddir/build/SPECS/lammps.spec'] with env {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOSTNAME': 'mock', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'HOME': '/builddir', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PS1': '<mock-chroot> \\s-\\v\\$ '} and shell False
Building target platforms: armv7hl
Building for target armv7hl
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.nkPSsv
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf lammps-stable_7Aug2019
+ /usr/bin/gzip -dc /builddir/build/SOURCES/lammps-stable_7Aug2019.tar.gz
+ /usr/bin/tar -xf -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd lammps-stable_7Aug2019
+ /usr/bin/gzip -dc /builddir/build/SOURCES/lammps-testing-d0394a77fa2b4b2d545a73ea092cf6de7616aac8.tar.gz
+ /usr/bin/tar -xf -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ find . -type f '(' -name '*.cpp' -or -name '*.h' ')' -exec sed -e '/#pragma omp/s/default(none)/default(shared)/' -e '/#pragma omp/s/shared([^)]\+)//' -i '{}' +
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.HuZYdm
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-stable_7Aug2019
+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 30280 -ocomm=
+++ /bin/basename sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ '[' '' = '' ']'
+++ LOADEDMODULES=
+++ export LOADEDMODULES
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ for mpi in ''\'''\''' mpich openmpi openmpi3
+ test -n ''
+ mkdir -p serial
~/build/BUILD/lammps-stable_7Aug2019/serial ~/build/BUILD/lammps-stable_7Aug2019
+ pushd serial
+ cp -al ../lammps-testing-d0394a77fa2b4b2d545a73ea092cf6de7616aac8 tests/
+ CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ export CFLAGS
+ CXXFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ export CXXFLAGS
+ FFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro '
+ export LDFLAGS
++ test -z ''
++ echo -DBUILD_MPI=OFF -DPKG_MPIIO=OFF
+ /usr/bin/cmake3 -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DBUILD_SHARED_LIBS:BOOL=ON -C ../cmake/presets/all_on.cmake -C ../cmake/presets/nolib.cmake -DBUILD_LIB=ON -DPKG_PYTHON=ON -DPKG_VORONOI=ON -DPKG_USER-ATC=ON -DPKG_USER-H5MD=ON -DPKG_KIM=ON -DBUILD_TOOLS=ON -DENABLE_TESTING=ON -DPYTHON_INSTDIR=/usr/lib/python3.6/site-packages -DCMAKE_INSTALL_SYSCONFDIR=/etc -DPKG_GPU=ON -DGPU_API=OpenCL -DBUILD_OMP=ON -DFFT=FFTW3 -DPKG_USER-INTEL=OFF -DCMAKE_INSTALL_BINDIR=/usr/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib -DLAMMPS_MACHINE= -DLAMMPS_LIB_SUFFIX= -DCMAKE_INSTALL_MANDIR=/usr/share/man -DBUILD_MPI=OFF -DPKG_MPIIO=OFF -DLAMMPS_TESTING_SOURCE_DIR=/builddir/build/BUILD/lammps-stable_7Aug2019/serial/tests ../cmake
loading initial cache file ../cmake/presets/all_on.cmake
loading initial cache file ../cmake/presets/nolib.cmake
-- The CXX compiler identification is GNU 4.8.5
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Could NOT find Git (missing: GIT_EXECUTABLE) 
-- Running check for auto-generated files from make-based build system
-- The C compiler identification is GNU 4.8.5
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Found OpenMP_C: -fopenmp (found version "3.1") 
-- Found OpenMP_CXX: -fopenmp (found version "3.1") 
-- Found OpenMP: TRUE (found version "3.1")  
-- Looking for C++ include omp.h
-- Looking for C++ include omp.h - found
-- Looking for sgemm_
-- Looking for sgemm_ - not found
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - found
-- Found Threads: TRUE  
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- Found BLAS: /usr/lib/libopenblas.so  
-- Looking for cheev_
-- Looking for cheev_ - found
-- A library with LAPACK API found.
-- Found JPEG: /usr/lib/libjpeg.so (found version "62") 
-- Found PNG: /usr/lib/libpng.so (found version "1.5.13") 
-- Found ZLIB: /usr/lib/libz.so (found version "1.2.7") 
-- Found GZIP: /usr/bin/gzip  
-- Could NOT find FFMPEG (missing: FFMPEG_EXECUTABLE) 
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.27.1") 
-- Checking for module 'fftw3'
--   Found fftw3, version 3.3.3
-- Found FFTW3: /usr/lib/libfftw3.so  
-- Found PythonLibs: /usr/lib/libpython3.6m.so (found version "3.6.8") 
-- Found VORO: /usr/lib/libvoro++.so  
-- Could NOT find CURL (missing: CURL_LIBRARY CURL_INCLUDE_DIR) 
-- Checking for module 'libkim-api>=2.0'
--   Found libkim-api, version 2.1.3
-- Found KIM-API: kim-api  
-- Looking for C++ include cmath
-- Looking for C++ include cmath - found
-- HDF5: Using hdf5 compiler wrapper to determine C configuration
-- Found HDF5: /usr/lib/libhdf5.so;/usr/lib/libsz.so;/usr/lib/libz.so;/usr/lib/libdl.so;/usr/lib/libm.so (found version "1.8.12")  
-- Looking for CL_VERSION_2_2
-- Looking for CL_VERSION_2_2 - found
-- Found OpenCL: /usr/lib/libOpenCL.so (found version "2.2") 
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/atom_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/beck_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/born_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/born_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/born_coul_long_cs_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/born_coul_wolf_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/born_coul_wolf_cs_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/buck_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/buck_coul_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/buck_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/charmm_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/colloid_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/coul_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/coul_debye_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/coul_dsf_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/coul_long_cs_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/device_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/dipole_lj_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/dipole_lj_sf_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/dipole_long_lj_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/dpd_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/eam_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/ellipsoid_nbor_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/gauss_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/lj_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/lj96_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/lj_class2_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/lj_coul_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/lj_coul_debye_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/lj_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/lj_coul_msm_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/lj_cubic_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/lj_dsf_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/lj_expand_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/lj_expand_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/lj_gromacs_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/lj_sdk_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/lj_sdk_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/mie_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/morse_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/neighbor_cpu_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/neighbor_gpu_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/pppm_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/soft_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/sw_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/table_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/ufm_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/vashishta_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/yukawa_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/yukawa_colloid_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/zbl_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/gayberne_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/gayberne_lj_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/re_squared_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/re_squared_lj_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/tersoff_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/tersoff_zbl_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu/tersoff_mod_cl.h...
-- Generating style_angle.h...
-- Generating style_atom.h...
-- Generating style_body.h...
-- Generating style_bond.h...
-- Generating style_command.h...
-- Generating style_compute.h...
-- Generating style_dihedral.h...
-- Generating style_dump.h...
-- Generating style_fix.h...
-- Generating style_improper.h...
-- Generating style_integrate.h...
-- Generating style_kspace.h...
-- Generating style_minimize.h...
-- Generating style_nbin.h...
-- Generating style_npair.h...
-- Generating style_nstencil.h...
-- Generating style_ntopo.h...
-- Generating style_pair.h...
-- Generating style_reader.h...
-- Generating style_region.h...
-- Generating packages_angle.h...
-- Generating packages_atom.h...
-- Generating packages_body.h...
-- Generating packages_bond.h...
-- Generating packages_command.h...
-- Generating packages_compute.h...
-- Generating packages_dihedral.h...
-- Generating packages_dump.h...
-- Generating packages_fix.h...
-- Generating packages_improper.h...
-- Generating packages_integrate.h...
-- Generating packages_kspace.h...
-- Generating packages_minimize.h...
-- Generating packages_nbin.h...
-- Generating packages_npair.h...
-- Generating packages_nstencil.h...
-- Generating packages_ntopo.h...
-- Generating packages_pair.h...
-- Generating packages_reader.h...
-- Generating packages_region.h...
-- Generating lmpinstalledpkgs.h...
-- Skipping building 'chain.x' with Ninja build tool due to lack of Fortran support
-- The Fortran compiler identification is GNU 4.8.5
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran  -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Found PythonInterp: /usr/bin/python3.6 (found version "3.6.8") 
-- Running test discovery...
-- Found 53 tests.
-- Building package: ASPHERE
-- Building package: BODY
-- Building package: CLASS2
-- Building package: COLLOID
-- Building package: CORESHELL
-- Building package: DIPOLE
-- Building package: GRANULAR
-- Building package: KSPACE
-- Building package: MANYBODY
-- Building package: MC
-- Building package: MESSAGE
-- Building package: MISC
-- Building package: MOLECULE
-- Building package: PERI
-- Building package: POEMS
-- Building package: QEQ
-- Building package: REPLICA
-- Building package: RIGID
-- Building package: SHOCK
-- Building package: SPIN
-- Building package: SNAP
-- Building package: SRD
-- Building package: KIM
-- Building package: PYTHON
-- Building package: VORONOI
-- Building package: USER-ATC
-- Building package: USER-BOCS
-- Building package: USER-CGDNA
-- Building package: USER-MESO
-- Building package: USER-CGSDK
-- Building package: USER-COLVARS
-- Building package: USER-DIFFRACTION
-- Building package: USER-DPD
-- Building package: USER-DRUDE
-- Building package: USER-EFF
-- Building package: USER-FEP
-- Building package: USER-H5MD
-- Building package: USER-MANIFOLD
-- Building package: USER-MEAMC
-- Building package: USER-MGPT
-- Building package: USER-MISC
-- Building package: USER-MOFFF
-- Building package: USER-PHONON
-- Building package: USER-PTM
-- Building package: USER-QTB
-- Building package: USER-REAXC
-- Building package: USER-SDPD
-- Building package: USER-SMTBQ
-- Building package: USER-SPH
-- Building package: USER-TALLY
-- Building package: USER-UEF
-- Building package: USER-YAFF
-- Building package: USER-OMP
-- Building package: OPT
-- Building package: GPU
-- The following packages have been found:
 * OpenMP
 * LAPACK
 * Threads
 * BLAS
 * JPEG
 * PNG
 * ZLIB
 * FFTW3
 * PythonLibs
 * VORO
 * PkgConfig
 * KIM-API
 * HDF5
 * OpenCL
 * PythonInterp
-- <<< Build configuration >>>
   Build type       
   Install path     /usr
   Compilers and Flags:
   C++ Compiler     /usr/bin/c++
       Type         GNU
       Version      4.8.5
   C++ Flags        -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp 
   Defines          LAMMPS_SMALLBIG;LAMMPS_MEMALIGN=64;LAMMPS_JPEG;LAMMPS_PNG;LAMMPS_GZIP;FFT_FFTW3;LMP_PYTHON;LMP_USER_OMP
-- Fortran Compiler /usr/bin/gfortran
           Type     GNU
           Version  4.8.5
   Fortran Flags    -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules 
-- C Compiler /usr/bin/cc
     Type     GNU
     Version  4.8.5
     C Flags  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp 
-- Linker flags:
   Executable      -Wl,-z,relro
-- Shared libraries  -Wl,-z,relro
-- Link libraries: mpi_stubs;/usr/lib/libjpeg.so;/usr/lib/libpng.so;/usr/lib/libz.so;/usr/lib/libfftw3.so;/usr/lib/libpython3.6m.so;/usr/lib/libvoro++.so;-lkim-api;cslib;m;poems;atc;colvars;h5md;gpu
-- GPU Api: OPENCL
-- OCL Tune: GENERIC
-- GPU Precision: MIXED
-- Using FFTW3 as primary FFT library
-- Using double precision FFTs
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:
    CMAKE_CXX_FLAGS_RELEASE
    CMAKE_C_FLAGS_RELEASE
    CMAKE_Fortran_FLAGS_RELEASE
    INCLUDE_INSTALL_DIR
    LIB_INSTALL_DIR
    SHARE_INSTALL_PREFIX
    SYSCONF_INSTALL_DIR
-- Build files have been written to: /builddir/build/BUILD/lammps-stable_7Aug2019/serial
+ /usr/bin/make -j4
/usr/bin/cmake3 -S/builddir/build/BUILD/lammps-stable_7Aug2019/cmake -B/builddir/build/BUILD/lammps-stable_7Aug2019/serial --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/progress.marks
/usr/bin/make -f CMakeFiles/Makefile2 all
make[1]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
/usr/bin/make -f CMakeFiles/msi2lmp.dir/build.make CMakeFiles/msi2lmp.dir/depend
/usr/bin/make -f CMakeFiles/chain.x.dir/build.make CMakeFiles/chain.x.dir/depend
/usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/depend
/usr/bin/make -f CMakeFiles/cslib.dir/build.make CMakeFiles/cslib.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/chain.x.dir/DependInfo.cmake --color=
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/msi2lmp.dir/DependInfo.cmake --color=
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/mpi_stubs.dir/DependInfo.cmake --color=
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/cslib.dir/DependInfo.cmake --color=
Scanning dependencies of target chain.x
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
/usr/bin/make -f CMakeFiles/chain.x.dir/build.make CMakeFiles/chain.x.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
Scanning dependencies of target mpi_stubs
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
/usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
[  0%] Building Fortran object CMakeFiles/chain.x.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f.o
/usr/bin/gfortran -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules -fPIE   -c /builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f -o CMakeFiles/chain.x.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f.o
[  0%] Building C object CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS/mpi.c.o
/usr/bin/cc -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS/mpi.c.o   -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS/mpi.c
Scanning dependencies of target msi2lmp
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
/usr/bin/make -f CMakeFiles/msi2lmp.dir/build.make CMakeFiles/msi2lmp.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
Scanning dependencies of target cslib
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
/usr/bin/make -f CMakeFiles/cslib.dir/build.make CMakeFiles/cslib.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/CheckLists.c.o
/usr/bin/cc -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/CheckLists.c.o   -c /builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/CheckLists.c
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:318.14:
      iseed = sseed                                                     
              1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:97.15:
          x2 = xboundlo + random(iseed)*xprd                            
               1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
[  0%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/cslib.cpp.o
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:98.15:
          y2 = yboundlo + random(iseed)*yprd                            
               1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:99.15:
          z2 = zboundlo + random(iseed)*zprd                            
               1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:132.21:
 10         xinner = 2.0*random(iseed) - 1.0                            
                     1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:133.21:
            yinner = 2.0*random(iseed) - 1.0                            
                     1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:134.21:
            zinner = 2.0*random(iseed) - 1.0                            
                     1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:147.17:
            x2 = x1 + xsurf*bondlength(iset)                            
                 1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:148.17:
            y2 = y1 + ysurf*bondlength(iset)                            
                 1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:149.17:
            z2 = z1 + zsurf*bondlength(iset)                            
                 1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/cslib.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/cslib.cpp
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/GetParameters.c.o
/usr/bin/cc -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/GetParameters.c.o   -c /builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/GetParameters.c
[  0%] Linking C static library libmpi_stubs.a
/usr/bin/cmake3 -P CMakeFiles/mpi_stubs.dir/cmake_clean_target.cmake
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/mpi_stubs.dir/link.txt --verbose=1
/usr/bin/ar qc libmpi_stubs.a  CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS/mpi.c.o
/usr/bin/ranlib libmpi_stubs.a
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
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[  0%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/cslib_wrap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/cslib_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/cslib_wrap.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/cslib.cpp: In member function 'void CSLIB_NS::CSlib::onefield(int, int, int&, int&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/cslib.cpp:649:26: warning: 'bigbytes' may be used uninitialized in this function [-Wmaybe-uninitialized]
   nbytes = (int) bigbytes;
                          ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/cslib_wrap.cpp:20:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
 static void MPI_Init(int *, char ***) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
 static void MPI_Comm_rank(MPI_Comm, int *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
 static void MPI_Comm_size(MPI_Comm, int *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
 static void MPI_Open_port(MPI_Info, char *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
 static void MPI_Close_port(const char *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_accept(const char *, MPI_Info, int, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_connect(const char *, MPI_Info, int, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_free(MPI_Comm *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
 static void MPI_Recv(void *, int, MPI_Datatype, int, int, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:73:13: warning: 'void CSLIB_NS::MPI_Bcast(void*, int, CSLIB_NS::MPI_Datatype, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Bcast(void *, int, MPI_Datatype, int, MPI_Comm) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
 static void MPI_Abort(MPI_Comm, int) {exit(1);}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
 static void MPI_Finalize() {}
             ^
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/InitializeItems.c.o
/usr/bin/cc -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/InitializeItems.c.o   -c /builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/InitializeItems.c
[  0%] Linking Fortran executable chain.x
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/chain.x.dir/link.txt --verbose=1
/usr/bin/gfortran  -Wl,-z,relro -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules CMakeFiles/chain.x.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f.o  -o chain.x -lgfortran -lm -lgcc_s -lgcc -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc -lm -lc 
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/cslib.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h: At global scope:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
 static void MPI_Init(int *, char ***) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
 static void MPI_Open_port(MPI_Info, char *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
 static void MPI_Close_port(const char *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_accept(const char *, MPI_Info, int, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_connect(const char *, MPI_Info, int, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_free(MPI_Comm *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
 static void MPI_Recv(void *, int, MPI_Datatype, int, int, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:73:13: warning: 'void CSLIB_NS::MPI_Bcast(void*, int, CSLIB_NS::MPI_Datatype, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Bcast(void *, int, MPI_Datatype, int, MPI_Comm) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
 static void MPI_Finalize() {}
             ^
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
[  0%] Built target chain.x
[  0%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/MakeLists.c.o
/usr/bin/cc -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/MakeLists.c.o   -c /builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/MakeLists.c
[  0%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg.cpp
[  0%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp: In member function 'virtual void CSLIB_NS::MsgFile::recv(int&, int*&, int&, char*&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp:125:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(lengths,sizeof(int),2,fp);
                                               ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
 static void MPI_Init(int *, char ***) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
 static void MPI_Open_port(MPI_Info, char *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
 static void MPI_Close_port(const char *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_accept(const char *, MPI_Info, int, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_connect(const char *, MPI_Info, int, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_free(MPI_Comm *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
 static void MPI_Recv(void *, int, MPI_Datatype, int, int, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:73:13: warning: 'void CSLIB_NS::MPI_Bcast(void*, int, CSLIB_NS::MPI_Datatype, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Bcast(void *, int, MPI_Datatype, int, MPI_Comm) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
 static void MPI_Finalize() {}
             ^
/usr/bin/make -f CMakeFiles/colvars.dir/build.make CMakeFiles/colvars.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/colvars.dir/DependInfo.cmake --color=
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp:132:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(header,sizeof(int),nheader,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp:135:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(buf,1,nbuf,fp);
                                    ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h: At global scope:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
 static void MPI_Init(int *, char ***) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
 static void MPI_Comm_rank(MPI_Comm, int *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
 static void MPI_Comm_size(MPI_Comm, int *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
 static void MPI_Open_port(MPI_Info, char *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
 static void MPI_Close_port(const char *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_accept(const char *, MPI_Info, int, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_connect(const char *, MPI_Info, int, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_free(MPI_Comm *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
 static void MPI_Recv(void *, int, MPI_Datatype, int, int, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
 static void MPI_Abort(MPI_Comm, int) {exit(1);}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
 static void MPI_Finalize() {}
             ^
[  0%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_one.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_one.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_one.cpp
Scanning dependencies of target colvars
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
/usr/bin/make -f CMakeFiles/colvars.dir/build.make CMakeFiles/colvars.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
[  0%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvar.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvar.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvar.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_one.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
 static void MPI_Init(int *, char ***) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
 static void MPI_Comm_rank(MPI_Comm, int *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
 static void MPI_Open_port(MPI_Info, char *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
 static void MPI_Close_port(const char *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_accept(const char *, MPI_Info, int, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_connect(const char *, MPI_Info, int, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_free(MPI_Comm *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
 static void MPI_Abort(MPI_Comm, int) {exit(1);}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
 static void MPI_Finalize() {}
             ^
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_two.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_two.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_two.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_two.cpp: In member function 'void CSLIB_NS::MsgMPITwo::init(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_two.cpp:60:39: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(port,MPI_MAX_PORT_NAME,fp);
                                       ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_two.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h: At global scope:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
 static void MPI_Init(int *, char ***) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
 static void MPI_Comm_rank(MPI_Comm, int *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
 static void MPI_Comm_size(MPI_Comm, int *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
 static void MPI_Recv(void *, int, MPI_Datatype, int, int, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
 static void MPI_Abort(MPI_Comm, int) {exit(1);}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
 static void MPI_Finalize() {}
             ^
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_zmq.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_zmq.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_zmq.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_zmq.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
 static void MPI_Init(int *, char ***) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
 static void MPI_Comm_rank(MPI_Comm, int *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
 static void MPI_Comm_size(MPI_Comm, int *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
 static void MPI_Open_port(MPI_Info, char *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
 static void MPI_Close_port(const char *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_accept(const char *, MPI_Info, int, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_connect(const char *, MPI_Info, int, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
 static void MPI_Comm_free(MPI_Comm *) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
 static void MPI_Recv(void *, int, MPI_Datatype, int, int, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type, 
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
 static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
 static void MPI_Abort(MPI_Comm, int) {exit(1);}
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
 static void MPI_Finalize() {}
             ^
[  1%] Linking CXX static library libcsnompi.a
/usr/bin/cmake3 -P CMakeFiles/cslib.dir/cmake_clean_target.cmake
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/cslib.dir/link.txt --verbose=1
/usr/bin/ar qc libcsnompi.a  CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/cslib.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/cslib_wrap.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_one.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_two.cpp.o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_zmq.cpp.o
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make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
[  1%] Built target cslib
[  1%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadCarFile.c.o
/usr/bin/cc -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadCarFile.c.o   -c /builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadCarFile.c
[  2%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadFrcFile.c.o
/usr/bin/cc -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadFrcFile.c.o   -c /builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadFrcFile.c
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/gpu.dir/DependInfo.cmake --color=
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadCarFile.c: In function 'ReadCarFile':
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadCarFile.c:101:8: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAX_LINE_LENGTH,CarF); /* Read header line */
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadCarFile.c:108:10: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAX_LINE_LENGTH,CarF); /* Comment line */
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadCarFile.c:109:10: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAX_LINE_LENGTH,CarF); /* Date stamp */
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadCarFile.c:110:11: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
     fscanf(CarF,"%*s %lf %lf %lf %lf %lf %lf %*s",
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadCarFile.c:124:10: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAX_LINE_LENGTH, CarF); /* Comment line */
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadCarFile.c:125:10: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAX_LINE_LENGTH, CarF); /* Date Stamp */
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadCarFile.c:146:10: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAX_LINE_LENGTH,CarF);
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadCarFile.c:180:10: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAX_LINE_LENGTH,CarF);
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadCarFile.c:189:13: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
       fscanf(CarF,"%s %lf %lf %lf %*s %d %s %s %lf",
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadCarFile.c:209:10: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAX_LINE_LENGTH,CarF);
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadCarFile.c:210:10: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAX_LINE_LENGTH,CarF);
          ^
[  2%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvaratoms.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvaratoms.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvaratoms.cpp
[  2%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadMdfFile.c.o
/usr/bin/cc -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadMdfFile.c.o   -c /builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadMdfFile.c
[  2%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/SearchAndFill.c.o
/usr/bin/cc -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/SearchAndFill.c.o   -c /builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/SearchAndFill.c
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/SearchAndFill.c: In function 'SearchAndFill':
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/SearchAndFill.c:114:10: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAX_LINE_LENGTH, FrcF);
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/SearchAndFill.c:119:8: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, MAX_LINE_LENGTH, FrcF);
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/SearchAndFill.c:121:10: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets( line, MAX_LINE_LENGTH, FrcF);
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/SearchAndFill.c:223:10: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
     fgets( line, MAX_LINE_LENGTH, FrcF);
          ^
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Scanning dependencies of target gpu
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make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp
[  2%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/msi2lmp.c.o
/usr/bin/cc -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/msi2lmp.c.o   -c /builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/msi2lmp.c
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  2%] Linking C executable msi2lmp
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/msi2lmp.dir/link.txt --verbose=1
/usr/bin/cc -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp  -Wl,-z,relro -rdynamic CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/CheckLists.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/GetParameters.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/InitializeItems.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/MakeLists.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadCarFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadFrcFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/ReadMdfFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/SearchAndFill.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/WriteDataFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/msi2lmp.c.o  -o msi2lmp -lm 
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:182:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (_ef_atom)
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:196:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
       if (_vf_atom)
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:231:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (_ef_atom)
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:250:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
       if (_vf_atom)
          ^
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp: In instantiation of 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:313:16:   required from here
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:224:7: warning: unused variable 'ii' [-Wunused-variable]
   int ii, vstart=0, iend=_inum;
       ^
[  2%] Built target msi2lmp
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/usr/bin/make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/poems.dir/DependInfo.cmake --color=
Scanning dependencies of target poems
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
/usr/bin/make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/build
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/colmatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/colmatrix.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  2%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/eulerparameters.cpp.o
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[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/inertialframe.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/inertialframe.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/inertialframe.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.cpp:17:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/joint.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/mixedjoint.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/mixedjoint.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.cpp:17:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/norm.cpp.o
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In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.h: In constructor 'TreeNode::TreeNode(const int&, TreeNode*, TreeNode*, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.h:36:6: warning: 'TreeNode::data' will be initialized after [-Wreorder]
  int data;
      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.h:32:12: warning:   'TreeNode* TreeNode::left' [-Wreorder]
  TreeNode *left;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.cpp:22:1: warning:   when initialized here [-Wreorder]
 TreeNode::TreeNode (const int & item, TreeNode *lptr,TreeNode *rptr,
 ^
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[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/point.cpp.o
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[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/prismaticjoint.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/prismaticjoint.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/prismaticjoint.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dpd.cpp:17:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/revolutejoint.cpp.o
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In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
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In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
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cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/atc.dir/DependInfo.cmake --color=
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[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Coupling.cpp.o
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[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingEnergy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingEnergy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingEnergy.cpp
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_restraint.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_restraint.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_restraint.cpp
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs_ext.cpp
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMass.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMass.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMass.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Coupling.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentum.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentum.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/usr/bin/make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/depend
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cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/h5md.dir/DependInfo.cmake --color=
Scanning dependencies of target h5md
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/usr/bin/make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/build
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[  7%] Building C object CMakeFiles/h5md.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/src/ch5md.c.o
/usr/bin/cc -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/h5md.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/src/ch5md.c.o   -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/src/ch5md.c
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_ext.cpp
[  7%] Linking C static library libh5md.a
/usr/bin/cmake3 -P CMakeFiles/h5md.dir/cmake_clean_target.cmake
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/h5md.dir/link.txt --verbose=1
/usr/bin/ar qc libh5md.a  CMakeFiles/h5md.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/src/ch5md.c.o
/usr/bin/ranlib libh5md.a
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[  7%] Built target h5md
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_angles.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_angles.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_angles.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentum.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentum.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color=
Scanning dependencies of target ocl_get_devices
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
[  7%] Building CXX object CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DUCL_OPENCL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp:25:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_coordnums.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_coordnums.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_coordnums.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long_ext.cpp
[  7%] Linking CXX executable ocl_get_devices
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/ocl_get_devices.dir/link.txt --verbose=1
/usr/bin/c++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp  -Wl,-z,relro -rdynamic CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp.o  -o ocl_get_devices -lOpenCL 
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
[  7%] Built target ocl_get_devices
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_ext.cpp
/usr/bin/make -f CMakeFiles/binary2txt.dir/build.make CMakeFiles/binary2txt.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/binary2txt.dir/DependInfo.cmake --color=
Scanning dependencies of target binary2txt
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
/usr/bin/make -f CMakeFiles/binary2txt.dir/build.make CMakeFiles/binary2txt.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
[  7%] Building CXX object CMakeFiles/binary2txt.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/binary2txt.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp: In function 'int main(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:97:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&ntimestep,sizeof(bigint),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:107:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&natoms,sizeof(bigint),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:108:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&triclinic,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:109:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&boundary[0][0],6*sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:110:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&xlo,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:111:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&xhi,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:112:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&ylo,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:113:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&yhi,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:114:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&zlo,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:115:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&zhi,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:117:32: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(&xy,sizeof(double),1,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:118:32: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(&xz,sizeof(double),1,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:119:32: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(&yz,sizeof(double),1,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:121:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&size_one,sizeof(int),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:122:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&nchunk,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:159:28: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(&n,sizeof(int),1,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:171:32: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(buf,sizeof(double),n,fp);
                                ^
[  7%] Linking CXX executable binary2txt
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/binary2txt.dir/link.txt --verbose=1
/usr/bin/c++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp  -Wl,-z,relro -rdynamic CMakeFiles/binary2txt.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp.o  -o binary2txt 
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
[  7%] Built target binary2txt
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_distances.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_distances.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_distances.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_gpath.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_gpath.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_gpath.cpp
[  8%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_protein.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_protein.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_protein.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_rotations.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_rotations.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_rotations.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_ext.cpp
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.cpp
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferPartitionOfUnity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferPartitionOfUnity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferPartitionOfUnity.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_ext.cpp
[  8%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvardeps.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvardeps.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvardeps.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferPartitionOfUnity.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomToMoleculeTransfer.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/BodyForce.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/BodyForce.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CBLattice.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CBLattice.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CBLattice.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_ext.cpp
[  8%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarmodule.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarmodule.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarmodule.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.cpp
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CauchyBorn.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CauchyBorn.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CauchyBorn.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf_ext.cpp
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CbPotential.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CbPotential.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CbPotential.cpp
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ChargeRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ChargeRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ChargeRegulator.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ConcentrationRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ConcentrationRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ConcentrationRegulator.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarparse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarparse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarparse.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp: In instantiation of 'void LAMMPS_AL::EAM<numtyp, acctyp>::loop(bool, bool) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp:533:16:   required from here
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp:448:14: warning: variable 'vflag' set but not used [-Wunused-but-set-variable]
   int eflag, vflag;
              ^
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ChargeRegulator.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ChargeRegulator.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronChargeDensity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronChargeDensity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronChargeDensity.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_alloy_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_alloy_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_alloy_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_alloy_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarproxy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarproxy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarproxy.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_ext.cpp
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronDragPower.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronDragPower.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronDragPower.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_fs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_fs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_fs_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_fs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarscript.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarscript.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarscript.cpp
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronFlux.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronFlux.cpp
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatCapacity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatCapacity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatCapacity.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.cpp:27:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvartypes.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvartypes.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvartypes.cpp
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatFlux.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatFlux.cpp
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarvalue.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarvalue.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarvalue.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.cpp
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronPhononExchange.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronPhononExchange.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronPhononExchange.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp: In member function 'void Lepton::CompiledExpression::compileExpression(const Lepton::ExpressionTreeNode&, std::vector<std::pair<Lepton::ExpressionTreeNode, int> >&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:91:49: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i = 0; i < node.getChildren().size(); i++) {
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:113:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             for (int i = 1; i < args.size(); i++)
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp: In member function 'double Lepton::CompiledExpression::evaluate() const':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:170:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i = 0; i < variablesToCopy.size(); i++)
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:175:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int step = 0; step < operation.size(); step++) {
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:180:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             for (int i = 0; i < args.size(); i++)
                                           ^
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionProgram.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long_ext.cpp
[ 12%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const std::vector<Lepton::ExpressionTreeNode>&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:40:55: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (operation->getNumArguments() != children.size())
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&, const Lepton::ExpressionTreeNode&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:47:55: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (operation->getNumArguments() != children.size())
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:53:55: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (operation->getNumArguments() != children.size())
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:58:55: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (operation->getNumArguments() != children.size())
                                                       ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Operation.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Operation.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Operation.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 12%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ParsedExpression.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ParsedExpression.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ParsedExpression.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.cpp
[ 12%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long_ext.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ParsedExpression Lepton::Parser::parse(const string&, const std::map<std::basic_string<char>, Lepton::CustomFunction*>&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:181:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             if (pos != tokens.size())
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:190:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         if (pos != tokens.size())
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ExpressionTreeNode Lepton::Parser::parsePrecedence(const std::vector<Lepton::ParseToken>&, int&, const std::map<std::basic_string<char>, Lepton::CustomFunction*>&, const std::map<std::basic_string<char>, Lepton::ExpressionTreeNode>&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:201:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (pos == tokens.size())
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:227:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:241:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
                                ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.cpp
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Linking CXX static library libcolvars.a
/usr/bin/cmake3 -P CMakeFiles/colvars.dir/cmake_clean_target.cmake
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/colvars.dir/link.txt --verbose=1
/usr/bin/ar qc libcolvars.a  CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvar.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvaratoms.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_abf.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_alb.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_histogram.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_meta.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_restraint.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_angles.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_coordnums.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_distances.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_gpath.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_protein.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_rotations.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvardeps.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvargrid.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarmodule.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarparse.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarproxy.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarscript.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvartypes.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarvalue.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Operation.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ParsedExpression.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp.o
/usr/bin/ranlib libcolvars.a
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.cpp
[ 12%] Built target colvars
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Element.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Element.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Element.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Interpolate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Interpolate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Interpolate.cpp
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Mesh.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Mesh.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Mesh.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_ext.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.h:9,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Function.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Function.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Function.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FundamentalAtomicQuantity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FundamentalAtomicQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FundamentalAtomicQuantity.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/GhostManager.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/GhostManager.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/GhostManager.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/InterscaleOperators.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/InterscaleOperators.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/InterscaleOperators.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.cpp:18:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KernelFunction.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KernelFunction.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KernelFunction.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_kernel.h:27:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.cpp:17:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.cpp:25:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KinetoThermostat.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KinetoThermostat.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KinetoThermostat.cpp
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Array.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Array2D.h:9,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.cpp
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.cpp:27:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KinetoThermostat.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KinetoThermostat.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MPI_Wrappers.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MPI_Wrappers.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MPI_Wrappers.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MPI_Wrappers.cpp:2:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Material.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Material.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Material.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft_ext.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MeshReader.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MeshReader.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MeshReader.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MoleculeSet.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MoleculeSet.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MoleculeSet.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp: In member function 'void ATC::OutputManager::read_restart_file(std::string, ATC::RESTART_LIST*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp:164:42: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&myVal,sizeof(double),1,fp);
                                          ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PaqAtcUtility.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PaqAtcUtility.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PaqAtcUtility.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.cpp:26:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm_ext.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm_ext.cpp:22:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta_ext.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h: At global scope:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl_ext.cpp.o
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In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
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                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
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[ 17%] Built target gpu
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PolynomialSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PolynomialSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PolynomialSolver.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PrescribedDataManager.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PrescribedDataManager.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PrescribedDataManager.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Quadrature.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Quadrature.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Quadrature.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SchrodingerSolver.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ThermalTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ThermalTimeIntegrator.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Thermostat.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Thermostat.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Thermostat.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeFilter.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeFilter.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeFilter.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SchrodingerSolver.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SchrodingerSolver.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeIntegrator.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ThermalTimeIntegrator.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ThermalTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/DenseVector.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ViscousStress.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ViscousStress.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ViscousStress.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Thermostat.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Thermostat.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationChargeDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationChargeDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationChargeDiffusion.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationDiffusion.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronContinuity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronContinuity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronContinuity.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronMomentum.cpp.o
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[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronTemperature.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronTemperature.cpp
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationMassDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationMassDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationMassDiffusion.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.h:11,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationMomentum.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/angle.cpp
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_zero.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_zero.cpp: In member function 'virtual void LAMMPS_NS::AngleZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_zero.cpp:131:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_hybrid.cpp: In member function 'virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_hybrid.cpp:337:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_hybrid.cpp:346:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_hybrid.cpp:349:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_body.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_body.cpp
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_charge.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_charge.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_charge.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom.cpp: In member function 'void LAMMPS_NS::Atom::data_atoms(int, char*, LAMMPS_NS::tagint, LAMMPS_NS::tagint, int, int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom.cpp:975:48: warning: 'iptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       imagedata = ((imageint) (atoi(values[iptr]) + IMGMAX) & IMGMASK) |
                                                ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_zero.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_hybrid.cpp:338:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_hybrid.cpp:347:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_hybrid.cpp:350:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_zero.cpp: In member function 'virtual void LAMMPS_NS::BondZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_zero.cpp:129:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/change_box.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/change_box.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/change_box.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/citeme.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_brick.cpp: In member function 'virtual void LAMMPS_NS::CommBrick::borders()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_brick.cpp:702:28: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int nsend,nrecv,sendflag,nfirst,nlast,ngroup;
                            ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_adf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_adf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_adf.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_aggregate_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_aggregate_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_aggregate_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_tiled.cpp: In member function 'void LAMMPS_NS::CommTiled::box_drop_brick(int, double*, double*, int&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_tiled.cpp:1496:17: warning: 'dir' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += dir;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_adf.cpp: In member function 'virtual void LAMMPS_NS::ComputeADF::init()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_adf.cpp:309:7: warning: 'x0' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int x0;
       ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_tiled.cpp: In member function 'virtual void LAMMPS_NS::CommTiled::borders()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_tiled.cpp:814:9: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
         for (i = atom->nlocal; i < nlast; i++) {
         ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angmom_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angmom_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angmom_chunk.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp: In member function 'int LAMMPS_NS::ComputeAngleLocal::compute_angles(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp:301:25: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ptr[n] = 180.0*theta/MY_PI;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp:309:17: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ivar++;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp:247:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp:245:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->angle_atom2[atom2][i]) continue;
                                       ^
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_centro_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_centro_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_centro_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_spread_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_spread_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_spread_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp: In member function 'int LAMMPS_NS::ComputeBondLocal::compute_bonds(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:400:28: warning: 'engrot' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engrot;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:397:28: warning: 'engvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engvib;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:403:30: warning: 'engtrans' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engtrans;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:391:28: warning: 'engpot' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engpot;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:406:34: warning: 'omegasq' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = sqrt(omegasq);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:409:26: warning: 'vvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = vvib;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:413:19: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ivar++;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:281:47: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         btype = onemols[imol]->bond_type[iatom][i];
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:281:29: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         btype = onemols[imol]->bond_type[iatom][i];
                             ^
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cna_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cna_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cluster_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cluster_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cluster_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin1d()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1514:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap < boxlo[idim]) xremap += prd[idim];
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1515:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap >= boxhi[idim]) xremap -= prd[idim];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1514:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap < boxlo[idim]) xremap += prd[idim];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin2d()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1616:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap < boxlo[jdim]) yremap += prd[jdim];
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1617:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap >= boxhi[jdim]) yremap -= prd[jdim];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1616:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap < boxlo[jdim]) yremap += prd[jdim];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin3d()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1749:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap < boxlo[kdim]) zremap += prd[kdim];
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1750:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap >= boxhi[kdim]) zremap -= prd[kdim];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1749:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap < boxlo[kdim]) zremap += prd[kdim];
                              ^
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com_chunk.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_contact_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_contact_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_contact_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp: In constructor 'LAMMPS_NS::ComputeChunkAtom::ComputeChunkAtom(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:415:29: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
         delta[idim] *= scale;
                             ^
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_coord_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_coord_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_coord_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_deprecated.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_displace_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_displace_atom.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_erotate_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_erotate_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_erotate_sphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_dihedral_local.cpp: In member function 'int LAMMPS_NS::ComputeDihedralLocal::compute_dihedrals(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_dihedral_local.cpp:319:17: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ivar++;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_dihedral_local.cpp:243:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_dihedral_local.cpp:242:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->dihedral_atom2[atom2][i]) continue;
                                       ^
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_erotate_sphere_atom.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration_chunk.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_global_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeGlobalAtom::compute_peratom()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_global_atom.cpp:517:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j >= 0 && j < vmax) array_atom[i][m] = source[j];
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_global_atom.cpp:448:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j >= 0 && j < vmax) array_atom[i][m] = source[j];
                             ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_inertia_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_inertia_chunk.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_improper_local.cpp: In member function 'int LAMMPS_NS::ComputeImproperLocal::compute_impropers(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_improper_local.cpp:162:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_improper_local.cpp:161:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->improper_atom2[atom2][i]) continue;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_improper_local.cpp:217:17: warning: 'cbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
           cbuf[n] = 180.0*acos(c)/MY_PI;
                 ^
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke_atom.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_atom.cpp
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_chunk.cpp
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_local.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_local.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_local.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_pressure.cpp: In member function 'virtual double LAMMPS_NS::ComputePressure::compute_scalar()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_pressure.cpp:257:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       scalar = (temperature->dof * boltz * t +
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_pressure.cpp: In member function 'virtual void LAMMPS_NS::ComputePressure::compute_vector()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_pressure.cpp:304:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
                               ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/create_bonds.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_box.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_box.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/create_box.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_atoms.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::add_random()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp:663:55: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp:663:31: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
                               ^
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_bonds.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp:224:46: warning: 'molseed' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ranmol = new RanMars(lmp,molseed+comm->me);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp:116:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"basis") == 0) {
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_bonds.cpp: In member function 'void LAMMPS_NS::CreateBonds::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_bonds.cpp:129:10: warning: 'style' may be used uninitialized in this function [-Wmaybe-uninitialized]
   } else if (style == SANGLE) {
          ^
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/deprecated.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_deprecated.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_zero.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/displace_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/displace_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/displace_atoms.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp:322:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp:331:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp:334:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_dcd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_dcd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_dcd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::box_too_small_check()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp:851:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp:851:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump.cpp: In member function 'virtual void LAMMPS_NS::Dump::write()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump.cpp:514:20: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->v = vhold;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump.cpp:513:20: warning: 'xhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->x = xhold;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump.cpp:515:28: warning: 'imagehold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->image = imagehold;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::image_check()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp:752:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp:752:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                         ^
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_deprecated.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_local.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_local.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_local.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp: In member function 'virtual int LAMMPS_NS::DumpCustom::count()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp:1031:30: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 (*ptr != 0.0 && value != 0.0))
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp:528:13: warning: 'values' may be used uninitialized in this function [-Wmaybe-uninitialized]
     double *values;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp:527:18: warning: 'ptrhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     double *ptr,*ptrhold;
                  ^
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_movie.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_movie.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_movie.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_xyz.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_xyz.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_xyz.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp: In member function 'void LAMMPS_NS::DumpImage::create_image()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:1033:66: warning: 'color2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:1027:66: warning: 'color1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             image->draw_cylinder(x[atom1],xmid,color1,diameter,3);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:968:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:968:41: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:831:55: warning: 'color' may be used uninitialized in this function [-Wmaybe-uninitialized]
       image->draw_cylinder(pt1,pt2,color,ldiamvalue,3);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:1036:72: warning: 'diameter' may be used uninitialized in this function [-Wmaybe-uninitialized]
         } else image->draw_cylinder(x[atom1],x[atom2],color,diameter,3);
                                                                        ^
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/error.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/error.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/error.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_adapt.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp: In member function 'void LAMMPS_NS::Finish::end(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp:773:33: warning: 'nneighfull' may be used uninitialized in this function [-Wmaybe-uninitialized]
     tmp = MAX(nneigh,nneighfull);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp:773:33: warning: 'nneigh' may be used uninitialized in this function [-Wmaybe-uninitialized]
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[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_atom.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_chunk.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_chunk.cpp: In member function 'virtual void LAMMPS_NS::FixAveChunk::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_chunk.cpp:1058:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp:538:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp:483:34: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
     values[lastindex][i] = scalar;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp:854:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp: In member function 'virtual void LAMMPS_NS::FixAveHistoWeight::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp:496:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_aveforce.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_aveforce.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_aveforce.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:701:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_vector(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:912:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_balance.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_balance.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_balance.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In member function 'int LAMMPS_NS::FixAveTime::column_length(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:972:9: warning: 'lengthone' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (lengthone != nrows)
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:630:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else vector[i] += scalar;
                             ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_box_relax.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_box_relax.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_box_relax.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_controller.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_controller.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_controller.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_balance.cpp: In member function 'void LAMMPS_NS::FixBalance::rebalance()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_balance.cpp:297:67: warning: 'sendproc' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (lbstyle == BISECTION) irregular->migrate_atoms(0,1,sendproc);
                                                                   ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In constructor 'LAMMPS_NS::FixAveTime::FixAveTime(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:412:9: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (value == -1)
         ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deprecated.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_external.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_external.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp: In constructor 'LAMMPS_NS::FixDeform::FixDeform(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp:183:18: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
         set[index].style = VARIABLE;
                  ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_gravity.cpp.o
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[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_group.cpp.o
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[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_nh.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_nh.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_nh.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_move.cpp: In member function 'virtual void LAMMPS_NS::FixMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_move.cpp:845:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_move.cpp:815:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_move.cpp:785:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
                                                             ^
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_nh_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_nh_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_nh_sphere.cpp
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_nph.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_recenter.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_recenter.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_respa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_respa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_respa.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_restrain.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_restrain.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_restrain.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_recenter.cpp: In member function 'virtual void LAMMPS_NS::FixRecenter::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_recenter.cpp:182:41: warning: 'bboxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_recenter.cpp:182:53: warning: 'bboxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]);
                                                     ^
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_setforce.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_setforce.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_setforce.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_spring.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_spring.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_spring.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_spring_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_spring_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_spring_chunk.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_restrain.cpp: In member function 'void LAMMPS_NS::FixRestrain::restrain_dihedral(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_restrain.cpp:565:33: warning: 'ddf1' may be used uninitialized in this function [-Wmaybe-uninitialized]
   df1 = df1*cos_target[m] - ddf1*sin_target[m];
                                 ^
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_spring_rg.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_vector.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_vector.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_viscous.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_viscous.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_viscous.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_vector.cpp: In constructor 'LAMMPS_NS::FixVector::FixVector(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_vector.cpp:149:26: warning: 'finalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
     extarray = finalvalue;
                          ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj93.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj93.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall.cpp: In constructor 'LAMMPS_NS::FixWall::FixWall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall.cpp:75:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_reflect.cpp.o
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[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/force.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/force.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/force.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_reflect.cpp: In constructor 'LAMMPS_NS::FixWallReflect::FixWallReflect(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_reflect.cpp:67:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/hashlittle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/hashlittle.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp:738:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&ngroup,sizeof(int),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp:750:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp:754:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(names[i],sizeof(char),n,fp);
                                                     ^
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance_group.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance_group.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance_group.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance_neigh.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance_neigh.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance_neigh.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp: In member function 'void LAMMPS_NS::Image::draw_cube(double*, double*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp:515:31: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
           tdir[2] = camDir[2] * t;
                               ^
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance_store.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_hybrid.cpp
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_zero.cpp
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/info.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/info.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/info.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_hybrid.cpp:319:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_hybrid.cpp:328:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_hybrid.cpp:331:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/input.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/lmppython.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp: In function 'void MathExtra::no_squish_rotate(int, double*, double*, double*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:260:52: warning: 'kq[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:260:39: warning: 'kq[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:260:26: warning: 'kq[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:260:13: warning: 'kq[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:271:28: warning: 'kp[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[3] = c_phi*p[3] + s_phi*kp[3];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:270:28: warning: 'kp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[2] = c_phi*p[2] + s_phi*kp[2];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:269:28: warning: 'kp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[1] = c_phi*p[1] + s_phi*kp[1];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:268:28: warning: 'kp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[0] = c_phi*p[0] + s_phi*kp[0];
                            ^
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_special.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/molecule.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/molecule.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/molecule.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1367:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1384:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1387:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(id_restart_global[i],sizeof(char),n,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1390:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1393:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(style_restart_global[i],sizeof(char),n,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1396:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1399:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(state_restart_global[i],sizeof(char),n,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1409:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nfix_restart_peratom,sizeof(int),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1426:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1429:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(id_restart_peratom[i],sizeof(char),n,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1432:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1435:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(style_restart_peratom[i],sizeof(char),n,fp);
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1438:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/nbin.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_stencil(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp:1673:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (newtflag) {
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_pair(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp:1781:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (newtflag) {
     ^
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_copy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_copy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_copy.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBin::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp:103:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp:101:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp:101:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_atomonly.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_atomonly.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_atomonly.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBinGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp:109:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp:107:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp:107:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp: In member function 'virtual void LAMMPS_NS::NPairFullMulti::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp:110:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp:108:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp:108:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsq::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp:104:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp:102:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp:102:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp:88:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_atomonly_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_atomonly_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_atomonly_newton.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsqGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp:103:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp:101:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp:101:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp:107:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp:105:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp:105:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp:115:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp:113:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp:113:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp:139:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp:137:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp:137:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp:113:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp:111:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp:111:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp:147:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp:145:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp:145:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp:122:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp:120:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp:120:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp:105:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp:103:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp:103:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp:89:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp:126:39: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (includegroup && !(mask[j] & bitmask)) continue;
                                       ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp:122:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp:120:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp:120:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp:90:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:173:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:131:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:129:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:129:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:151:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
               neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:20:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:71:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:219:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:177:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:175:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:175:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:152:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:20:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:70:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:219:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:220:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       numneigh_middle[i] = n_middle;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:218:29: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ilist_middle[inum] = i;
                             ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:181:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:139:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:137:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:137:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:159:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
               neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:20:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:71:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:168:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:129:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:127:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:127:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:147:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:75:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:113:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newtoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:188:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:148:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:146:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:146:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:167:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:77:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:116:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton_tri.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newtoff.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newton.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newtoff.cpp:77:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_halffull_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_halffull_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_halffull_newtoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newton.cpp:80:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_halffull_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_halffull_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_halffull_newton.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip.cpp
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_size.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_size.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_size.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipRespa::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp:149:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp:150:36: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       numneigh_middle[i] = n_middle;
                                    ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:223:67: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (posix_memalign(&ptr, LAMMPS_MEMALIGN, pagesize*sizeof(T)))
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp:61:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
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[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:280:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:284:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&AA[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:285:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&BB[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:286:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&aa[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:287:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:288:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&beta[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:289:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:319:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:320:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp: In member function 'void LAMMPS_NS::Pair::write_file(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:1675:5: warning: 'rsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (rsq < cutsq[itype][jtype]) {
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:1686:32: warning: 'q_hold' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (atom->q) atom->q = q_hold;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp: In member function 'virtual void LAMMPS_NS::Pair::init_tables(double, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:412:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (msmflag) ftable[i] = qqrd2e/r * fgamma;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:399:30: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
         etable[i] = qqrd2e/r * egamma;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:403:30: warning: 'derfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
         etable[i] = qqrd2e/r * derfc;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:413:61: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:413:56: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
           else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:332:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:336:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:337:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:338:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:339:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:340:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:341:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:372:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:373:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:374:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:375:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:363:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:367:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:368:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:369:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:371:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:372:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:404:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:405:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:406:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:407:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:408:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:362:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:366:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:367:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:368:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:369:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:371:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:403:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alf,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:404:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:405:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:406:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:407:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:165:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:161:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:162:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:166:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:161:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:484:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:485:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:479:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:480:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:479:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:168:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:165:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:169:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:486:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:487:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:481:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:482:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:481:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:310:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:314:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:315:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:316:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:317:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:346:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:347:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:348:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:349:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:366:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:371:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:372:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:373:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:374:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:405:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:406:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:407:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:408:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:409:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:467:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:467:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:146:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:146:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:247:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:250:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&cut[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:274:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:275:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:276:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDebye::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp:148:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp:149:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp:150:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp:151:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_streitz.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_streitz.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_streitz.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:255:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:279:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:280:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:281:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:282:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:251:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:275:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alf,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:276:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:277:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:278:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:315:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:316:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:315:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                         ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_deprecated.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:316:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:320:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:321:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:322:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:350:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&temperature,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:351:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:352:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:353:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:234:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:238:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:239:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:267:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_start,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:268:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_stop,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:269:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:270:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:271:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:282:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:286:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:287:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:288:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:315:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:316:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:317:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:676:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:699:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(compute_tally,sizeof(int),nstyles,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:704:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:707:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:713:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:717:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(special_lj[m],sizeof(double),4,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:720:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:724:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(special_coul[m],sizeof(double),4,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp: In member function 'virtual void LAMMPS_NS::PairHybridOverlay::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp:44:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int multflag;
       ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:608:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:612:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:613:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:614:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:643:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:644:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:645:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:646:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:279:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:283:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:284:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:285:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:286:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:313:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:399:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int multflag;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp: In member function 'virtual double LAMMPS_NS::PairLJCubic::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:345:32: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:342:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:130:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:127:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:390:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_lj*forcelj*r2inv;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:394:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:602:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:606:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:607:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:608:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:637:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:638:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:639:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:640:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:355:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:359:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:360:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:361:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:362:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:392:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:173:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:174:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:175:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:176:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:177:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:393:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:394:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:395:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:396:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDebye::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:215:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:211:71: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:211:53: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:451:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:109:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:109:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:112:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:138:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:384:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_lj*forcelj*r2inv;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:388:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:378:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:382:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:383:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:384:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:414:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:415:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:416:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:417:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:418:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:419:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:166:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:167:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:160:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:166:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:463:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:463:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:463:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:457:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:370:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:374:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:375:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:376:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:407:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alf,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:409:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:410:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:411:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:412:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:326:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:330:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:331:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:332:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shift[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:333:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:362:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:363:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:364:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:365:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:166:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:159:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:341:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:345:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:346:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:347:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:348:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:378:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:379:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:380:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:381:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:435:65: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:137:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:380:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:384:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:385:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:414:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:415:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:416:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_inner,sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:417:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:418:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:419:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:354:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:358:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:359:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:360:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:361:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:391:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:392:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:393:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:394:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacsCoulGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:501:51: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:497:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:490:38: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tc*tc*tc * (coulsw3 + coulsw4*tc);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp: In member function 'virtual double LAMMPS_NS::PairLJSmooth::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:452:30: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:451:60: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 -
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:447:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]) -
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:157:58: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoulswitch = tc*tc*tc * (coulsw3 + coulsw4*tc);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:167:59: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:163:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:163:46: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:142:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:141:68: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 -
                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:137:27: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
                           ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:285:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:289:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:290:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:291:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:318:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:319:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:629:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:633:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:634:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:635:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamR[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:636:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamA[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:637:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:668:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:669:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:670:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:671:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:267:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:271:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:272:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:273:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:274:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:302:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:303:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:304:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:392:46: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_mie*forcemie*r2inv;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:396:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:247:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:251:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&prefactor[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:252:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:277:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:278:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:979:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:980:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:981:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewaldflag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:982:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&pppmflag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:983:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&msmflag,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:984:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&dispersionflag,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:985:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tip4pflag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp: In member function 'virtual double LAMMPS_NS::PairTable::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:1044:41: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:1044:14: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:1041:35: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phi = tb->e[itable] + fraction*tb->de[itable];
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:178:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:178:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:175:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:281:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:285:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:286:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:287:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:315:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:316:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:317:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:255:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:259:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:260:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:287:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:288:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:289:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:290:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp:173:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp:177:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp:202:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp:203:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&coeffflag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp: In member function 'virtual void LAMMPS_NS::PairZBL::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp:131:53: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                                     ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/random_mars.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/random_mars.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/random_mars.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp: In member function 'virtual double LAMMPS_NS::PairZBL::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp:279:45: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                             ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/random_park.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/random_park.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/random_park.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp: In member function 'void LAMMPS_NS::ProcMap::output(char*, int*, int***)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp:693:16: warning: 'kme' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[5] = kme + 1;
                ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_data.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_data.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/read_data.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp:692:16: warning: 'jme' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[4] = jme + 1;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp:691:16: warning: 'ime' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[3] = ime + 1;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp: In member function 'int LAMMPS_NS::ProcMap::best_factors(int, int**, int*, int, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp:887:10: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return index;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp:576:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
                                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp:504:29: warning: 'valuehalf_select' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else lo[dim] = valuehalf;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute_old(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp:1068:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
                                                                         ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::seek(LAMMPS_NS::bigint, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp:283:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized]
   bigint ntimestep;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:305:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&flag,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:309:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&procsperfile,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:312:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:316:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&n,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:322:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(buf,sizeof(double),n,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:382:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&flag,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:385:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&procsperfile,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:394:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:398:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&n,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:404:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(buf,sizeof(double),n,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_layout()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:1104:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(all_written_send_sizes,sizeof(int),nprocs_file,fp);
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'char* LAMMPS_NS::ReadRestart::read_string()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:1286:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(value,sizeof(char),n,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_int_vec(int, int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:1298:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(vec,sizeof(int),n,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_double_vec(int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:1309:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(vec,sizeof(double),n,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::next(LAMMPS_NS::bigint, LAMMPS_NS::bigint, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp:423:5: warning: 'eofflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (eofflag) ntimestep = -1;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp:378:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized]
   bigint ntimestep;
          ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/reader.cpp.o
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[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cone.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cone.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cone.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region.cpp: In member function 'int LAMMPS_NS::Region::surface(double, double, double, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region.cpp:190:34: warning: 'xorig[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].delz = xorig[2] - zs;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region.cpp:189:34: warning: 'xorig[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].dely = xorig[1] - ys;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region.cpp:188:34: warning: 'xorig[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].delx = xorig[0] - xs;
                                  ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp: In member function 'virtual int LAMMPS_NS::RegBlock::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp:334:28: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
   add_contact(0,x,xp,yp,zp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp:334:28: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp:334:28: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_deprecated.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_intersect.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_intersect.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_intersect.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_plane.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_plane.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_plane.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp: In member function 'virtual int LAMMPS_NS::RegCylinder::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp:716:30: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     add_contact(0,x,xp,yp,zp);
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp:716:30: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp:716:30: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_prism.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/run.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/run.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/run.cpp: In member function 'void LAMMPS_NS::Run::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/run.cpp:172:41: warning: 'stop' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (stopflag) update->endstep = stop;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/run.cpp:170:45: warning: 'start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (startflag) update->beginstep = start;
                                             ^
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/set.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/special.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/special.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/special.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/thermo.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/thermo.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/thermo.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/set.cpp: In member function 'void LAMMPS_NS::Set::setrandom(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/set.cpp:1150:24: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized]
           quat[1] = 0.0;
                        ^
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/timer.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/timer.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/timer.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/universe.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/universe.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/universe.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp: In member function 'void LAMMPS_NS::LAMMPS::init_pkg_lists()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp:901:13: note: variable tracking size limit exceeded with -fvar-tracking-assignments, retrying without
 void _noopt LAMMPS::init_pkg_lists()
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/universe.cpp: In member function 'void LAMMPS_NS::Universe::reorder(char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/universe.cpp:148:38: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
   MPI_Comm_split(uorig,0,key,&uworld);
                                      ^
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/update.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/update.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/update.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/utils.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/utils.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/utils.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::next(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:685:33: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
       fscanf(fp,"%d",&nextindex);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp: In member function 'void LAMMPS_NS::Velocity::set(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:544:63: warning: 'zvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(zvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:539:63: warning: 'yvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(yvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:534:63: warning: 'xvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(xvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:457:17: warning: 'vz' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vz *= zscale;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:453:17: warning: 'vy' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vy *= yscale;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:449:17: warning: 'vx' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vx *= xscale;
                 ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:30:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/memory.h: In member function 'void LAMMPS_NS::Velocity::create(double, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/memory.h:171:5: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     sfree(array[0]);
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:165:12: note: 'vhold' was declared here
   double **vhold;
            ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/verlet.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/verlet.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/verlet.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp:901:13: note: variable tracking size limit exceeded
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_coeff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_coeff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/write_coeff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::group_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:3994:39: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
   } else argstack[nargstack++] = value;
                                       ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_data.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_data.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/write_data.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate_boolean(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:4764:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int op,opprevious,flag1,flag2;
       ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_dump.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/write_dump.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp: In constructor 'LAMMPS_NS::LAMMPS::LAMMPS(int, char**, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp:639:5: warning: 'wlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
     for (iarg = wfirst; iarg < wlast; iarg++)
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp:165:7: warning: 'wfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int wfirst,wlast;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:4068:20: warning: 'nstride' may be used uninitialized in this function [-Wmaybe-uninitialized]
     int index,nvec,nstride;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:4211:7: warning: 'nvec' may be used uninitialized in this function [-Wmaybe-uninitialized]
       for (int i = 0; i < nvec; i++) {
       ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_restart.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/write_restart.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate(char*, LAMMPS_NS::Variable::Tree**, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:1186:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int op,opprevious;
       ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_temp_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_temp_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_temp_asphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp: In member function 'virtual double LAMMPS_NS::ComputeERotateAsphere::compute_scalar()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp:138:35: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertia[0] = tbonus[tri[i]].inertia[0];
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp:129:32: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         length = lbonus[line[i]].length;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp:108:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nh_asphere.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nph_asphere.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_npt_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_npt_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_npt_asphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'void LAMMPS_NS::Variable::compute_atom(int, int, double*, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:964:11: warning: 'vstore' may be used uninitialized in this function [-Wmaybe-uninitialized]
   double *vstore;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::math_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:3746:37: warning: 'value2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       double value = value1 + value2*(1.0-cos(omega*delta*update->dt));
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:3412:42: warning: 'value1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       argstack[nargstack++] = sqrt(value1);
                                          ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nve_asphere.cpp.o
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[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nve_line.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nve_asphere_noforce.cpp: In member function 'virtual void LAMMPS_NS::FixNVEAsphereNoforce::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nve_asphere_noforce.cpp:88:33: warning: 'bonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = bonus[ellipsoid[i]].shape;
                                 ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:463:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:466:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:470:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:474:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:475:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:476:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:508:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gamma,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:509:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&upsilon,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:510:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:511:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:512:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:513:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:441:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:444:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:448:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:452:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:453:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:454:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:482:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:483:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_line_lj.cpp: In member function 'virtual void LAMMPS_NS::PairLineLJ::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_line_lj.cpp:304:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_nparticle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_nparticle.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp: In member function 'double LAMMPS_NS::PairGayBerne::gayberne_analytic(int, int, double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double*, double, double*, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:726:36: warning: 'deta2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:725:36: warning: 'deta2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:724:36: warning: 'deta2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:726:21: warning: 'dchi2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:725:21: warning: 'dchi2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:724:21: warning: 'dchi2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:726:51: warning: '*((void*)& dUr2 +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:725:51: warning: '*((void*)& dUr2 +8)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:724:51: warning: 'dUr2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp: In member function 'virtual void LAMMPS_NS::PairTriLJ::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp:378:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:216:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polygon.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polygon.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_body_local.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_body_local.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_body_local.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::BodyRoundedPolyhedron::data_body(int, int, int, int*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp:216:7: warning: 'nedges' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int nedges,nentries;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:191:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_temp_body.cpp.o
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[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_nh_body.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_nparticle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_nparticle.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:244:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable]
       int interact, num_contacts, done;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polygon.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolygon::post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polygon.cpp:337:60: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
                           contact_list, num_contacts, facc);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:14: warning: variable 'rsqinv' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:33: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polygon.cpp:299:9: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (delr > eradi) dz = cylradius;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:39: warning: variable 'eradj' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:45: warning: variable 'rradi' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:51: warning: variable 'rradj' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolygon::sphere_against_sphere(int, int, double, double, double, double, double, double, double**, double**, double**, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:601:10: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
   double eradi,eradj,rradi,rradj;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:601:16: warning: variable 'eradj' set but not used [-Wunused-but-set-variable]
   double eradi,eradj,rradi,rradj;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:603:32: warning: variable 'fn' set but not used [-Wunused-but-set-variable]
   double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:603:38: warning: variable 'ft' set but not used [-Wunused-but-set-variable]
   double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolygon::vertex_against_edge(int, int, double, double, double**, double**, double**, LAMMPS_NS::tagint*, LAMMPS_NS::PairBodyRoundedPolygon::Contact*, int&, double&, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:706:24: warning: variable 'nei' set but not used [-Wunused-but-set-variable]
   int ni, npi, ifirst, nei, iefirst;
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:706:29: warning: variable 'iefirst' set but not used [-Wunused-but-set-variable]
   int ni, npi, ifirst, nei, iefirst;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:707:11: warning: variable 'npj' set but not used [-Wunused-but-set-variable]
   int nj, npj, jfirst, nej, jefirst;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:708:32: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
   double xpi[3], xpj[3], dist, eradi, eradj, rradi, rradj;
                                ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolyhedron::post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polyhedron.cpp:357:58: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         contact_list, num_contacts, facc);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_nparticle.cpp: In member function 'virtual void LAMMPS_NS::PairBodyNparticle::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_nparticle.cpp:325:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:274:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable]
       int interact, num_contacts;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolyhedron::sanity_check()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:2344:22: warning: variable 'x3' set but not used [-Wunused-but-set-variable]
   double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:2344:28: warning: variable 'x4' set but not used [-Wunused-but-set-variable]
   double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:375:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:376:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:377:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:378:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:380:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_k[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:381:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:382:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:384:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:385:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:386:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:387:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:106:15: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int nei,nej,iefirst,jefirst;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:106:7: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int nei,nej,iefirst,jefirst;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:105:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:105:13: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp: In member function 'virtual void LAMMPS_NS::BondClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp:185:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp:186:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp:187:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp:188:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp: In member function 'virtual void LAMMPS_NS::DihedralClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:838:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:839:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:840:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:841:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:842:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:843:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:845:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:846:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:847:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:848:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_r0[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:850:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:851:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:852:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:853:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_r0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:855:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:856:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:857:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:858:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_r0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:860:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:861:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:862:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:863:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:865:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:866:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:867:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:868:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:870:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:871:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:872:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:874:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:875:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_r10[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:876:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_r30[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp: In member function 'virtual void LAMMPS_NS::ImproperClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:607:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:608:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi0[1],sizeof(double),atom->nimpropertypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:610:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k1[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:611:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k2[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:612:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k3[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:613:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_1[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:614:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_2[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:615:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_3[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:613:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:617:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:618:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:619:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:648:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:649:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:650:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:651:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp: In member function 'void LAMMPS_NS::ImproperClass2::angleangle(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:823:58: warning: 'eimproper' may be used uninitialized in this function [-Wmaybe-uninitialized]
                delxBD-delxBC,delyBD-delyBC,delzBD-delzBC);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:218:21: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (r > eradi + eradj + cut_inner) continue;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:121:43: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:121:35: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:121:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:121:13: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:393:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_lj*forcelj*r2inv;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:397:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/fix_wall_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/fix_wall_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/fix_wall_colloid.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:369:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:370:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:371:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:372:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:402:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:403:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:404:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:405:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:406:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:808:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:812:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:813:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:814:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:845:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:846:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:847:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:848:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:849:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:850:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:851:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:463:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:463:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:143:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:143:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:940:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:940:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:933:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:933:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:936:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:931:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:605:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:609:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:610:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:645:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:646:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:647:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagfld,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:648:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:649:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:650:42: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_target, sizeof(double),1,fp);
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:651:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed, sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:652:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:653:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:654:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:655:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:539:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:513:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:539:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:539:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:545:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:542:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:179:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:184:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:187:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:187:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:181:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:181:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:304:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_pu);
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:236:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_sh);
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp: In member function 'virtual void LAMMPS_NS::PairBrownianPoly::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp:290:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_pu);
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp:239:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_sh);
                                          ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:397:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (comm->me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:401:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a12[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:402:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:403:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d1[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:404:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:405:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:435:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:436:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:437:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual double LAMMPS_NS::PairColloid::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:540:20: warning: 'phi' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return factor_lj*phi;
                    ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU_poly.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:191:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       f[i][2] += delz*fpair;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:685:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:689:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:690:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:723:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:724:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:725:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagfld,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:726:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:727:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:728:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:729:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:730:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:731:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1911:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1915:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1916:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1948:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1949:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1950:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1951:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1952:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1953:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1954:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1955:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate_poly.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_yukawa_colloid.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSFCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:141:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:137:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:138:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:142:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:137:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp.o
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[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:178:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:170:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:175:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:179:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:172:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:172:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_wolf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_wolf_cs.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolfCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:141:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:138:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:142:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:176:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:168:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:173:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:176:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:170:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:170:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/atom_vec_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/atom_vec_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/atom_vec_dipole.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp:157:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp:162:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp:159:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp:159:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:526:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:502:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:526:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:526:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:532:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:529:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:440:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:444:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:445:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:446:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:447:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:476:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:477:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:478:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:479:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:493:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:497:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:498:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:499:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:527:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:528:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:529:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:530:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:169:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:174:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:178:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:171:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:171:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:239:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:237:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:235:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:235:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:239:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:244:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:70: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:54: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:47: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:31: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:70: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:54: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:300:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:347:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:351:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_read[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:352:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_read[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:353:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:382:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:383:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:384:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:385:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:386:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_freeze.cpp.o
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_freeze.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_freeze.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran_region.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran_region.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran_region.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hertz_history.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp: In member function 'virtual void LAMMPS_NS::FixPour::pre_exchange()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp:679:42: warning: 'natom' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ninserted_mols = ninserted_atoms / natom;
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp:695:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
       atom->nbonds += onemols[imol]->nbonds * ninserted_mols;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp:653:65: warning: 'denstmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
           atom->rmass[n] = 4.0*MY_PI/3.0 * radtmp*radtmp*radtmp * denstmp;
                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp:502:30: warning: 'radtmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
         coords[0][3] = radtmp;
                              ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp: In member function 'void LAMMPS_NS::FixWallGran::granular(double, double, double, double, double*, double, double*, double*, double*, double*, double, double, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1363:49: warning: 'relrot3' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1363:36: warning: 'relrot2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1363:23: warning: 'relrot1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1172:55: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
   damp_normal_prefactor = normal_coeffs[1]*damp_normal;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1203:23: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
     F_pulloff = 4*M_PI*coh*Reff;
                       ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:543:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:569:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kn,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:570:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kt,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:571:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gamman,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:572:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gammat,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:573:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&xmu,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:574:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&dampflag,sizeof(int),1,fp);
                                      ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1253:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1257:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&normal_model[i][j],sizeof(int),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1258:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&damping_model[i][j],sizeof(int),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1259:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&tangential_model[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1260:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&roll_model[i][j],sizeof(int),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1261:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&twist_model[i][j],sizeof(int),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1262:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(normal_coeffs[i][j],sizeof(double),4,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1263:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(tangential_coeffs[i][j],sizeof(double),3,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1264:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(roll_coeffs[i][j],sizeof(double),3,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1265:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(twist_coeffs[i][j],sizeof(double),3,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1266:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cutoff_type[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp: In member function 'virtual void LAMMPS_NS::EwaldDipole::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp:506:16: warning: unused variable 'vk' [-Wunused-variable]
     double uk, vk;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp:413:18: warning: unused variable 'partial2' [-Wunused-variable]
   double partial,partial2,partial_peratom;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp: In member function 'void LAMMPS_NS::EwaldDipole::slabcorr()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp:780:12: warning: unused variable 'x' [-Wunused-variable]
   double **x = atom->x;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp:781:10: warning: unused variable 'zprd' [-Wunused-variable]
   double zprd = domain->zprd;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual double LAMMPS_NS::PairGranular::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1644:27: warning: 'magtortwist' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[8] = magtortwist;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1642:19: warning: 'fr3' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[6] = fr3;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1641:19: warning: 'fr2' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[5] = fr2;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1640:19: warning: 'fr1' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[4] = fr1;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1643:18: warning: 'fr' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[7] = fr;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1615:49: warning: 'relrot3' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1615:36: warning: 'relrot2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1615:23: warning: 'relrot1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1626:55: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtortwist = -k_twist*history[twist_history_index] - damp_twist*magtwist;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1461:69: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
   damp_normal_prefactor = normal_coeffs[itype][jtype][1]*damp_normal;
                                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1436:40: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
     sqrt3 = MAX(0, 4*dR - t5 + SIXROOT6*coh*MY_PI*R2/(E*t6));
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1436:50: warning: 'R2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     sqrt3 = MAX(0, 4*dR - t5 + SIXROOT6*coh*MY_PI*R2/(E*t6));
                                                  ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:382:49: warning: 'allhistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
           history = &allhistory[size_history*jj];
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:452:71: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
             shrmag = sqrt(history[0]*history[0] + history[1]*history[1] +
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:168:8: warning: 'touch' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *touch,**firsttouch;
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:389:30: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
           F_pulloff = 4*MY_PI*coh*Reff;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:353:75: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
         damp_normal_prefactor = normal_coeffs[itype][jtype][1]*damp_normal;
                                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:226:34: warning: 'firsthistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
       allhistory = firsthistory[i];
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:225:27: warning: 'firsttouch' may be used uninitialized in this function [-Wmaybe-uninitialized]
       touch = firsttouch[i];
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp: In member function 'virtual void LAMMPS_NS::EwaldDipoleSpin::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:485:16: warning: unused variable 'vk' [-Wunused-variable]
     double uk, vk;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp: In member function 'void LAMMPS_NS::EwaldDipoleSpin::slabcorr()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:766:12: warning: unused variable 'x' [-Wunused-variable]
   double **x = atom->x;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:767:10: warning: unused variable 'zprd' [-Wunused-variable]
   double zprd = domain->zprd;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:772:10: warning: unused variable 'spx' [-Wunused-variable]
   double spx,spy,spz;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:772:14: warning: unused variable 'spy' [-Wunused-variable]
   double spx,spy,spz;
              ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_disp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_disp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:920:79: warning: 'normal_coeffs_one[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         normal_coeffs[i][j][0] = normal_coeffs[j][i][0] = normal_coeffs_one[0];
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:912:61: warning: 'normal_coeffs_one[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       normal_coeffs[i][j][1] = normal_coeffs[j][i][1] = damp;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:918:60: warning: 'normal_coeffs_one[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                     poiss[i][j],poiss[i][j]);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:923:79: warning: 'normal_coeffs_one[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         normal_coeffs[i][j][3] = normal_coeffs[j][i][3] = normal_coeffs_one[3];
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp: In member function 'virtual void LAMMPS_NS::EwaldDipoleSpin::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:430:27: warning: 'partial2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       tk[i][0] += partial2*eg[k][0];
                           ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual double LAMMPS_NS::PairGranular::init_one(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1213:10: warning: 'cutoff' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return cutoff;
          ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d_wrap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d_wrap.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp: In function 'void fft_3d(double (*)[2], double (*)[2], int, fft_plan_3d*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp:69:9: warning: variable 'total' set but not used [-Wunused-but-set-variable]
   int i,total,length,offset,num;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp:69:15: warning: variable 'length' set but not used [-Wunused-but-set-variable]
   int i,total,length,offset,num;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp:69:22: warning: unused variable 'offset' [-Wunused-variable]
   int i,total,length,offset,num;
                      ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fix_tune_kspace.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fix_tune_kspace.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fix_tune_kspace.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/gridcomm.cpp.o
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[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:424:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:428:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:429:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:430:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:431:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:432:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:433:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:467:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:468:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:469:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:470:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:471:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:472:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:473:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:565:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:566:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:558:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:558:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:561:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:556:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:188:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:180:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:185:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:189:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:182:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:182:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:182:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:179:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:178:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:183:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:241:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:242:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:237:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:236:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:402:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:406:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:407:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:409:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:441:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:442:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:443:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:444:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:445:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:446:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:447:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:537:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:537:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:530:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:530:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:533:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:528:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:182:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:174:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:179:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:182:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:176:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:176:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:178:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:175:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:174:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:178:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:236:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:236:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:232:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:231:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp: In member function 'virtual void LAMMPS_NS::MSM::direct(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1640:47: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v5sum += v5_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1639:47: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v4sum += v4_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1638:47: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v3sum += v3_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1637:47: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v2sum += v2_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1636:47: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v1sum += v1_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1635:47: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v0sum += v0_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:358:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:362:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_a_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:363:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_rho_read[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:364:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_c_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_buck_read[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:397:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_buck_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:398:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:399:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:400:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:401:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:402:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:403:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:292:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:295:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&scale[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:321:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:322:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:323:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:324:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:325:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:372:29: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:374:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:374:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:372:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:156:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:161:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:158:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:158:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:143:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:138:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:140:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp: In member function 'void LAMMPS_NS::MSM::direct_top(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1995:50: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v5sum += v5_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:140:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1994:50: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v4sum += v4_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1993:50: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v3sum += v3_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1992:50: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v2sum += v2_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1991:50: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v1sum += v1_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1990:50: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v0sum += v0_direct_top[k] * qtmp2;
                                                  ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:198:31: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:200:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:200:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:198:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:825:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:829:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:830:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:831:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:832:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:864:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:865:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:866:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:867:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:868:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:869:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:870:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:377:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:405:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * fgamma;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:377:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:411:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:408:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:969:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:961:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:961:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:964:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:959:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:514:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:506:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:506:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:509:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:504:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*egamma;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:208:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:203:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:205:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:205:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:544:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:516:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:544:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:544:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:550:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:547:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:892:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:896:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:897:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:898:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:899:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:931:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:932:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:193:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:933:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:198:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:202:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:934:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:195:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:935:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:195:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:936:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:202:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:937:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1045:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       philj6 = -lj4[itype][jtype]*r6inv +
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1040:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1028:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1028:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1031:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1026:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:796:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:800:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:801:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:802:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:833:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:834:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:835:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:836:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:837:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:838:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:839:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:604:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:567:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:604:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:604:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:610:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:607:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:930:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:922:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:922:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:925:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:920:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:214:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:219:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:235:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl6 = -lj4[itype][jtype]*r6inv +
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:216:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:216:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:233:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl12 = r6inv*lj3[itype][jtype]*r6inv -
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:354:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:378:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * fgamma;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:354:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:384:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:381:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:533:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:509:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:533:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:533:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:539:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:536:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:464:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:456:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:456:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:459:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:454:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*egamma;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:198:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:193:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:202:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:195:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:195:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:180:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:185:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:189:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:182:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:182:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:531:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:532:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:533:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:534:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:535:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:537:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:538:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:539:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:540:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:541:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:542:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:543:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:358:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:362:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_read[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:363:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_read[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:364:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:395:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:396:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:397:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:398:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:399:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:400:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:401:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:409:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:414:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:411:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:404:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:403:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:331:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:327:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:411:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1542:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1543:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1544:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1545:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1546:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1548:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1549:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1550:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1551:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1552:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1553:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:470:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:471:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:472:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:473:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:474:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:377:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:382:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:379:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:372:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:371:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:299:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:295:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:379:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_middle()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:974:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:970:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:943:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:939:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:445:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:450:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:447:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:440:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:439:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:367:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:363:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:447:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_cg.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_cg.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_inner()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:713:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:709:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:682:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:678:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1415:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1414:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1316:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1312:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h: In constructor 'LAMMPS_NS::PPPMDipole::PPPMDipole(LAMMPS_NS::LAMMPS*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:63:55: warning: 'LAMMPS_NS::PPPMDipole::uz_brick_dipole' will be initialized after [-Wreorder]
   FFT_SCALAR ***ux_brick_dipole,***uy_brick_dipole,***uz_brick_dipole;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:61:17: warning:   'FFT_SCALAR*** LAMMPS_NS::PPPMDipole::vdxx_brick_dipole' [-Wreorder]
   FFT_SCALAR ***vdxx_brick_dipole,***vdyy_brick_dipole,***vdzz_brick_dipole;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:60:1: warning:   when initialized here [-Wreorder]
 PPPMDipole::PPPMDipole(LAMMPS *lmp) : PPPM(lmp),
 ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:62:17: warning: 'LAMMPS_NS::PPPMDipole::vdxy_brick_dipole' will be initialized after [-Wreorder]
   FFT_SCALAR ***vdxy_brick_dipole,***vdxz_brick_dipole,***vdyz_brick_dipole;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:61:38: warning:   'FFT_SCALAR*** LAMMPS_NS::PPPMDipole::vdyy_brick_dipole' [-Wreorder]
   FFT_SCALAR ***vdxx_brick_dipole,***vdyy_brick_dipole,***vdzz_brick_dipole;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:60:1: warning:   when initialized here [-Wreorder]
 PPPMDipole::PPPMDipole(LAMMPS *lmp) : PPPM(lmp),
 ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:62:59: warning: 'LAMMPS_NS::PPPMDipole::vdyz_brick_dipole' will be initialized after [-Wreorder]
   FFT_SCALAR ***vdxy_brick_dipole,***vdxz_brick_dipole,***vdyz_brick_dipole;
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:61:59: warning:   'FFT_SCALAR*** LAMMPS_NS::PPPMDipole::vdzz_brick_dipole' [-Wreorder]
   FFT_SCALAR ***vdxx_brick_dipole,***vdyy_brick_dipole,***vdzz_brick_dipole;
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:60:1: warning:   when initialized here [-Wreorder]
 PPPMDipole::PPPMDipole(LAMMPS *lmp) : PPPM(lmp),
 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp: In member function 'virtual void LAMMPS_NS::PPPMDipole::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:537:13: warning: unused variable 'q' [-Wunused-variable]
     double *q = atom->q;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:540:9: warning: unused variable 'ntotal' [-Wunused-variable]
     int ntotal = nlocal;
         ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp: In member function 'double LAMMPS_NS::PPPMDipole::compute_qopt_dipole()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:929:10: warning: variable 'cnx' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:929:14: warning: variable 'cny' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:929:18: warning: variable 'cnz' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:932:10: warning: variable 'numerator' set but not used [-Wunused-but-set-variable]
   double numerator,denominator;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:933:13: warning: unused variable 'u2' [-Wunused-variable]
   double u1,u2,u3,sqk;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:933:16: warning: unused variable 'u3' [-Wunused-variable]
   double u1,u2,u3,sqk;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp: In member function 'void LAMMPS_NS::PPPMDipole::compute_gf_dipole()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:1024:10: warning: variable 'cnx' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:1024:14: warning: variable 'cny' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:1024:18: warning: variable 'cnz' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:1027:10: warning: variable 'numerator' set but not used [-Wunused-but-set-variable]
   double numerator,denominator;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp: In member function 'virtual void LAMMPS_NS::PPPMDipole::slabcorr()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:2392:12: warning: unused variable 'x' [-Wunused-variable]
   double **x = atom->x;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:2393:10: warning: unused variable 'zprd' [-Wunused-variable]
   double zprd = domain->zprd;
          ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_disp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_disp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp: In member function 'virtual void LAMMPS_NS::PPPMDipoleSpin::slabcorr()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp:666:12: warning: unused variable 'x' [-Wunused-variable]
   double **x = atom->x;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp:667:10: warning: unused variable 'zprd' [-Wunused-variable]
   double zprd = domain->zprd;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp:672:10: warning: unused variable 'spx' [-Wunused-variable]
   double spx,spy,spz;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp:672:14: warning: unused variable 'spy' [-Wunused-variable]
   double spx,spy,spz;
              ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_disp_tip4p.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_disp_tip4p.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_disp_tip4p.cpp
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_stagger.cpp.o
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[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/fix_qeq_comb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/fix_qeq_comb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/fix_qeq_comb.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_adp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_adp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_adp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/fix_qeq_comb.cpp: In member function 'virtual void LAMMPS_NS::FixQEQComb::post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/fix_qeq_comb.cpp:163:32: warning: 'ilist' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,ii,iloop,loopmax,inum,*ilist;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/fix_qeq_comb.cpp:163:26: warning: 'inum' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,ii,iloop,loopmax,inum,*ilist;
                          ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:3394:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:3395:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo_morse.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_adp.cpp:629:66: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fp,filename,file->nr,&file->z2r[i][j][1]);
                                                                  ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp: In member function 'virtual void LAMMPS_NS::PairATM::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp:313:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp:316:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&nu[i][j][k],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp: In member function 'virtual void LAMMPS_NS::PairATM::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp:341:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp:342:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_triple,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::TORSION(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:1236:64: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ev_tally4(i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl);
                                                                ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp: In member function 'void LAMMPS_NS::PairBOP::read_table(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:4979:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);  // skip first comment line
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:4980:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:4985:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5014:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5082:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);  // skip first comment line
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5084:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5086:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5090:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5095:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5099:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5101:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5103:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5112:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5119:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5123:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5127:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5129:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5133:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5135:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5139:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5141:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5145:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5147:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5151:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5153:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5157:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5159:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5161:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5170:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5177:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5185:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5193:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5201:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5208:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5212:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5229:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Spbicubic(double, double, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:4171:49: warning: 'yn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (j > 0) df[1] += c * ((double) j) * xn * yn1;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Sptricubic(double, double, double, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:4211:46: warning: 'zn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (k > 0) df[2] += c * kr * xn * yn * zn1;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5220:5: warning: 'nws' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(nws==3) {
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:4965:13: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,j,k,n,m;
             ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::read_lib()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:326:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:327:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:338:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:350:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:358:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:366:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:375:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLIB,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:384:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:391:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLIB,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:404:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:422:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:431:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
              fgets(s,MAXLIB,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:446:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:464:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:473:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(s,MAXLIB,fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:488:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:506:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:515:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(s,MAXLIB,fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::FLJ(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:806:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair = dC*dwij / rij;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:850:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:845:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:845:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:850:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:821:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:817:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkjS / rikS;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:840:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:845:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:850:45: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:845:45: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:821:40: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:840:45: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:876:76: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
             v_tally4(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS);
                                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:876:76: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::comb_zetaterm_d(double, double, double, double, double, double*, double, double*, double, double*, double*, double*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:2309:44: warning: 'com6' may be used uninitialized in this function [-Wmaybe-uninitialized]
             {com6+=prefac_ij2*pcrossk*dfc_k;}
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::force_zeta(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double, double, double, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, int, double&, double, double, int, int, int, double, double, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:1794:48: warning: 'prady' may be used uninitialized in this function [-Wmaybe-uninitialized]
      prady  += 1.0 *  btor[2] * bbtor * att_eng;
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:1793:48: warning: 'pradx' may be used uninitialized in this function [-Wmaybe-uninitialized]
      pradx  += 1.0 *  btor[1] * bbtor * att_eng;
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp: In member function 'double LAMMPS_NS::PairBOP::sigmaBo(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1758:42: warning: 'dis_jk[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1758:62: warning: 'dis_jk[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1759:35: warning: 'dis_jk[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         +dis_ik[2]*dis_jk[2])/(r_ik*r_jk);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1770:51: warning: 'r_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     dcA_ikj[2][1]=(-dis_ik[2]*r_ik*r_jk-cosAng_ikj
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1495:38: warning: 'temp_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
             bt_sg[nb_jk].temp=temp_jk;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:3636:30: warning: 'temp_ji' may be used uninitialized in this function [-Wmaybe-uninitialized]
               else if(temp_kk==temp_ji&&setting==0) {
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::direct(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, int, int, int, double, double, double, double, double, double, double, double, double&, double&, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:2799:20: warning: 'dcurlji' may be used uninitialized in this function [-Wmaybe-uninitialized]
    smf1n += dcurlji*iq*(afbn-fafbnl)*esucon/r;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:2802:20: warning: 'dcurlij' may be used uninitialized in this function [-Wmaybe-uninitialized]
    smf1j += dcurlij*jq*(afbj-fafbnl)*esucon/r;
                    ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp: In member function 'virtual void LAMMPS_NS::PairEAM::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp:469:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp:470:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp:472:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp: In member function 'void LAMMPS_NS::PairEAM::grab(FILE*, int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp:787:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloy::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:191:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:204:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp: In member function 'virtual void LAMMPS_NS::PairEAMCD::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp:386:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair += D_i * rhojp * t1;
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFS::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:193:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp: In member function 'int LAMMPS_NS::PairEIM::grabpair(FILE*, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp:969:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(line,MAXLINE,fptr);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp:973:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(line,MAXLINE,fptr);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:209:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw_zbl.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_nb3b_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_nb3b_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_nb3b_harmonic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp: In member function 'void LAMMPS_NS::PairLCBOP::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:981:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:987:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:988:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:989:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&gamma_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:990:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&A);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:991:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:992:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:993:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&alpha);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:994:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:995:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:996:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&d);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:997:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:998:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_4);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:999:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_6);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1000:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&L);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1001:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&kappa);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1002:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_0);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1003:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1004:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_0);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1005:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1_LR);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1006:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2_LR);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1007:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1008:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1009:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1010:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1011:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&lambda_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1012:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&lambda_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1013:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1014:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&delta);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1017:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1026:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(s,MAXLINE,fp);
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1033:40: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         while (1) { fgets(s,MAXLINE,fp); if (s[0] != '#') break; }
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1040:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1046:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_rebo.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_rebo.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_rebo.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_sw.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_sw.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:576:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:577:60: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     while (line == strchr(line,'#')) fgets(line,MAXLINE,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:593:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:611:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:647:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'void LAMMPS_NS::PairPolymorphic::grab(FILE*, int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:878:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff_mod.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:259:7: warning: 'emb' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (emb > epsilon) {
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:287:82: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally(i,i,nlocal,newton_pair,evdwl,0.0,0.0,delx,dely,delz);
                                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:287:82: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:287:82: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff_mod_c.cpp.o
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[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_create.cpp.o
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[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_atom_swap.cpp: In member function 'int LAMMPS_NS::FixAtomSwap::attempt_semi_grand()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_atom_swap.cpp:384:54: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
         atom->v[i][0] *= sqrt_mass_ratio[itype][jtype];
                                                      ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp: In member function 'virtual void LAMMPS_NS::FixBondSwap::post_integrate()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:628:44: warning: 'jlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jangle = 0; jangle < num_angle[jlast]; jangle++) {
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:606:44: warning: 'jprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jangle = 0; jangle < num_angle[jprev]; jangle++) {
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:201:25: warning: 'jnext' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:617:44: warning: 'ilast' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (iangle = 0; iangle < num_angle[ilast]; iangle++) {
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:490:39: warning: 'iprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (iprev >= 0) iprevtag = tag[iprev];
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:201:7: warning: 'inext' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:413:53: warning: 'jnextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(jnextangletype,i,jnext,jlast) +
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:418:49: warning: 'jangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(jangletype,jprev,j,jnext) -
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:417:53: warning: 'inextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(inextangletype,i,inext,ilast) -
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:412:56: warning: 'iangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             delta += angle_eng(iangletype,iprev,i,jnext) +
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:456:37: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jbond = 0; jbond < num_bond[j]; jbond++)
                                     ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_tfmc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_tfmc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_tfmc.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/fix_client_md.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/fix_client_md.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/fix_client_md.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:348:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:352:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:353:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:381:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:382:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&max_cell_size,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:383:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:384:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:385:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp: In member function 'void LAMMPS_NS::Message::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp:64:3: warning: 'clientserver' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (clientserver == 1) {
   ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp: In member function 'void LAMMPS_NS::Server::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp:43:3: warning: 'protocol' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (protocol == MD) {
   ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_md.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_md.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_md.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp: In member function 'double LAMMPS_NS::FixGCMC::energy_full()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp:2293:11: warning: 'imolecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (imolecule == molecule[j]) continue;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp: In member function 'void LAMMPS_NS::ServerMC::loop()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:116:28: warning: 'xold[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
           x[m][2] = xold[2];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:115:28: warning: 'xold[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
           x[m][1] = xold[1];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:114:28: warning: 'xold[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
           x[m][0] = xold[0];
                            ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:15:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom.h:301:57: warning: 'atomid' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else if (map_style == 2) return map_find_hash(global);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:42:10: note: 'atomid' was declared here
   tagint atomid;
          ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/compute_msd_nongauss.cpp.o
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[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_efield.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_efield.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_efield.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'int sizeofint(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:558:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   while (size >= num && num_of_bits < 32) {
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'int sizeofints(int, unsigned int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:599:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   while (bytes[num_of_bytes] >= num) {
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'void sendints(int*, int, int, unsigned int*, unsigned int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:653:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   if (num_of_bits >= num_of_bytes * 8) {
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:654:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (i = 0; i < num_of_bytes; i++) {
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:659:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (i = 0; i < num_of_bytes-1; i++) {
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'int receivebits(int*, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:694:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (lastbits < num_of_bits) {
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'int xdr3dfcoord(XDR*, float*, int*, float*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:396:54: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define LASTIDX (sizeof(magicints) / sizeof(int) - 1 )
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:934:23: note: in expansion of macro 'LASTIDX'
     while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:45:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:938:14: note: in expansion of macro 'MYMIN'
     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:45:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:1114:14: note: in expansion of macro 'MYMIN'
     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:1140:54: warning: 'bitsizeint[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[2] = receivebits(buf, bitsizeint[2]);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:1139:54: warning: 'bitsizeint[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[1] = receivebits(buf, bitsizeint[1]);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:1138:54: warning: 'bitsizeint[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[0] = receivebits(buf, bitsizeint[0]);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_deposit.cpp: In member function 'virtual void LAMMPS_NS::FixDeposit::pre_exchange()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_deposit.cpp:529:56: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else atom->avec->create_atom(ntype+onemols[imol]->type[m],coords[m]);
                                                        ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_gld.cpp.o
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[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_oneway.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp: In member function 'virtual void LAMMPS_NS::FixEvaporate::pre_exchange()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp:322:31: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         } else if (me == proc && i == iatom) {
                               ^
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[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:321:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:325:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:326:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:327:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:328:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:329:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:359:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:360:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:361:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:362:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:372:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:376:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:377:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:378:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:379:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:380:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:381:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:413:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:414:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:415:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:416:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:417:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:477:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
                                                                 ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:149:58: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                         r0n[itype][jtype]*rninv -
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:151:58: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                         r0m[itype][jtype]*rminv) -
                                                          ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/xdr_compat.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/xdr_compat.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/xdr_compat.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:416:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:420:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:421:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:422:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:423:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:424:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:457:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:458:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:459:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:460:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:461:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:462:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:463:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:549:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:549:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:552:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:547:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:559:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:182:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:187:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:192:50: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (mm[itype][jtype]*r0n[itype][jtype]*rninv -
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:193:50: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:184:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:184:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_delta.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_delta.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_delta.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp: In member function 'virtual void LAMMPS_NS::AngleCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp:248:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp:249:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp:250:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k_ub[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp:251:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r_ub[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp: In member function 'virtual void LAMMPS_NS::AngleCosine::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp:196:70: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (comm->me == 0) fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                                      ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp.o
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp: In member function 'virtual void LAMMPS_NS::AngleCosinePeriodic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp:249:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp:250:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b[1],sizeof(int),atom->nangletypes,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp:251:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineSquared::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp:218:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp:219:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp: In member function 'virtual void LAMMPS_NS::AngleHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp:218:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp:219:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp: In member function 'virtual void LAMMPS_NS::AngleTable::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp:312:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp:313:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_angle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_angle.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_bond.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_bond.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_bond.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_full.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_full.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_full.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_molecular.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_molecular.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_molecular.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_template.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_template.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_template.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp: In member function 'virtual void LAMMPS_NS::BondFENE::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp:218:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp:219:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp:220:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp:221:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp: In member function 'virtual void LAMMPS_NS::BondFENEExpand::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:227:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:228:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:229:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:230:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:231:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp: In member function 'virtual void LAMMPS_NS::BondGromos::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp:169:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp:170:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp:170:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp:171:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp: In member function 'virtual void LAMMPS_NS::BondMorse::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp:174:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&d0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp:175:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp:176:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp: In member function 'virtual void LAMMPS_NS::BondNonlinear::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp:169:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp:170:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp:171:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&lamda[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp: In member function 'virtual void LAMMPS_NS::BondQuartic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:278:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:279:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b1[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:280:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b2[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:281:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&rc[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:282:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&u0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp: In member function 'virtual void LAMMPS_NS::BondTable::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp:255:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp:256:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:426:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:427:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:428:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:429:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:430:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weightflag,sizeof(int),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmmfsw::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:469:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:470:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:471:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:472:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:473:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weightflag,sizeof(int),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp:330:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp:331:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sign[1],sizeof(int),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp:332:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/fix_cmap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/fix_cmap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/fix_cmap.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp: In member function 'virtual void LAMMPS_NS::DihedralHelix::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp:325:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp:326:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp:327:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralMultiHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:321:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:322:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:323:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:324:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a4[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:325:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a5[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp: In member function 'virtual void LAMMPS_NS::DihedralOPLS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp:333:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp:334:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp:335:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp:336:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:336:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:337:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sign[1],sizeof(int),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:338:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->nimpropertypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp:277:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp:278:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:206:15: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       pd = -pd;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:205:18: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
       p = 2.0 - p;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp: In member function 'virtual void LAMMPS_NS::ImproperUmbrella::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp:318:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kw[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp:319:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&w0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp:320:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp:298:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (donor_flag == 0) type2param[i][j][k] = nparams;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:377:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:381:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:382:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:383:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:384:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:438:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:439:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:440:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_inner,sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:441:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:442:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:443:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp:149:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp:119:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmm::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:500:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:166:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingLJ::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp:508:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else k = atom->map(klist[kk]+tagprev);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingMorse::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp:411:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else k = atom->map(klist[kk]+tagprev);
                                         ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp:371:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (donor_flag == 0) type2param[i][j][k] = nparams;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:198:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:131:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:131:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/atom_vec_peri.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/atom_vec_peri.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/atom_vec_peri.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:435:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:439:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:440:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:441:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:442:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:472:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:473:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:474:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:475:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:476:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:532:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       philj6 = -lj4[itype][jtype]*r6inv +
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:527:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:194:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl6 = -lj4[itype][jtype]*r6inv +
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:192:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl12 = r6inv*lj3[itype][jtype]*r6inv -
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:620:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:624:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:625:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:626:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:662:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:663:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:664:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:665:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:666:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:668:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:669:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:670:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:671:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:672:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:477:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:504:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:505:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:506:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:507:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:508:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:510:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:335:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:334:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:262:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:258:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_damage_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_damage_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_damage_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:377:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:376:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:304:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:300:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_plasticity_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_plasticity_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_plasticity_atom.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/fix_peri_neigh.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/fix_peri_neigh.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/fix_peri_neigh.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeDilatationAtom::compute_peratom()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp:104:11: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
   double *theta;
           ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriEPS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:567:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:571:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:572:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:573:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:574:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:575:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:576:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_yieldstress[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriLPS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:492:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:496:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:497:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:498:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:499:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:500:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp: In member function 'virtual void LAMMPS_NS::PairPeriPMB::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:421:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:425:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&kspring[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:426:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:427:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:428:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_dynamic.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp: In member function 'virtual void LAMMPS_NS::PairPeriVES::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:550:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:554:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:555:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:556:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:557:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:558:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:559:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_lambdai[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:560:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_taubi[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp: In member function 'virtual int LAMMPS_NS::FixQEq::pack_forward_comm(int, int*, double*, int, int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp:480:10: warning: 'm' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return m;
          ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_fire.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_fire.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_fire.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_point.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_point.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_point.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp: In member function 'void LAMMPS_NS::FixPOEMS::readfile(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp:985:26: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (me == 0) fclose(fp);
                          ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_shielded.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_shielded.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_shielded.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_slater.cpp.o
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[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/hyper.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/hyper.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/hyper.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp: In member function 'virtual void LAMMPS_NS::FixHyperGlobal::pre_reverse(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp:305:20: warning: 'r0max' may be used uninitialized in this function [-Wmaybe-uninitialized]
     fbiasr = fbias / r0max / rmax;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp:305:34: warning: 'rmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
     fbiasr = fbias / r0max / rmax;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp:226:18: warning: 'jmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,j,m,imax,jmax;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp:226:13: warning: 'imax' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,j,m,imax,jmax;
             ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/neb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/neb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/neb.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/prd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/prd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/prd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_local.cpp: In member function 'virtual void LAMMPS_NS::FixHyperLocal::pre_reverse(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_local.cpp:479:27: warning: 'ijhalf' may be used uninitialized in this function [-Wmaybe-uninitialized]
     maxhalf[iold] = ijhalf;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp: In member function 'virtual void LAMMPS_NS::FixNEB::min_post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp:615:45: warning: 'lenuntilIm' may be used uninitialized in this function [-Wmaybe-uninitialized]
       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp:615:45: warning: 'idealPos' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp:615:58: warning: 'meanDist' may be used uninitialized in this function [-Wmaybe-uninitialized]
       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
                                                          ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/tad.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/tad.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/tad.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/temper.cpp.o
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[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/verlet_split.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_ehex.cpp: In member function 'virtual void LAMMPS_NS::FixEHEX::init()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_ehex.cpp:198:48: warning: 'id_shake' may be used uninitialized in this function [-Wmaybe-uninitialized]
      fshake = ((FixShake*) modify->fix[id_shake]);
                                                ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nh.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nh_small.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nh_small.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In constructor 'LAMMPS_NS::FixRigid::FixRigid(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:579:51: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (langflag) random = new RanMars(lmp,seed + me);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:396:30: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][2] = zflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:395:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][1] = yflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:394:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][0] = xflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:358:34: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (domain->dimension == 2 && zflag == 1.0)
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:364:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fflag[m-1][1] = yflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:363:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fflag[m-1][0] = xflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:224:32: warning: 'molecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (custom_flag) delete [] molecule;
                                ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph_small.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_npt.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nve_small.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nve_small.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nve_small.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_xv()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1482:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1477:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1461:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1405:50: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1404:60: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1404:50: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                  ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt_small.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt_small.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt_small.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_shake.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_shake.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_shake.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_v()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1627:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1614:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1576:40: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x1 = x[i][1] + ybox*yprd + zbox*yz;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1575:50: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1575:40: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                        ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_append_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_append_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_append_atoms.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2223:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           radone = lbonus[line[i]].length;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::readfile(int, double*, double**, double**, double**, LAMMPS_NS::imageint*, int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2296:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_static()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2122:32: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (inpfile && inbody[ibody]) continue;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2103:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2020:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         orient[i][0] = lbonus[line[i]].theta - theta_body;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2085:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_msst.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_msst.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_msst.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_nphug.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_nphug.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_nphug.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidSmall::write_restart_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2659:26: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (me == 0) fclose(fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_xv()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1394:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1389:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1374:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_wall_piston.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_wall_piston.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_wall_piston.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_v()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1532:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1519:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In constructor 'LAMMPS_NS::FixRigidSmall::FixRigidSmall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:515:57: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (langflag) random = new RanMars(lmp,seed + comm->me);
                                                         ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/atom_vec_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/atom_vec_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/atom_vec_spin.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/compute_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/compute_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/compute_spin.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2380:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           radone = lbonus[line[i]].length;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::readfile(int, double**, int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2466:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
                                                                   ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/fix_langevin_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/fix_langevin_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/fix_langevin_spin.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/fix_neb_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/fix_neb_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/fix_neb_spin.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_static()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2264:32: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (inpfile && inbody[ibody]) continue;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2242:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2157:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         orient[i][0] = lbonus[line[i]].theta - theta_body;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2224:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/fix_nve_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/fix_nve_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/fix_nve_spin.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/fix_precession_spin.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/neb_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/neb_spin.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/min_spin.cpp: In member function 'void LAMMPS_NS::MinSpin::advance_spins(double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/min_spin.cpp:245:10: warning: unused variable 'msq' [-Wunused-variable]
   double msq,scale,fm2,energy,dts2;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/min_spin.cpp:245:14: warning: unused variable 'scale' [-Wunused-variable]
   double msq,scale,fm2,energy,dts2;
              ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleCut::compute_single_pair(int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:326:8: warning: unused variable 'ilist' [-Wunused-variable]
   int *ilist,*jlist,*numneigh,**firstneigh;  
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:503:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:507:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
    fread(&cut_spin_long[i][j],sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:532:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_long_global,sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:533:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleLong::compute_single_pair(int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:360:8: warning: variable 'ilist' set but not used [-Wunused-but-set-variable]
   int *ilist,*jlist,*numneigh,**firstneigh;  
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:572:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:576:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_long[i][j],sizeof(int),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:601:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_long_global,sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:602:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDmi::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:535:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:539:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&DM[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:540:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_dmx[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:541:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_dmy[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:542:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_dmz[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:543:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&vmech_dmx[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:544:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&vmech_dmy[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:545:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&vmech_dmz[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:546:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_dmi[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDmi::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:580:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_dmi_global,sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:581:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:582:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp: In member function 'virtual void LAMMPS_NS::PairSpinExchange::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:500:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:504:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&J1_mag[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:505:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&J1_mech[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:506:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&J2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:507:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&J2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:508:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_exchange[i][j],sizeof(double),1,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp: In member function 'virtual void LAMMPS_NS::PairSpinExchange::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:539:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_exchange_global,sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:540:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:541:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_sna_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_sna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_sna_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp: In member function 'virtual void LAMMPS_NS::PairSpinMagelec::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:519:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:523:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&ME[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:524:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_mex[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:525:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_mey[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:526:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_mez[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:527:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_magelec[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp: In member function 'virtual void LAMMPS_NS::PairSpinMagelec::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:557:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_magelec_global,sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:558:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:559:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp: In member function 'virtual void LAMMPS_NS::PairSpinNeel::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:690:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:694:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&g1[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:695:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&g1_mech[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:696:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&g2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:697:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&g2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:698:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&q1[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:699:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&q1_mech[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:700:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&q2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:701:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&q2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:702:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_neel[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp: In member function 'virtual void LAMMPS_NS::PairSpinNeel::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:736:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_neel_global,sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:737:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:738:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snad_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snad_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snad_atom.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snav_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snav_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snav_atom.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp: In member function 'void LAMMPS_NS::PairSNAP::compute_bispectrum()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp:276:15: warning: unused variable 'numneigh' [-Wunused-variable]
   int *jlist,*numneigh,**firstneigh;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp:276:26: warning: unused variable 'firstneigh' [-Wunused-variable]
   int *jlist,*numneigh,**firstneigh;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp: In member function 'void LAMMPS_NS::SNA::compute_zi()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:351:7: warning: unused variable 'ma2' [-Wunused-variable]
   int ma2, mb2;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:351:12: warning: unused variable 'mb2' [-Wunused-variable]
   int ma2, mb2;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp: In member function 'void LAMMPS_NS::SNA::compute_yi(const double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:436:9: warning: unused variable 'mb' [-Wunused-variable]
     int mb = (2 * (mb1min+mb2max) - j1 - j2 + j) / 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:437:9: warning: unused variable 'ma' [-Wunused-variable]
     int ma = (2 * (ma1min+ma2max) - j1 - j2 + j) / 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:408:7: warning: unused variable 'j' [-Wunused-variable]
   int j;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:409:7: warning: unused variable 'jjz' [-Wunused-variable]
   int jjz;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:423:7: warning: unused variable 'ma2' [-Wunused-variable]
   int ma2, mb2;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:423:12: warning: unused variable 'mb2' [-Wunused-variable]
   int ma2, mb2;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp: In member function 'void LAMMPS_NS::SNA::compute_deidrj(double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:550:11: warning: unused variable 'ma' [-Wunused-variable]
       int ma = mb;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp: In member function 'void LAMMPS_NS::SNA::compute_dbidrj()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:709:11: warning: unused variable 'ma' [-Wunused-variable]
       int ma = mb;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:759:11: warning: unused variable 'ma' [-Wunused-variable]
       int ma = mb;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:809:11: warning: unused variable 'ma' [-Wunused-variable]
       int ma = mb;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:659:12: warning: unused variable 'jjjzarray_r' [-Wunused-variable]
   double** jjjzarray_r;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:660:12: warning: unused variable 'jjjzarray_i' [-Wunused-variable]
   double** jjjzarray_i;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:661:10: warning: unused variable 'jjjmambzarray_r' [-Wunused-variable]
   double jjjmambzarray_r;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:662:10: warning: unused variable 'jjjmambzarray_i' [-Wunused-variable]
   double jjjmambzarray_i;
          ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/fix_store_kim.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/fix_store_kim.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/fix_store_kim.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp: In constructor 'LAMMPS_NS::FixWallSRD::FixWallSRD(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp:65:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp: In member function 'void LAMMPS_NS::KimInit::do_init(char*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp:294:7: warning: variable 'kimerror' set but not used [-Wunused-but-set-variable]
   int kimerror;
       ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp: In member function 'void LAMMPS_NS::KimQuery::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:92:9: warning: variable 'varname' set but not used [-Wunused-but-set-variable]
   char *varname, *function, *value;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:92:19: warning: variable 'function' set but not used [-Wunused-but-set-variable]
   char *varname, *function, *value;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:92:30: warning: unused variable 'value' [-Wunused-variable]
   char *varname, *function, *value;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:98:10: warning: variable 'model_name' set but not used [-Wunused-but-set-variable]
   char * model_name;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:108:8: warning: variable 'split' set but not used [-Wunused-but-set-variable]
   bool split = false;
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_static()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2965:25: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       c1 = tbonus[tri[i]].c1;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2953:30: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       length = lbonus[line[i]].length;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2937:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = ebonus[ellipsoid[i]].shape;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp: In member function 'void LAMMPS_NS::KimInteractions::do_setup(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp:147:5: warning: 'fixed_types' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (!fixed_types) {
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_dynamic()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:3048:30: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       inertia = tbonus[tri[i]].inertia;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:3035:40: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       biglist[k].theta = lbonus[line[i]].theta;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:3023:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = ebonus[ellipsoid[i]].shape;
                                  ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/pair_kim.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/pair_kim.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/pair_kim.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::reset_velocities()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1016:33: warning: 'dof_tstat' may be used uninitialized in this function [-Wmaybe-uninitialized]
       tbin = vbin[i].value[0]/(n-dof_tstat) * tfactor;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp: In function 'double {anonymous}::get_temperature_conversion_factor({anonymous}::units, {anonymous}::units)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp:1019:10: warning: unused variable 'to_si' [-Wunused-variable]
   double to_si;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::parameterize()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2682:37: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double *c1 = tbonus[tri[i]].c1;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2702:41: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double length = lbonus[line[i]].length;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2699:46: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double *shape = ebonus[ellipsoid[i]].shape;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp:88:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp:105:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
              ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::init()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:139:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_init, NULL);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:157:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_initial_integrate, arglist);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:175:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_final_integrate, NULL);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate_respa(int, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:193:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_initial_integrate_respa, arglist);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate_respa(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:212:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_final_integrate_respa, arglist);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::reset_dt()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:230:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_reset_dt, NULL);
              ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/pair_python.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/pair_python.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/pair_python.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::collisions_multi()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1547:33: warning: 'xbcollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[2] = xbcollfirst[2];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1546:33: warning: 'xbcollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[1] = xbcollfirst[1];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1545:33: warning: 'xbcollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[0] = xbcollfirst[0];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1544:33: warning: 'xscollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[2] = xscollfirst[2];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1543:33: warning: 'xscollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[1] = xscollfirst[1];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1542:33: warning: 'xscollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[0] = xscollfirst[0];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1550:29: warning: 'normfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[2] = normfirst[2];
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1549:29: warning: 'normfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[1] = normfirst[1];
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1548:29: warning: 'normfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[0] = normfirst[0];
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1575:32: warning: 'typefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (collidestyle == SLIP && type == SPHERE)
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1580:33: warning: 'jfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
         force_wall(v[i],vsnew,j);
                                 ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp: In member function 'int LAMMPS_NS::PythonImpl::create_entry(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp:412:47: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   else if (format && strlen(format) != ninput+noutput)
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp: In member function 'virtual void LAMMPS_NS::PythonImpl::invoke_function(int, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp:322:36: warning: 'pValue' may be used uninitialized in this function [-Wmaybe-uninitialized]
     PyTuple_SetItem(pArgs,i,pValue);
                                    ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC/fix_atc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC/fix_atc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC/fix_atc.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp: In member function 'void LAMMPS_NS::ComputeVoronoi::processCell(voro::voronoicell_neighbor&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp:514:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for (j=0; j<narea.size(); ++j)
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp:529:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       if (neighs != narea.size())
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp:546:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         for( j=0; j<vlist.size(); j+=vlist[j]+1 ) {
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp:590:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       if (neighs != narea.size())
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'double LAMMPS_NS::ComputePressureBocs::get_cg_p_corr(double**, int, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp:250:10: warning: 'correction' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return correction;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'virtual double LAMMPS_NS::ComputePressureBocs::compute_scalar()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp:347:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       scalar = (temperature->dof * boltz * t +
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'virtual void LAMMPS_NS::ComputePressureBocs::compute_vector()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp:394:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
                               ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/fix_bocs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/fix_bocs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/fix_bocs.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna2_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna2_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna2_fene.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp: In member function 'virtual void LAMMPS_NS::BondOxdnaFene::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp:382:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp:383:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&Delta[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp:384:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/fix_nve_dot.cpp.o
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[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/fix_nve_dotc_langevin.cpp.o
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[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:685:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_excv.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_excv.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_excv.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:367:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:832:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:837:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&k_cxst[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:838:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_0[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:839:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_c[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:840:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_lo[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:841:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_hi[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:842:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_lc[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:843:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_hc[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:844:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst_lo[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:845:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst_hi[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:847:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:848:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst1_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:849:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst1_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:850:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:851:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst1_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:853:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:854:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst4_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:855:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst4_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:856:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:857:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst4_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:859:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst5[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:860:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst5_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:861:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst5_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:862:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst5[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:863:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst5_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:865:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst6[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:866:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst6_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:867:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst6_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:868:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst6[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:869:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst6_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:871:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&AA_cxst1[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:872:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&BB_cxst1[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:936:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:937:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:938:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:453:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:458:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&kappa_dh[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:459:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&qeff_dh_pf[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:460:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_dh[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:461:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_dh_ast[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:462:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_dh_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:495:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:496:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:497:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:831:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:991:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:996:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&k_cxst[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:997:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_0[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:998:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_c[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:999:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_lo[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1000:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_hi[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1001:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_lc[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1002:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_hc[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1003:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst_lo[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1004:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst_hi[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1006:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1007:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst1_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1008:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst1_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1009:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1010:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst1_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1012:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1013:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst4_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1014:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst4_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1015:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1016:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst4_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1018:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst5[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1019:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst5_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1020:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst5_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1021:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst5[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1022:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst5_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1024:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst6[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1025:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst6_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1026:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst6_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1027:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst6[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1028:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst6_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1030:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst3p[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1031:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_cxst3p_ast[i][j],sizeof(double),1,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1032:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst3p[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1033:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_cxst3p_c[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1034:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst4p[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1035:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_cxst4p_ast[i][j],sizeof(double),1,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1036:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst4p[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1037:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_cxst4p_c[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1107:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1108:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1109:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:571:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:713:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:718:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_ss[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:719:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_ss[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:720:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_ss_ast[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:721:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_ss[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:722:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_ss_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:723:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_sb[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:724:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_sb[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:725:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_sb_ast[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:726:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_sb[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:727:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_sb_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:728:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_bb[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:729:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_bb[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:730:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_bb_ast[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:731:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_bb[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:732:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_bb_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:775:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:776:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:777:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:797:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:976:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:981:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_hb[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:982:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:983:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_0[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:984:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:985:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_lo[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:986:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_hi[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:987:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_lc[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:988:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_hc[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:989:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb_lo[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:990:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb_hi[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:991:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shift_hb[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:993:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb1[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:994:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb1_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:995:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb1_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:996:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb1[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:997:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb1_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:999:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb2[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1000:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb2_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1001:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb2_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1002:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb2[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1003:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb2_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1005:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb3[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1006:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb3_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1007:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb3_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1008:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb3[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1009:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb3_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1011:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb4[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1012:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb4_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1013:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb4_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1014:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb4[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1015:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb4_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1017:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb7[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1018:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb7_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1019:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb7_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1020:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb7[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1021:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb7_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1023:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb8[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1024:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb8_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1025:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb8_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1026:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb8[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1027:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb8_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1102:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1103:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1104:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:920:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1082:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1087:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_st[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1088:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1089:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_0[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1090:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1091:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_lo[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1092:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_hi[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1093:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_lc[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1094:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_hc[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1095:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st_lo[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1096:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st_hi[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1097:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shift_st[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1099:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st4[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1100:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_st4_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1101:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st4_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1102:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st4[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1103:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st4_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1105:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st5[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1106:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_st5_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1107:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st5_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1108:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st5[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1109:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st5_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1111:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st6[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1112:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_st6_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1113:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st6_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1114:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st6[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1115:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st6_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1117:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st1[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1118:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_st1_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1119:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st1[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1120:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_st1_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1121:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st2[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1122:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_st2_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1123:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st2[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1124:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_st2_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1190:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1191:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1192:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:785:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:950:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:955:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&k_xst[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:956:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_0[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:957:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_c[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:958:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_lo[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:959:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_hi[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:960:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_lc[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:961:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_hc[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:962:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst_lo[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:963:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst_hi[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:965:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst1[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:966:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst1_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:967:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst1_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:968:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst1[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:969:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst1_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:971:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst2[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:972:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst2_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:973:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst2_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:974:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst2[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:975:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst2_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:977:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst3[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:978:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst3_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:979:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst3_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:980:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst3[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:981:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst3_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:983:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst4[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:984:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst4_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:985:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst4_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:986:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst4[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:987:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst4_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:989:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst7[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:990:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst7_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:991:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst7_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:992:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst7[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:993:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst7_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:995:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst8[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:996:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst8_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:997:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst8_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:998:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst8[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:999:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst8_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1072:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1073:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1074:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_edpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_edpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_edpd.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_mdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_mdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_mdpd.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_tdpd.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd_rhosum.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd_rhosum.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd_rhosum.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:455:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:459:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:460:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:461:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&power[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:462:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:463:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&kappa[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:464:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&powerT[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:465:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cutT[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:468:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&sc[i][j][k],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:472:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&kc[i][j][k],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:510:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:511:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:512:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp: In member function 'virtual void LAMMPS_NS::PairMDPD::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:350:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:354:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&A_att[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:355:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&B_rep[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:356:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:357:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:358:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_r[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp: In member function 'virtual void LAMMPS_NS::PairMDPD::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:388:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&temperature,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:389:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:390:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:391:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:221:34: warning: 'dQr' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Q[j]    -= ( dQc - dQd + dQr );
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:221:28: warning: 'dQd' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Q[j]    -= ( dQc - dQd + dQr );
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:221:28: warning: 'dQc' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp: In member function 'virtual void LAMMPS_NS::PairTDPD::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:397:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:401:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:402:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:403:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&power[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:404:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:405:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cutcc[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:407:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&kappa[i][j][k],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:408:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&epsilon[i][j][k],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:409:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&powercc[i][j][k],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp: In member function 'virtual void LAMMPS_NS::PairTDPD::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:445:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&temperature,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:446:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:447:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:448:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp: In member function 'virtual void LAMMPS_NS::AngleSDK::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp:335:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp:336:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp:337:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&repscale[1],sizeof(double),atom->nangletypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDK::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:376:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:380:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lj_type[i][j],sizeof(int),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:381:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:382:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:383:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDK::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:413:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:414:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:415:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:416:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDKCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:468:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:472:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lj_type[i][j],sizeof(int),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:473:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:474:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:475:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDKCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:507:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:508:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:509:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:510:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:511:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:512:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:513:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/colvarproxy_lammps.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/colvarproxy_lammps.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/colvarproxy_lammps.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp: In function 'void write_group(FILE*, int, LAMMPS_NS::Atom*, LAMMPS_NS::Group*, int, int, int, FILE*, FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp:131:25: warning: 'recvlist' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (num > 0) delete[] recvlist;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp: In member function 'void LAMMPS_NS::Group2Ndx::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp:165:80: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
       write_group(fp,gid,atom,group,comm->me,comm->nprocs,world,screen,logfile);
                                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp: In member function 'virtual void LAMMPS_NS::FixColvars::setup(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp:558:33: warning: unused variable 'id' [-Wunused-variable]
     std::vector<int>           &id = *(proxy->modify_atom_ids());
                                 ^
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_saed.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_saed.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_saed.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp: In member function 'void LAMMPS_NS::Ndx2Group::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp:127:37: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
         name = find_section(fp,NULL);
                                     ^
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_xrd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_xrd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_xrd.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/atom_vec_dpd.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_cv.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_cv.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_cv.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp: In member function 'void LAMMPS_NS::FixEOStable::read_table(LAMMPS_NS::FixEOStable::Table*, LAMMPS_NS::FixEOStable::Table*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:217:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:219:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:220:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:226:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:236:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:238:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_shardlow.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_shardlow.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_shardlow.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp: In member function 'void LAMMPS_NS::FixEOStableRX::read_table(LAMMPS_NS::FixEOStableRX::Table*, LAMMPS_NS::FixEOStableRX::Table*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:436:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:438:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:439:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:445:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:473:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:475:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nbin_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nbin_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nbin_ssa.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix.h:17:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:14:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp: In member function 'virtual void LAMMPS_NS::FixRX::post_constructor()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pointers.h:37:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define MAX(A,B) ((A) > (B) ? (A) : (B))
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:324:24: note: in expansion of macro 'MAX'
         tmpmaxstrlen = MAX(tmpmaxstrlen,strlen(word));
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp: In member function 'void LAMMPS_NS::FixRX::initSparse()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:549:59: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             if (sparseKinetics_inu[i][idx] >= nu_bin.size())
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:567:59: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             if (sparseKinetics_inu[i][idx] >= nu_bin.size())
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:583:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i = 1; i < nu_bin.size(); ++i)
                                     ^
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nstencil_half_bin_2d_newton_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nstencil_half_bin_2d_newton_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nstencil_half_bin_2d_newton_ssa.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonSSA::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:207:54: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                        tag[j]-tagprev);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:205:68: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                   which = find_special(onemols[imol]->special[iatom],
                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:205:52: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                   which = find_special(onemols[imol]->special[iatom],
                                                    ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp.o
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[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:316:7: warning: unused variable 'irequest' [-Wunused-variable]
   int irequest = neighbor->request(this,instance_me);
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:378:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:382:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:383:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:384:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:413:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&temperature,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:414:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:415:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:416:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:409:7: warning: unused variable 'irequest' [-Wunused-variable]
   int irequest = neighbor->request(this,instance_me);
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:479:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:483:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:484:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:485:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&kappa[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:486:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:516:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:517:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:518:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'virtual void LAMMPS_NS::PairExp6rx::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:971:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:975:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'virtual void LAMMPS_NS::PairExp6rx::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1001:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1002:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1003:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1004:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'void LAMMPS_NS::PairMultiLucy::read_table(LAMMPS_NS::PairMultiLucy::Table*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:365:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:367:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:368:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:374:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:387:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:389:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucy::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:708:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:709:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'void LAMMPS_NS::PairMultiLucyRX::read_table(LAMMPS_NS::PairMultiLucyRX::Table*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:510:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:512:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:513:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:519:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:532:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:534:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucyRX::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:853:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:854:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'void LAMMPS_NS::PairExp6rx::getMixingWeights(int, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&) const':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1221:32: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1235:35: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1214:32: warning: 'nMolecules1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1228:35: warning: 'nMoleculesOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1221:5: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1235:5: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1214:5: warning: 'fraction1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1228:5: warning: 'fractionOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp: In member function 'void LAMMPS_NS::PairTableRX::getMixingWeights(int, double&, double&, double&, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:577:29: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2 = nMolecules2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:576:35: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2old = nMoleculesOld2;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:572:27: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2 = fraction2;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:571:33: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2old = fractionOld2;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:575:29: warning: 'nMolecules1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1 = nMolecules1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:574:35: warning: 'nMoleculesOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1old = nMoleculesOld1;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:570:27: warning: 'fraction1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1 = fraction1;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:569:33: warning: 'fractionOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1old = fractionOld1;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucy::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:177:24: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
         f[i][2] += delz*fpair;
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:189:52: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (rho[i]*rho[i] < tb->innersq || rho[j]*rho[j] < tb->innersq)
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'void LAMMPS_NS::PairMultiLucyRX::getMixingWeights(int, double&, double&, double&, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1015:29: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2 = nMolecules2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1014:35: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2old = nMoleculesOld2;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1010:27: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2 = fraction2;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1009:33: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2old = fractionOld2;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1013:29: warning: 'nMolecules1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1 = nMolecules1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1012:35: warning: 'nMoleculesOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1old = nMoleculesOld1;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1008:27: warning: 'fraction1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1 = fraction1;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1007:33: warning: 'fractionOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1old = fractionOld1;
                                 ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/compute_temp_drude.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/compute_temp_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/compute_temp_drude.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp.o
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[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_langevin_drude.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp: In member function 'int LAMMPS_NS::FixDrudeTransform<inverse>::pack_forward_comm(int, int*, double*, int, int*) [with bool inverse = false]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp:294:13: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
             buf[m++] = x[j][2] + dz;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp: In member function 'int LAMMPS_NS::FixDrudeTransform<inverse>::pack_forward_comm(int, int*, double*, int, int*) [with bool inverse = true]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp:294:13: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:360:7: warning: unused variable 'irequest' [-Wunused-variable]
   int irequest = neighbor->request(this,instance_me);
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:491:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:495:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:496:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:497:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&polar[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:498:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&thole[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:500:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:536:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:537:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:538:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&thole_global,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:539:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:540:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:541:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:542:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:543:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:544:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/atom_vec_electron.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/atom_vec_electron.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/atom_vec_electron.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutTholeLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:668:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:661:78: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (drudetype[type[i]] != NOPOL_TYPE && drudetype[type[j]] != NOPOL_TYPE &&
                                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:663:27: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul += factor_e * dcoul;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:663:27: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:657:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:657:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:660:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:655:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:226:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:227:33: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:190:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:227:33: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:219:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:224:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:221:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:232:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:222:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = qi*qj * table;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:221:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_atom_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_atom_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_atom_eff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp: In member function 'virtual void LAMMPS_NS::PairThole::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:314:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:318:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&polar[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:319:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&thole[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:320:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp: In member function 'virtual void LAMMPS_NS::PairThole::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:350:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&thole_global,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:351:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:352:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:353:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_eff.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_temp_deform_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_temp_deform_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_temp_deform_eff.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_temp_eff.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/compute_fep.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/compute_fep.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/fix_adapt_fep.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/fix_adapt_fep.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/fix_adapt_fep.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp: In member function 'virtual void LAMMPS_NS::PairEffCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:968:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:971:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&cut[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp: In member function 'virtual void LAMMPS_NS::PairEffCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:995:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:996:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:997:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCutSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:275:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:279:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:280:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCutSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:309:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:310:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:312:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:313:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:314:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:362:80: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:297:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:301:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:328:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:329:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:331:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:332:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:333:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:372:82: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     prefactor = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:373:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:839:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:843:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:844:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:845:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:846:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:847:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:882:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:883:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:884:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:886:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:887:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:888:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:889:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:890:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:383:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:387:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:388:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:389:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:390:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:391:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:426:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:427:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:428:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:430:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:431:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:432:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:433:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:434:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:499:37: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:494:78: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e *lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:980:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (1.0/(denlj*denlj) - 1.0/denlj);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:972:81: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:973:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:142:80: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                                ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:526:71: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:547:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:548:66: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:547:58: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:547:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:186:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (1.0/(denlj*denlj) - 1.0/denlj);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:179:70: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:180:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:399:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:403:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:404:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:405:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:406:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:440:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:441:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:442:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:444:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:445:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:446:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:447:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:448:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:522:37: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:516:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:515:81: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:158:70: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:159:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2Soft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:322:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:326:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:327:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:328:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:329:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2Soft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:361:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:362:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:363:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:364:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:365:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:366:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:379:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:383:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:384:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:385:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:386:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:387:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:422:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:423:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:424:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:426:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:427:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:428:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:429:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:430:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:496:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:491:79: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:147:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:143:80: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                                ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:795:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:799:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:800:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:801:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:802:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:836:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:837:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:838:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:840:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:841:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:842:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:843:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:844:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:926:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:918:81: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:919:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:656:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:660:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:661:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:662:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:663:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:696:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:697:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:699:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:700:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:701:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:702:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:754:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                               ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:519:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:520:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:521:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:522:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:523:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:525:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:526:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:527:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:528:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:529:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:491:71: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:507:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:508:66: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:507:58: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:507:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:174:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:167:70: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:168:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:391:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:390:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:318:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:314:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:411:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:315:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:319:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:320:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:321:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:322:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:323:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD/dump_h5md.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD/dump_h5md.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD/dump_h5md.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_manifoldforce.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_manifoldforce.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_manifoldforce.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:456:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:457:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:458:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:459:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:460:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:359:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:358:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:286:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:282:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_cylinder.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_cylinder.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_cylinder.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_cylinder_dent.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_force.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_force.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_thylakoid.cpp: In member function 'virtual void LAMMPS_NS::user_manifold::manifold_thylakoid::checkup()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_thylakoid.cpp:62:65: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'std::vector<LAMMPS_NS::user_manifold::thyla_part*>::size_type {aka unsigned int}' [-Wformat=]
     fprintf(screen,"I have %ld parts. They are:\n", parts.size());
                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_thylakoid.cpp:63:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for( int i = 0; i < parts.size(); ++i ){
                                    ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_funcs.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/pair_meamc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/pair_meamc.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_linalg.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_linalg.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_linalg.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_setup_done.cpp: In member function 'double LAMMPS_NS::MEAM::phi_meam(double, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_setup_done.cpp:450:21: warning: 'rho0_2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rhobar2 = rho02 / rho_bkgd2 * G2;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_setup_done.cpp:449:21: warning: 'rho0_1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rhobar1 = rho01 / rho_bkgd1 * G1;
                     ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp: In member function 'void potdata::readpot(const char*, const char*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:394:13: warning: variable 'dp' set but not used [-Wunused-but-set-variable]
    double f,dp;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:375:18: warning: variable 'alm' set but not used [-Wunused-but-set-variable]
  double alp = al,alm = al;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:158:19: warning: variable 'dr' set but not used [-Wunused-but-set-variable]
   double x0,x1,dx,dr;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:187:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:203:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:246:34: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,sizeof(line),in);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:306:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:329:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:331:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:334:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:343:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:345:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:358:34: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,sizeof(line),in);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp: In function 'void getparmindata(const char*, int*, double*, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:109:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:119:34: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,sizeof(line),in);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:123:34: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,sizeof(line),in);
                                  ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_splinetab.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_splinetab.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_splinetab.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/pair_meamc.cpp: In member function 'void LAMMPS_NS::PairMEAMC::read_files(char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/pair_meamc.cpp:590:69: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
     meam_inst->meam_setup_param(which,value,nindex,index,&errorflag);
                                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineShift::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp:227:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
        fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp:228:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
        fread(&kcost[1],sizeof(double),atom->nangletypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp:229:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
        fread(&ksint[1],sizeof(double),atom->nangletypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp:230:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
        fread(&theta[1],sizeof(double),atom->nangletypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::compute_x(const int*, const int* const*, double*, double*, double*, double*, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:593:24: warning: unused variable 'mx' [-Wunused-variable]
   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:593:27: warning: unused variable 'itag' [-Wunused-variable]
   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:593:32: warning: unused variable 'jtag' [-Wunused-variable]
   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:598:10: warning: unused variable 'nbc' [-Wunused-variable]
   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:598:20: warning: unused variable 'tbl' [-Wunused-variable]
   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:598:30: warning: unused variable 'tbm' [-Wunused-variable]
   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:599:13: warning: unused variable 'lmax_local' [-Wunused-variable]
   const int lmax_local = lmax;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:608:10: warning: variable 't0' set but not used [-Wunused-but-set-variable]
   double t0,t1;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:608:13: warning: variable 't1' set but not used [-Wunused-but-set-variable]
   double t0,t1;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:617:18: warning: unused variable 'tsort' [-Wunused-variable]
   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:617:42: warning: unused variable 'tlookup' [-Wunused-variable]
   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:619:10: warning: unused variable 'ntsort' [-Wunused-variable]
   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:619:36: warning: unused variable 'ntlookup' [-Wunused-variable]
   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'virtual void LAMMPS_NS::PairMGPT::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:1837:9: warning: variable 'volpres_tag' set but not used [-Wunused-but-set-variable]
     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:1837:25: warning: variable 'precision_tag' set but not used [-Wunused-but-set-variable]
     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_5_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 64u))[1]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 64u))[1]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 64u))[1]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 64u))[1]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(1,1);
   ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 128u))[2]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 128u))[2]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 128u))[2]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 128u))[2]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 192u))[3]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 192u))[3]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 192u))[3]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 192u))[3]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 256u))[4]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 256u))[4]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 256u))[4]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 256u))[4]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 320u))[5]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 320u))[5]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 320u))[5]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 320u))[5]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_7_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 64u))[1]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 64u))[1]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 64u))[1]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 64u))[1]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 128u))[2]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 128u))[2]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 128u))[2]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 128u))[2]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 192u))[3]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 192u))[3]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 192u))[3]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 192u))[3]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 256u))[4]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 256u))[4]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 256u))[4]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 256u))[4]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 320u))[5]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 320u))[5]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 320u))[5]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 320u))[5]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 384u))[6]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(6,6);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 384u))[6]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(6,6);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 384u))[6]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(6,6);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 384u))[6]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(6,6);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 448u))[7]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(7,7);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 448u))[7]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(7,7);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 448u))[7]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(7,7);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 448u))[7]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(7,7);
   ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineShiftExp::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:259:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&umin[1],sizeof(double),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:260:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&a[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:261:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&cost[1],sizeof(double),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:262:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&sint[1],sizeof(double),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:263:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp: In member function 'virtual void LAMMPS_NS::AngleDipole::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp:208:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp:209:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gamma0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp.o
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp: In member function 'virtual void LAMMPS_NS::AngleFourier::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp:234:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp:235:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C0[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp:236:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C1[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp:237:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp: In member function 'virtual void LAMMPS_NS::AngleFourierSimple::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp:240:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp:241:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp:242:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&N[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp: In member function 'virtual void LAMMPS_NS::AngleQuartic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp:235:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp:236:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp:237:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp:238:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonicShift::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp:179:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp:180:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp:181:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r1[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_ackland_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_ackland_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_ackland_atom.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_basal_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_basal_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_basal_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonicShiftCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:181:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:182:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:183:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r1[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_cnp_atom.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_gyration_shape.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_pressure_cylinder.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_pressure_cylinder.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_pressure_grem.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_stress_mop.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_pressure_grem.cpp: In member function 'virtual double LAMMPS_NS::ComputePressureGrem::compute_scalar()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_pressure_grem.cpp:93:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       scalar = (temperature->dof * boltz * t +
                                          ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_stress_mop_profile.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_stress_mop_profile.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_stress_mop_profile.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_temp_rotate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_temp_rotate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_temp_rotate.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp: In member function 'virtual void LAMMPS_NS::DihedralCosineShiftExp::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:324:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&umin[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:325:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:326:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cost[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:327:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sint[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:328:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta[1],sizeof(double),atom->ndihedraltypes,fp);
                                                            ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp: In member function 'virtual void LAMMPS_NS::DihedralFourier::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp:367:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp:382:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(k[i],sizeof(double),nterms[i],fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp:383:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(multiplicity[i],sizeof(int),nterms[i],fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp:384:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(shift[i],sizeof(double),nterms[i],fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralNHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp:321:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp:331:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(a[i],sizeof(double),nterms[i],fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp: In member function 'virtual void LAMMPS_NS::DihedralQuadratic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp:328:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp:329:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi0[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp: In member function 'virtual void LAMMPS_NS::DihedralSpherical::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:758:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:778:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(Ccoeff[i],sizeof(double),nterms[i],fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:779:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(phi_mult[i],sizeof(double),nterms[i],fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:780:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(phi_shift[i],sizeof(double),nterms[i],fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:781:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(phi_offset[i],sizeof(double),nterms[i],fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:782:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta1_mult[i],sizeof(double),nterms[i],fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:783:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta1_shift[i],sizeof(double),nterms[i],fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:784:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta1_offset[i],sizeof(double),nterms[i],fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:785:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta2_mult[i],sizeof(double),nterms[i],fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:786:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta2_shift[i],sizeof(double),nterms[i],fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:787:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta2_offset[i],sizeof(double),nterms[i],fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp: In member function 'virtual void LAMMPS_NS::DihedralTable::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp:1045:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp:1046:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp: In member function 'virtual void LAMMPS_NS::DihedralTableCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp:1032:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp:1033:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_addtorque.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_addtorque.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_addtorque.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: At global scope:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:575:13: warning: 'void tr_count(const double*, const double*, double*, const double*, double*, const double*, double*)' defined but not used [-Wunused-function]
 static void tr_count(const double * restrict A,
             ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelateLong::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp:507:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::read(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:2769:22: warning: variable 'edgeflag' set but not used [-Wunused-but-set-variable]
   int equivflag = 0, edgeflag = 0, bondflag = 0, customedgesflag = 0;
                      ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_electron_stopping.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_flow_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_flow_gauss.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_gle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_gle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_gle.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::dedup_mega_gloves(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:1842:27: warning: 'dedup_size' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (int i = dedup_size-1; i > 0; --i) { //dedup_size
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::limit_bond(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:2003:79: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (stabilization_flag == 1) i_statted_tags[atom->map(temp_limit_glove[i])] = 0;
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:1980:15: warning: 'temp_limit_glove' may be used uninitialized in this function [-Wmaybe-uninitialized]
     delete [] temp_limit_glove;
               ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_grem.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_grem.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_grem.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::unlimit_bond()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:2038:57: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (stabilization_flag == 1) i_statted_tags[i] = 1;
                                                         ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_imd.cpp.o
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[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ipi.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ti_spring.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ti_spring.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_ees.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_ees.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_ees.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp: In constructor 'LAMMPS_NS::FixTTMMod::FixTTMMod(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:120:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:121:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:125:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:126:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:130:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:131:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:135:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:136:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:145:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:146:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:150:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:151:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:155:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:156:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:160:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:161:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:165:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:166:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:170:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:171:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:175:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:176:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:180:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:181:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:185:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:186:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:190:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:191:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:195:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:196:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:200:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:201:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:205:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:206:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:210:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:211:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:215:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:216:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:220:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:221:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:225:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:226:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_region_ees.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_region_ees.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_region_ees.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp: In member function 'virtual void LAMMPS_NS::ImproperCossq::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp:304:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp:305:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp: In member function 'virtual void LAMMPS_NS::ImproperDistance::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp:250:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp:251:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp: In member function 'virtual void LAMMPS_NS::ImproperFourier::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:328:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:329:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:330:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C1[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:331:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C2[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:332:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&all[1],sizeof(int),atom->nimpropertypes,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp: In member function 'virtual void LAMMPS_NS::ImproperRing::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp:328:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp:329:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp: In member function 'virtual void LAMMPS_NS::PairAGNI::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:220:78: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (evflag) ev_tally_xyz_full(i,0.0,0.0,fxtmp,fytmp,fztmp,delx,dely,delz);
                                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:220:78: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:220:78: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairBuckMDF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:305:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:309:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:310:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:311:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:312:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairBuckMDF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:341:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:342:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:343:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:344:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp: In member function 'void LAMMPS_NS::PairAGNI::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:460:70: warning: 'wantdata' may be used uninitialized in this function [-Wmaybe-uninitialized]
     } else if (params && (wantdata >=0) && (nwords == params[wantdata].numeta+3)) {
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:430:26: warning: 'curparam' may be used uninitialized in this function [-Wmaybe-uninitialized]
     } else if ((curparam >=0) && (nwords == 1) && (strcmp(words[0],"endVar") == 0)) {
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDiel::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:285:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rme[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:286:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigmae[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:287:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDiel::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:314:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:315:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:316:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp: In member function 'virtual void LAMMPS_NS::PairCoulShield::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:301:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigmae[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:302:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp: In member function 'virtual void LAMMPS_NS::PairCoulShield::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:328:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:329:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:330:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_drip.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_drip.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_drip.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip_multi.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip_multi.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip_multi.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp: In member function 'void LAMMPS_NS::PairE3B::presetParam(int, bool&, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp:617:17: warning: 'lconv' may be used uninitialized in this function [-Wmaybe-uninitialized]
   bondL *= lconv*BOND_DELTA;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp:611:14: warning: 'econv' may be used uninitialized in this function [-Wmaybe-uninitialized]
   e2 *= econv;
              ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_extep.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_extep.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_extep.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp: In member function 'virtual void LAMMPS_NS::PairGaussCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:303:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:307:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&hgauss[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:308:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rmh[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:309:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigmah[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:310:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp: In member function 'virtual void LAMMPS_NS::PairGaussCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:339:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:340:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:341:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp: In member function 'void LAMMPS_NS::PairKolmogorovCrespiFull::calc_FvdW(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:453:39: warning: unused variable 'k' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:453:41: warning: unused variable 'l' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:453:43: warning: unused variable 'kk' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:453:46: warning: unused variable 'll' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp: In member function 'void LAMMPS_NS::PairILPGrapheneHBN::calc_FvdW(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:451:39: warning: unused variable 'k' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:451:41: warning: unused variable 'l' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:451:43: warning: unused variable 'kk' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:451:46: warning: unused variable 'll' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp: In member function 'void LAMMPS_NS::PairKolmogorovCrespiFull::calc_FRep(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:552:45: warning: variable 'r8inv' set but not used [-Wunused-but-set-variable]
   double rsq,r,rhosq1,exp0,exp1,r2inv,r6inv,r8inv,Tap,dTap,Vkc;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:555:21: warning: unused variable 'KC_neighs_j' [-Wunused-variable]
   int *KC_neighs_i,*KC_neighs_j;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp: In member function 'void LAMMPS_NS::PairILPGrapheneHBN::calc_FRep(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:552:38: warning: unused variable 'r2inv' [-Wunused-variable]
   double rsq,r,Rcut,rhosq1,exp0,exp1,r2inv,r6inv,r8inv,Tap,dTap,Vilp;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:552:44: warning: unused variable 'r6inv' [-Wunused-variable]
   double rsq,r,Rcut,rhosq1,exp0,exp1,r2inv,r6inv,r8inv,Tap,dTap,Vilp;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:552:50: warning: unused variable 'r8inv' [-Wunused-variable]
   double rsq,r,Rcut,rhosq1,exp0,exp1,r2inv,r6inv,r8inv,Tap,dTap,Vilp;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:553:16: warning: unused variable 'TSvdw' [-Wunused-variable]
   double frho1,TSvdw,TSvdw2inv,Erep,fsum,rdsq1;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:553:22: warning: unused variable 'TSvdw2inv' [-Wunused-variable]
   double frho1,TSvdw,TSvdw2inv,Erep,fsum,rdsq1;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:555:22: warning: unused variable 'ILP_neighs_j' [-Wunused-variable]
   int *ILP_neighs_i,*ILP_neighs_j;
                      ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lebedeva_z.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lebedeva_z.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lebedeva_z.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_list.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_list.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_list.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJ_AB_MDF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:305:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:309:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&aparm[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:310:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bparm[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:311:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:312:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJ_AB_MDF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:339:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:831:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:835:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:836:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:837:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shift[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:838:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:870:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:871:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:872:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:873:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:874:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:875:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:876:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJExpandCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:967:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:959:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:959:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:962:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:957:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:553:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:529:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:553:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:553:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:559:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:556:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJMDF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:313:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:317:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:318:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:319:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:320:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJMDF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:347:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:489:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:493:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:494:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:495:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:496:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:497:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&scale[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:526:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:527:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:528:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSpline::read_file(const char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:442:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:448:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:478:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSpline::SplineFunction::parse(FILE*, LAMMPS_NS::Error*, bool)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:642:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:645:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:651:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:658:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:662:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:186:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:191:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:195:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:188:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:188:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:280:25: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:279:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               rsq*rcutlj2inv+
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:272:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:270:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:29: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:272:45: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:270:46: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:37: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:272:29: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:277:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
                          ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual double LAMMPS_NS::PairLJSFDipoleSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:625:17: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:624:10: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       rsq*rcutlj2inv+
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:622:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:617:29: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += qtmp * r3inv * qpfac * pjdotr;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:615:30: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += -q[j] * r3inv * pqfac * pidotr;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:617:21: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += qtmp * r3inv * qpfac * pjdotr;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:617:37: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += qtmp * r3inv * qpfac * pjdotr;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:615:38: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += -q[j] * r3inv * pqfac * pidotr;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                             ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSWSpline::read_file(const char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:471:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSWSpline::SplineFunction::parse(FILE*, LAMMPS_NS::Error*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:603:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(line, MAXLINE, fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:609:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(line, MAXLINE, fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:615:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(line, MAXLINE, fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:619:41: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(line, MAXLINE, fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp: In member function 'virtual void LAMMPS_NS::PairMomb::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:310:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:314:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:315:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:316:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:317:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:318:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rr[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:319:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp: In member function 'virtual void LAMMPS_NS::PairMomb::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:351:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:352:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sscale,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:353:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&dscale,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:354:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:355:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSmoothLinear::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:276:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:280:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:281:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:282:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:283:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSmoothLinear::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:310:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:311:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_tersoff_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_tersoff_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_tersoff_table.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp: In member function 'virtual void LAMMPS_NS::PairSRP::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:701:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:706:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:707:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp: In member function 'virtual void LAMMPS_NS::PairSRP::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:735:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:736:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bptype,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:737:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&btype,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:738:33: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&min,sizeof(int),1,fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:739:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&midpoint,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:740:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&exclude,sizeof(int),1,fp);
                                     ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/temper_grem.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2P6::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:388:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:389:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:390:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:391:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:392:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k5[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:393:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k6[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:395:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_k[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:396:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:397:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:399:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:400:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:401:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:402:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineBuck6d::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:334:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:335:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:336:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&th0[1],sizeof(double),atom->nangletypes,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineBuck6d::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:178:47: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
         evdwl = ebuck6d - offset[itype][jtype];
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:163:33: warning: 'r32inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     fpair = forcebuck6d * r32inv;
                                 ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperInversionHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp:315:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kw[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp:316:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&w0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/dynamical_matrix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/dynamical_matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/dynamical_matrix.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:417:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:421:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:422:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d2[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:423:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d3[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:424:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:425:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha_ij[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:426:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:459:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&vdwl_smooth,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:460:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:461:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:462:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:463:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:464:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:449:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:453:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:454:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d2[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:455:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d3[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:456:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:457:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha_ij[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:458:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:492:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&vdwl_smooth,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:493:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&coul_smooth,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:494:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:495:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:496:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:497:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:498:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:191:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:193:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:186:51: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = ebuck6d - offset[itype][jtype];
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBuck6dCoulGaussDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:556:63: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  rsq*f_shift_ij[itype][jtype]);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:555:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:550:47: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck6d = ebuck6d - offset[itype][jtype];
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuck6dCoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:611:71: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:611:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:611:66: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:605:47: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck6d = ebuck6d - offset[itype][jtype];
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:210:72: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:210:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:210:77: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
                                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:204:51: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = ebuck6d - offset[itype][jtype];
                                                   ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_alloy_types.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_alloy_types.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_alloy_types.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp: In member function 'void LAMMPS_NS::FixPhonon::GaussJordan(int, std::complex<double>*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp:787:14: warning: 'irow' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,icol,irow,j,k,l,ll,idr,idc;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp:826:22: warning: 'icol' may be used uninitialized in this function [-Wmaybe-uninitialized]
     idr = icol*n+icol;
                      ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_canonical_coloured.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_canonical_coloured.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_canonical_coloured.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_convex_hull_incremental.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_convex_hull_incremental.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_convex_hull_incremental.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp: In function 'int get_neighbours(void*, size_t, size_t, int, size_t*, int32_t*, double (*)[3])':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp:189:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   if (atom_index < data->nlocal) {
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp:203:14: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (j == atom_index)
              ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_deformation_gradient.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_deformation_gradient.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_deformation_gradient.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_graph_data.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/fix_qeq_reax.cpp: In member function 'virtual void LAMMPS_NS::FixQEqReax::pre_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/fix_qeq_reax.cpp:514:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     qeq_time = t_end - t_start;
                      ^
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/pair_reaxc.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/pair_reaxc.cpp: In member function 'virtual void LAMMPS_NS::PairReaxC::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/pair_reaxc.cpp:547:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     data->timing.nbrs = t_end - t_start;
                               ^
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_forces.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_forces.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_forces.cpp
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_control.cpp: In function 'char Read_Control_File(char*, control_params*, output_controls*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_control.cpp:121:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp: In function 'char Read_Force_Field(FILE*, reax_interaction*, control_params*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:58:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:61:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:80:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAX_LINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:92:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:97:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:98:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:99:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:152:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:178:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:197:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:216:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:236:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( s, MAX_LINE, fp );
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:321:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:331:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:335:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAX_LINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:362:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAX_LINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:483:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:488:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAX_LINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:544:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:549:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAX_LINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:602:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:607:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:673:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:683:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_init_md.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_init_md.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_init_md.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_io_tools.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_io_tools.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_io_tools.cpp
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[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_reset_tools.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_reset_tools.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_reset_tools.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Tridiagonal_Solve(const double*, const double*, double*, double*, double*, unsigned int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:41:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for(i = 1; i < n; i++){
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Natural_Cubic_Spline(LAMMPS_NS::Error*, const double*, const double*, cubic_spline_coef*, unsigned int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:68:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 2; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:72:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:76:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n-2; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:80:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:87:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n; ++i ){
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Complete_Cubic_Spline(LAMMPS_NS::Error*, const double*, const double*, double, double, cubic_spline_coef*, unsigned int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:118:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n; ++i )
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:122:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n; ++i )
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:126:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 0; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:131:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:136:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n; ++i ){
                   ^
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_system_props.cpp.o
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[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_traj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_traj.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_valence_angles.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_valence_angles.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_valence_angles.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp: In function 'void* smalloc(LAMMPS_NS::Error*, rc_bigint, const char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:83:41: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
               "returning NULL.", n, name);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:83:41: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:90:79: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
     snprintf(errmsg, 256, "Failed to allocate %ld bytes for array %s", n, name);
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:90:79: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp: In function 'void* scalloc(LAMMPS_NS::Error*, rc_bigint, rc_bigint, const char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:106:42: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
             "returning NULL.\n", n, name );
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:106:42: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:113:43: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'rc_bigint {aka long long int}' [-Wformat=]
              "returning NULL", name, size );
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:113:43: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'rc_bigint {aka long long int}' [-Wformat=]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:121:84: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
     snprintf(errmsg, 256, "Failed to allocate %ld bytes for array %s", n*size, name);
                                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:121:84: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_vector.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_vector.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_vector.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_traj.cpp: In function 'int Write_Header(reax_system*, control_params*, output_controls*, mpi_datatypes*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_traj.cpp:107:79: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
     sprintf( out_control->line, BIGINT_LINE, "number_of_atoms:", system->bigN );
                                                                               ^
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'void LAMMPS_NS::FixRigidMeso::set_xv()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:330:50: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:329:60: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:329:50: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'void LAMMPS_NS::FixRigidMeso::set_v()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:450:40: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x1 = x[i][1] + ybox*yprd + zbox*yz;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:449:50: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:449:40: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp: In member function 'virtual void LAMMPS_NS::FixMesoMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp:708:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp:677:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp:646:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
                                                             ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/atom_vec_meso.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/atom_vec_meso.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/atom_vec_meso.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_e_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_e_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_e_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'virtual void LAMMPS_NS::PairSMTBQ::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:434:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(ptr,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:437:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(ptr,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:488:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:492:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:500:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:509:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:527:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:541:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:564:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:567:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:620:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:632:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:654:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:667:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:674:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:694:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(ptr,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:697:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:707:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:718:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:721:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:726:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:734:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:737:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:744:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:747:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:757:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:760:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:765:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:791:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:794:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:802:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:812:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp: In constructor 'LAMMPS_NS::FixMesoMove::FixMesoMove(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp:173:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"units") == 0) {
                        ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_rho_atom.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:693:3: warning: 'test' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (test == 0) {
   ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_rhosum.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_rhosum.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_rhosum.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_taitwater.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_taitwater.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_taitwater.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_taitwater_morris.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_taitwater_morris.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_taitwater_morris.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'void LAMMPS_NS::PairSMTBQ::tabqeq()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:1457:70: warning: 'bCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (r > rc) {dij = aCoeff *square(r- rc-nang) *exp(bCoeff*r);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:1457:37: warning: 'aCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (r > rc) {dij = aCoeff *square(r- rc-nang) *exp(bCoeff*r);
                                     ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY/compute_force_tally.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY/compute_heat_flux_tally.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY/compute_stress_tally.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY/compute_stress_tally.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/compute_pressure_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/compute_pressure_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/compute_pressure_uef.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/compute_temp_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/compute_temp_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/compute_temp_uef.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'void LAMMPS_NS::PairSMTBQ::Charge()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:2593:61: warning: 'gp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     QOxInit=max(QOxInit, -0.98* params[1].qform *nQEqcall[gp]/nQEqaall[gp])   ;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:2812:24: warning: 't_init' may be used uninitialized in this function [-Wmaybe-uninitialized]
     dt = t_end - t_init;
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/compute_pressure_uef.cpp: In member function 'virtual void LAMMPS_NS::ComputePressureUef::compute_vector()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/compute_pressure_uef.cpp:143:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
                               ^
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[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/uef_utils.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/uef_utils.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/uef_utils.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp: In member function 'virtual void LAMMPS_NS::AngleCross::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:281:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kss[1],sizeof(double),atom->nangletypes,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:282:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kbs0[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:283:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kbs1[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:284:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r00[1],sizeof(double),atom->nangletypes,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:285:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r01[1],sizeof(double),atom->nangletypes,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:286:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp: In member function 'virtual void LAMMPS_NS::AngleMM3::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp:228:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp:229:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp: In member function 'virtual void LAMMPS_NS::BondMM3::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp:181:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp:182:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp: In member function 'virtual void LAMMPS_NS::ImproperDistHarm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp:259:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp:260:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp: In member function 'virtual void LAMMPS_NS::ImproperSQDistHarm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp:259:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp:260:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_data.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_data.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_data.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:523:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:527:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:528:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:529:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:530:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:563:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:564:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:565:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&truncw,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:566:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:567:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:568:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:569:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:570:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:523:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:527:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:528:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:529:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:530:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:563:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:564:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:565:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&truncw,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:566:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:567:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:568:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:569:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:570:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJSwitch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:658:19: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
     forcelj = expb*lj1[itype][jtype]*r-6.0*lj4[itype][jtype]*r6inv;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:692:36: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:675:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:666:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:666:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:669:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:664:32: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc1;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:682:7: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (r>cut_lj[itype][jtype]-truncw) {
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairMM3Switch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:677:17: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:693:36: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:677:35: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:668:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:668:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:671:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:666:32: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc1;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:683:7: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (r>cut_lj[itype][jtype]-truncw) {
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:193:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ecoul += prefactor2*erfc2*factor_coul;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:184:36: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc1;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:193:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ecoul += prefactor2*erfc2*factor_coul;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:189:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:211:41: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:194:24: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
           evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:201:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (r>cut_lj[itype][jtype]-truncw) {
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:186:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:186:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:197:23: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:196:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ecoul += prefactor2*erfc2*factor_coul;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:187:36: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc1;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:196:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ecoul += prefactor2*erfc2*factor_coul;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:192:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:213:41: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:197:41: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:203:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (r>cut_lj[itype][jtype]-truncw) {
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:189:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:189:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_omp.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_sphere_omp.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_omp.cpp: In member function 'void LAMMPS_NS::BondFENEOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_omp.cpp:140:9: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_omp.cpp: In member function 'void LAMMPS_NS::BondFENEOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_omp.cpp:140:9: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'void LAMMPS_NS::BondFENEExpandOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_expand_omp.cpp:144:9: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'void LAMMPS_NS::BondFENEExpandOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_expand_omp.cpp:144:9: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_morse_omp.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_nonlinear_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_nonlinear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_nonlinear_omp.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_table_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp: In member function 'void LAMMPS_NS::BondQuarticOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp:152:26: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (rsq < TWO_1_3) ebond += 4.0*sr6*(sr6-1.0) + 1.0;
                          ^
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp: In member function 'void LAMMPS_NS::BondQuarticOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp:152:26: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/dihedral_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/dihedral_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/dihedral_class2_omp.cpp
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/dihedral_charmm_omp.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_class2_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:498:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:493:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:477:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp: In member function 'virtual void LAMMPS_NS::FixQEqReaxOMP::pre_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp:347:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     qeq_time = t_end - t_start;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:498:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:493:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:477:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:498:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:493:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:477:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:498:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:493:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:477:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:437:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:432:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:417:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:675:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:662:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:437:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:432:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:417:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:675:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:662:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:675:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:662:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:437:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:432:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:417:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:437:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:432:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:417:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:611:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:598:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:611:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:598:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_harmonic_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:611:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:598:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_umbrella_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_umbrella_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_umbrella_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       pd = -pd;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:235:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
       p = 2.0 - p;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       pd = -pd;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:235:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
       p = 2.0 - p;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       pd = -pd;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cossq_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cossq_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cossq_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_fourier_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_fourier_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_fourier_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_ring_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pppm_tip4p_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pppm_tip4p_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pppm_tip4p_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:112:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:48:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:110:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:47:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:110:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:47:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_atomonly_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:118:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:116:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:49:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:116:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:49:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:120:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:49:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:118:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:48:46: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:118:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:48:41: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:112:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:110:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:49:36: note: 'iatom' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:110:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:49:31: note: 'imol' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                               ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:112:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:110:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:49:36: note: 'iatom' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:110:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:49:31: note: 'imol' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                               ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:117:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:115:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:49:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:115:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:49:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:126:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:124:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:53:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:124:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:53:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:118:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:49:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:147:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:48:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:147:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:48:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:123:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:121:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:48:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:121:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:48:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:124:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:122:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:50:46: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:122:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:50:41: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                         ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:120:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:155:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:49:46: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:155:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:49:41: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:133:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:131:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:50:46: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:131:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:50:41: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:113:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:111:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:51:36: note: 'iatom' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:111:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:51:31: note: 'imol' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                               ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:121:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:119:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:54:36: note: 'iatom' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:119:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:54:31: note: 'imol' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                               ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:131:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:129:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:50:46: note: 'iatom' was declared here
   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:129:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:50:41: note: 'imol' was declared here
   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:148:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:146:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:54:54: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:146:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:54:49: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:165:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (which == 0) neighptr_middle[n_middle++] = j;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:54:40: note: 'n_middle' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:190:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:57:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:94:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:81:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:81:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:81:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:150:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:192:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:53:54: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:192:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:53:49: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:166:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (which == 0) neighptr_middle[n_middle++] = j;
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:53:40: note: 'n_middle' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:236:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:56:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:93:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:80:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:80:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:80:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:155:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:153:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:53:54: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:153:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:53:49: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:172:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (which == 0) neighptr_middle[n_middle++] = j;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:53:40: note: 'n_middle' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:197:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:56:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:93:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:80:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:80:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:80:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:145:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:143:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:55:47: note: 'iatom' was declared here
   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:143:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:55:42: note: 'imol' was declared here
   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:160:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (which == 0) neighptr_middle[n_middle++] = j;
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:55:33: note: 'n_middle' was declared here
   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:184:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:58:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:22:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:97:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:84:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:84:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:84:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:163:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:161:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:56:57: note: 'iatom' was declared here
   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:161:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:56:52: note: 'imol' was declared here
   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:179:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (which == 0) neighptr_middle[n_middle++] = j;
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:56:43: note: 'n_middle' was declared here
   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:203:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:59:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:22:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:98:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:85:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:85:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:85:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:177:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:177:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
             ^
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_debye_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_dsf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_dsf_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_wolf_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_dpd_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_dpd_tstat_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp:147:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = epsilon[itype][jtype]*
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp:145:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp:147:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = epsilon[itype][jtype]*
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp:145:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:154:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:154:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:160:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_expand_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_expand_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_expand_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:160:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:13: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:174:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:13: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:174:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:180:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:180:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp:146:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp:146:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:13: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:13: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_soft_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_ufm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_ufm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_ufm_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a * tb->e[itable] + b * tb->e[itable+1] +
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:185:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a * tb->e[itable] + b * tb->e[itable+1] +
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:185:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
             ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gayberne_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gayberne_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gayberne_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_resquared_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_resquared_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_resquared_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp:146:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp:146:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_poly_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_poly_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:170:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:171:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:170:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:171:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:211:19: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (EVFLAG) ev_tally_thr(this, i,j,nlocal,NEWTON_PAIR,
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:204:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       fztmp += delz*fpair;
       ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_poly_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_poly_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:211:19: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (EVFLAG) ev_tally_thr(this, i,j,nlocal,NEWTON_PAIR,
                   ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:204:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       fztmp += delz*fpair;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:204:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:204:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:259:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hooke_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hooke_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hooke_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:259:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hooke_history_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:179:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:176:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:179:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:176:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                    ^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:174:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:174:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                    ^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:186:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:191:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:195:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:186:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:191:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:195:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:181:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:190:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:181:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:190:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:454:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:466:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:466:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:454:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:454:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:454:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:443:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:443:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_adp_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_adp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_adp_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_inner(int, int, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1335:28: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1331:28: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1304:28: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1300:28: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_middle(int, int, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1597:28: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1593:28: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1566:28: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1562:28: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
                            ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::TORSION_thr(int, int, int, int, double*, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:999:77: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ev_tally4_thr(this,i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl,thr);
                                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::FLJ_thr(int, int, int, int, int, double*, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:569:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair = dC*dwij / rij;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:613:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:608:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:608:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:613:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:584:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:580:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkjS / rikS;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:603:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:608:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:613:45: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:608:45: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:584:40: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:603:45: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:639:84: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
             v_tally4_thr(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS,thr);
                                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:639:84: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_morse_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_comb_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_comb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_comb_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_omp.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyOMP::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:187:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:200:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair += D_i * rhojp * t1;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eim_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eim_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eim_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSOMP::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:189:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:205:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_rebo_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_rebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_rebo_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_sw_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_sw_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_sw_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_omp.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_zbl_omp.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_vashishta_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_vashishta_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_vashishta_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_vashishta_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_vashishta_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_vashishta_table_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:420:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_lps_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_lps_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_lps_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:391:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:420:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:391:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:420:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:391:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:420:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:391:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:404:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:400:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:375:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:371:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_pmb_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_pmb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_pmb_omp.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (drudetype[type[i]] != NOPOL_TYPE &&
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:15: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:15: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = qi*qj * table;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:15: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:241:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:252:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:241:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (drudetype[type[i]] != NOPOL_TYPE &&
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:15: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:15: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = qi*qj * table;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:15: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:241:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:252:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:241:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j != di_closest){
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j != di_closest){
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j != di_closest){
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j != di_closest){
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:157:13: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = lj1[itype][jtype] * 4.0 * epsilon[itype][jtype] *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:154:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:157:13: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = lj1[itype][jtype] * 4.0 * epsilon[itype][jtype] *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:154:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:179:13: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = lj1[itype][jtype] * 4.0 * epsilon[itype][jtype] *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:173:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:179:13: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = lj1[itype][jtype] * 4.0 * epsilon[itype][jtype] *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:173:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:435:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:406:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:435:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:406:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:435:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:406:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp: In member function 'void LAMMPS_NS::PairAGNIOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp:159:17: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (EVFLAG) ev_tally_xyz_full_thr(this,i,0.0,0.0,
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp:159:17: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp:159:17: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:406:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_diel_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_diel_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_diel_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:435:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:390:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:386:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:419:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:415:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_edip_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_edip_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_edip_omp.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gauss_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gauss_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gauss_cut_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_meam_spline_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_meam_spline_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_meam_spline_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_table_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_asphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_asphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_asphere_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp: In member function 'virtual void LAMMPS_NS::PairReaxCOMP::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp:223:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     data->timing.nbrs = t_end - t_start;
                               ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bond_orders_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bond_orders_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bond_orders_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_nonbonded_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_nonbonded_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_nonbonded_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bonds_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bonds_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bonds_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:780:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:775:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:759:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:780:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:775:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:759:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:780:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:775:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:759:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:780:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:775:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:759:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:957:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:944:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:957:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:944:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:957:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:944:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp: In function 'int Init_ListsOMP(reax_system*, control_params*, simulation_data*, storage*, reax_list**, mpi_datatypes*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp:54:12: warning: variable 'comm' set but not used [-Wunused-but-set-variable]
   MPI_Comm comm;
            ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_forces_omp.cpp.o
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[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_multi_body_omp.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 ecoul = prefactor*erfc;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = etable[itable] + fraction*detable[itable];
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 ecoul = prefactor*erfc;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = etable[itable] + fraction*detable[itable];
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_long_coul_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_long_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_long_coul_long_opt.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_opt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:437:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:437:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_alloy_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_alloy_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_alloy_opt.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_fs_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_fs_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_fs_opt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/fix_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/fix_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/fix_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pppm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pppm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pppm_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_beck_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_beck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_beck_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_beck_gpu.cpp: In member function 'void LAMMPS_NS::PairBeckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_beck_gpu.cpp:240:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_gpu.cpp: In member function 'void LAMMPS_NS::PairBornGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_gpu.cpp:242:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp:281:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp:278:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp:278:72: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp:282:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp:237:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp:249:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp:249:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_debye_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_debye_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_dsf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_dsf_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_tstat_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_tstat_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_tstat_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp: In member function 'void LAMMPS_NS::PairDPDGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp:405:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp: In member function 'void LAMMPS_NS::PairGaussGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp:230:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJ96CutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp:226:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCubicGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp:234:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp:231:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp:236:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp:248:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:252:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:252:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:255:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:282:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:283:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:269:28: warning: 'forcecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:276:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:282:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp:239:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp: In member function 'void LAMMPS_NS::PairLJGromacsGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp:235:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp:241:74: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
               if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                          ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairMIECutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp:225:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp: In member function 'void LAMMPS_NS::PairMorseGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp:221:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp: In member function 'void LAMMPS_NS::PairSoftGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp:232:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp: In member function 'void LAMMPS_NS::PairTableGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp:333:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp:333:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp:330:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp:338:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp: In member function 'void LAMMPS_NS::PairUFMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp:235:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp:224:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp: In member function 'void LAMMPS_NS::PairZBLGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp:232:59: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp:237:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp: In member function 'void LAMMPS_NS::PairRESquaredGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp:310:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp:313:73: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                       fforce[2],-r12[0],-r12[1],-r12[2]);
                                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp: In member function 'void LAMMPS_NS::PairGayBerneGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp:335:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp:338:63: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                       -r12[0],-r12[1],-r12[2]);
                                                               ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_gpu.cpp.o
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[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2GPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_gpu.cpp:223:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:272:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:273:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:276:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:276:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp:302:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       f[i][2] += delz*fpair;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp:298:36: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (eflag) evdwl *= factor_lj;
                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp:235:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:325:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:326:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:330:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:329:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:284:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:281:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:281:72: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:285:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp:306:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp:311:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp:308:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp:308:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:353:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:351:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:349:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:349:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:353:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:358:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:70: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:54: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:47: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:31: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:70: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:54: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:417:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp:282:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp:283:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp:287:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp:286:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp:274:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp:275:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp:279:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp:279:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp:281:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp:286:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp:283:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp:283:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:317:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:322:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:326:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:326:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:305:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:310:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:314:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:307:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:307:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:283:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:278:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:287:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'ecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,ecoul,fpair,delx,dely,delz);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_sw_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_sw_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_sw_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSGPU::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:376:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:377:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:378:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:379:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:404:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:426:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyGPU::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp:433:55: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (me == 0) grab(fptr,file->nr,&file->rhor[i][1]);
                                                       ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_mod_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_mod_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_mod_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:442:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_zbl_gpu.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:311:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:316:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:320:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:313:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:313:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:388:25: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:387:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               rsq*rcutlj2inv +
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:380:35: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv * qpfac * pjdotr;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:378:36: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv * pqfac * pidotr;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:29: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:380:43: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv * qpfac * pjdotr;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:378:44: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv * pqfac * pidotr;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:37: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:380:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv * qpfac * pjdotr;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:385:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) +
                          ^
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[100%] Building CXX object CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/main.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/STUBS -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/main.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/main.cpp
[100%] Linking CXX executable lmp
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/lmp.dir/link.txt --verbose=1
/usr/bin/c++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp  -Wl,-z,relro -rdynamic CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/main.cpp.o  -o lmp -Wl,-rpath,/builddir/build/BUILD/lammps-stable_7Aug2019/serial: liblammps.so.0 libmpi_stubs.a -ljpeg -lpng -lfftw3 -lpython3.6m -lvoro++ -lkim-api libcsnompi.a -lm libpoems.a libatc.a -lopenblas libcolvars.a libh5md.a -lhdf5 -lsz -lz -ldl -lm libgpu.a -lOpenCL 
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
[100%] Built target lmp
make[1]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
/usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles 0
~/build/BUILD/lammps-stable_7Aug2019
+ popd
+ test -n ''
+ for mpi in ''\'''\''' mpich openmpi openmpi3
+ test -n mpich
+ module load mpi/mpich-arm
++ /usr/bin/modulecmd sh load mpi/mpich-arm
+ eval LD_LIBRARY_PATH=/usr/lib/mpich/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/mpich-arm' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/mpich:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib/mpich/bin' ';export' 'MPI_BIN;MPI_COMPILER=mpich-arm' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/mpich-arm' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib/mpich' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/mpich-arm' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib/mpich/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/mpich' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/mpich' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_mpich' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/mpich-arm' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib/mpich/lib/pkgconfig:/usr/lib/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;PYTHONPATH=/usr/lib/python2.7/site-packages/mpich' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/mpich-arm' ';export' '_LMFILES_;'
++ LD_LIBRARY_PATH=/usr/lib/mpich/lib
++ export LD_LIBRARY_PATH
++ LOADEDMODULES=mpi/mpich-arm
++ export LOADEDMODULES
++ MANPATH=/usr/share/man/mpich:/usr/share/man:/usr/local/share/man
++ export MANPATH
++ MPI_BIN=/usr/lib/mpich/bin
++ export MPI_BIN
++ MPI_COMPILER=mpich-arm
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/mpich-arm
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib/mpich
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/mpich-arm
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib/mpich/lib
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/mpich
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/mpich
++ export MPI_PYTHON_SITEARCH
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/mpich-arm
++ export MPI_SYSCONFIG
++ PATH=/usr/lib/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ PKG_CONFIG_PATH=/usr/lib/mpich/lib/pkgconfig:/usr/lib/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ PYTHONPATH=/usr/lib/python2.7/site-packages/mpich
++ export PYTHONPATH
++ _LMFILES_=/etc/modulefiles/mpi/mpich-arm
++ export _LMFILES_
+ mkdir -p mpich
~/build/BUILD/lammps-stable_7Aug2019/mpich ~/build/BUILD/lammps-stable_7Aug2019
+ pushd mpich
+ cp -al ../lammps-testing-d0394a77fa2b4b2d545a73ea092cf6de7616aac8 tests/
+ CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ export CFLAGS
+ CXXFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ export CXXFLAGS
+ FFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro '
+ export LDFLAGS
++ test -z mpich
+ /usr/bin/cmake3 -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DBUILD_SHARED_LIBS:BOOL=ON -C ../cmake/presets/all_on.cmake -C ../cmake/presets/nolib.cmake -DBUILD_LIB=ON -DPKG_PYTHON=ON -DPKG_VORONOI=ON -DPKG_USER-ATC=ON -DPKG_USER-H5MD=ON -DPKG_KIM=ON -DBUILD_TOOLS=ON -DENABLE_TESTING=ON -DPYTHON_INSTDIR=/usr/lib/python3.6/site-packages -DCMAKE_INSTALL_SYSCONFDIR=/etc -DPKG_GPU=ON -DGPU_API=OpenCL -DBUILD_OMP=ON -DFFT=FFTW3 -DPKG_USER-INTEL=OFF -DCMAKE_INSTALL_BINDIR=/usr/lib/mpich/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib/mpich/lib -DLAMMPS_MACHINE=mpich -DLAMMPS_LIB_SUFFIX=mpich -DCMAKE_INSTALL_MANDIR=/usr/share/man/mpich -DBUILD_MPI=ON -DPKG_MPIIO=ON '-DCMAKE_EXE_LINKER_FLAGS=-Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/mpich/lib -Wl,--enable-new-dtags' '-DCMAKE_SHARED_LINKER_FLAGS=-Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/mpich/lib -Wl,--enable-new-dtags' -DLAMMPS_TESTING_SOURCE_DIR=/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/tests ../cmake
loading initial cache file ../cmake/presets/all_on.cmake
loading initial cache file ../cmake/presets/nolib.cmake
-- The CXX compiler identification is GNU 4.8.5
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Could NOT find Git (missing: GIT_EXECUTABLE) 
-- Running check for auto-generated files from make-based build system
-- Found MPI_CXX: /usr/lib/mpich/lib/libmpichcxx.so (found version "3.0") 
-- Found MPI: TRUE (found version "3.0")  
-- Found OpenMP_CXX: -fopenmp (found version "3.1") 
-- Found OpenMP: TRUE (found version "3.1")  
-- Looking for C++ include omp.h
-- Looking for C++ include omp.h - found
-- Looking for sgemm_
-- Looking for sgemm_ - not found
-- Looking for C++ include pthread.h
-- Looking for C++ include pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - found
-- Found Threads: TRUE  
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- Found BLAS: /usr/lib/libopenblas.so  
-- Looking for cheev_
-- Looking for cheev_ - found
-- A library with LAPACK API found.
-- Found JPEG: /usr/lib/libjpeg.so (found version "62") 
-- Found PNG: /usr/lib/libpng.so (found version "1.5.13") 
-- Found ZLIB: /usr/lib/libz.so (found version "1.2.7") 
-- Found GZIP: /usr/bin/gzip  
-- Could NOT find FFMPEG (missing: FFMPEG_EXECUTABLE) 
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.27.1") 
-- Checking for module 'fftw3'
--   Found fftw3, version 3.3.3
-- Found FFTW3: /usr/lib/libfftw3.so  
-- Found PythonLibs: /usr/lib/libpython3.6m.so (found version "3.6.8") 
-- Found VORO: /usr/lib/libvoro++.so  
-- Could NOT find CURL (missing: CURL_LIBRARY CURL_INCLUDE_DIR) 
-- Checking for module 'libkim-api>=2.0'
--   Found libkim-api, version 2.1.3
-- Found KIM-API: kim-api  
-- Looking for C++ include cmath
-- Looking for C++ include cmath - found
-- The C compiler identification is GNU 4.8.5
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- HDF5: Using hdf5 compiler wrapper to determine C configuration
-- Found HDF5: /usr/lib/libhdf5.so;/usr/lib/libsz.so;/usr/lib/libz.so;/usr/lib/libdl.so;/usr/lib/libm.so (found version "1.8.12")  
-- Looking for CL_VERSION_2_2
-- Looking for CL_VERSION_2_2 - found
-- Found OpenCL: /usr/lib/libOpenCL.so (found version "2.2") 
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/atom_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/beck_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/born_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/born_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/born_coul_long_cs_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/born_coul_wolf_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/born_coul_wolf_cs_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/buck_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/buck_coul_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/buck_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/charmm_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/colloid_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/coul_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/coul_debye_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/coul_dsf_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/coul_long_cs_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/device_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/dipole_lj_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/dipole_lj_sf_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/dipole_long_lj_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/dpd_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/eam_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/ellipsoid_nbor_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/gauss_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/lj_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/lj96_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/lj_class2_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/lj_coul_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/lj_coul_debye_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/lj_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/lj_coul_msm_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/lj_cubic_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/lj_dsf_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/lj_expand_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/lj_expand_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/lj_gromacs_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/lj_sdk_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/lj_sdk_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/mie_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/morse_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/neighbor_cpu_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/neighbor_gpu_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/pppm_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/soft_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/sw_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/table_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/ufm_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/vashishta_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/yukawa_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/yukawa_colloid_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/zbl_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/gayberne_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/gayberne_lj_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/re_squared_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/re_squared_lj_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/tersoff_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/tersoff_zbl_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu/tersoff_mod_cl.h...
-- Generating style_angle.h...
-- Generating style_atom.h...
-- Generating style_body.h...
-- Generating style_bond.h...
-- Generating style_command.h...
-- Generating style_compute.h...
-- Generating style_dihedral.h...
-- Generating style_dump.h...
-- Generating style_fix.h...
-- Generating style_improper.h...
-- Generating style_integrate.h...
-- Generating style_kspace.h...
-- Generating style_minimize.h...
-- Generating style_nbin.h...
-- Generating style_npair.h...
-- Generating style_nstencil.h...
-- Generating style_ntopo.h...
-- Generating style_pair.h...
-- Generating style_reader.h...
-- Generating style_region.h...
-- Generating packages_angle.h...
-- Generating packages_atom.h...
-- Generating packages_body.h...
-- Generating packages_bond.h...
-- Generating packages_command.h...
-- Generating packages_compute.h...
-- Generating packages_dihedral.h...
-- Generating packages_dump.h...
-- Generating packages_fix.h...
-- Generating packages_improper.h...
-- Generating packages_integrate.h...
-- Generating packages_kspace.h...
-- Generating packages_minimize.h...
-- Generating packages_nbin.h...
-- Generating packages_npair.h...
-- Generating packages_nstencil.h...
-- Generating packages_ntopo.h...
-- Generating packages_pair.h...
-- Generating packages_reader.h...
-- Generating packages_region.h...
-- Generating lmpinstalledpkgs.h...
-- Skipping building 'chain.x' with Ninja build tool due to lack of Fortran support
-- The Fortran compiler identification is GNU 4.8.5
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran  -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Found PythonInterp: /usr/bin/python3.6 (found version "3.6.8") 
-- Running test discovery...
-- Found 53 tests.
-- Building package: ASPHERE
-- Building package: BODY
-- Building package: CLASS2
-- Building package: COLLOID
-- Building package: CORESHELL
-- Building package: DIPOLE
-- Building package: GRANULAR
-- Building package: KSPACE
-- Building package: MANYBODY
-- Building package: MC
-- Building package: MESSAGE
-- Building package: MISC
-- Building package: MOLECULE
-- Building package: PERI
-- Building package: POEMS
-- Building package: QEQ
-- Building package: REPLICA
-- Building package: RIGID
-- Building package: SHOCK
-- Building package: SPIN
-- Building package: SNAP
-- Building package: SRD
-- Building package: KIM
-- Building package: PYTHON
-- Building package: MPIIO
-- Building package: VORONOI
-- Building package: USER-ATC
-- Building package: USER-BOCS
-- Building package: USER-CGDNA
-- Building package: USER-MESO
-- Building package: USER-CGSDK
-- Building package: USER-COLVARS
-- Building package: USER-DIFFRACTION
-- Building package: USER-DPD
-- Building package: USER-DRUDE
-- Building package: USER-EFF
-- Building package: USER-FEP
-- Building package: USER-H5MD
-- Building package: USER-MANIFOLD
-- Building package: USER-MEAMC
-- Building package: USER-MGPT
-- Building package: USER-MISC
-- Building package: USER-MOFFF
-- Building package: USER-PHONON
-- Building package: USER-PTM
-- Building package: USER-QTB
-- Building package: USER-REAXC
-- Building package: USER-SDPD
-- Building package: USER-SMTBQ
-- Building package: USER-SPH
-- Building package: USER-TALLY
-- Building package: USER-UEF
-- Building package: USER-YAFF
-- Building package: USER-OMP
-- Building package: OPT
-- Building package: GPU
-- The following packages have been found:
 * MPI
 * OpenMP
 * LAPACK
 * Threads
 * BLAS
 * JPEG
 * PNG
 * ZLIB
 * FFTW3
 * PythonLibs
 * VORO
 * PkgConfig
 * KIM-API
 * HDF5
 * OpenCL
 * PythonInterp
-- <<< Build configuration >>>
   Build type       
   Install path     /usr
   Compilers and Flags:
   C++ Compiler     /usr/bin/c++
       Type         GNU
       Version      4.8.5
   C++ Flags        -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp 
   Defines          LAMMPS_SMALLBIG;LAMMPS_MEMALIGN=64;LAMMPS_JPEG;LAMMPS_PNG;LAMMPS_GZIP;FFT_FFTW3;LMP_PYTHON;LMP_MPIIO;LMP_USER_OMP
-- Fortran Compiler /usr/bin/gfortran
           Type     GNU
           Version  4.8.5
   Fortran Flags    -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules 
-- C Compiler /usr/bin/cc
     Type     GNU
     Version  4.8.5
     C Flags    
-- Linker flags:
   Executable      -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/mpich/lib -Wl,--enable-new-dtags
-- Shared libraries  -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/mpich/lib -Wl,--enable-new-dtags
-- Link libraries: /usr/lib/mpich/lib/libmpichcxx.so;/usr/lib/mpich/lib/libmpich.so;/usr/lib/mpich/lib/libopa.so;/usr/lib/mpich/lib/libmpl.so;/usr/lib/librt.so;/usr/lib/libpthread.so;/usr/lib/libjpeg.so;/usr/lib/libpng.so;/usr/lib/libz.so;/usr/lib/libfftw3.so;/usr/lib/libpython3.6m.so;/usr/lib/libvoro++.so;-lkim-api;cslib;m;poems;atc;colvars;h5md;gpu
-- Using mpi with headers in /usr/include/mpich-arm and /usr/lib/mpich/lib/libmpichcxx.so;/usr/lib/mpich/lib/libmpich.so;/usr/lib/mpich/lib/libopa.so;/usr/lib/mpich/lib/libmpl.so;/usr/lib/librt.so;/usr/lib/libpthread.so
-- GPU Api: OPENCL
-- OCL Tune: GENERIC
-- GPU Precision: MIXED
-- Using FFTW3 as primary FFT library
-- Using double precision FFTs
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:
    CMAKE_CXX_FLAGS_RELEASE
    CMAKE_C_FLAGS_RELEASE
    CMAKE_Fortran_FLAGS_RELEASE
    INCLUDE_INSTALL_DIR
    LIB_INSTALL_DIR
    SHARE_INSTALL_PREFIX
    SYSCONF_INSTALL_DIR
-- Build files have been written to: /builddir/build/BUILD/lammps-stable_7Aug2019/mpich
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Scanning dependencies of target msi2lmp
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Scanning dependencies of target cslib
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/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:318.14:
      iseed = sseed                                                     
              1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:97.15:
          x2 = xboundlo + random(iseed)*xprd                            
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Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:98.15:
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               1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:99.15:
          z2 = zboundlo + random(iseed)*zprd                            
               1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:132.21:
 10         xinner = 2.0*random(iseed) - 1.0                            
                     1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:133.21:
            yinner = 2.0*random(iseed) - 1.0                            
                     1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:134.21:
            zinner = 2.0*random(iseed) - 1.0                            
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Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:147.17:
            x2 = x1 + xsurf*bondlength(iset)                            
                 1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:148.17:
            y2 = y1 + ysurf*bondlength(iset)                            
                 1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:149.17:
            z2 = z1 + zsurf*bondlength(iset)                            
                 1
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/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/cslib.cpp: In member function 'void CSLIB_NS::CSlib::onefield(int, int, int&, int&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/cslib.cpp:649:26: warning: 'bigbytes' may be used uninitialized in this function [-Wmaybe-uninitialized]
   nbytes = (int) bigbytes;
                          ^
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[  1%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/SearchAndFill.c.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_YES -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg.cpp
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_YES -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp: In member function 'virtual void CSLIB_NS::MsgFile::recv(int&, int*&, int&, char*&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp:125:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(lengths,sizeof(int),2,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp:132:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(header,sizeof(int),nheader,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp:135:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(buf,1,nbuf,fp);
                                    ^
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[  2%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_two.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_two.cpp: In member function 'void CSLIB_NS::MsgMPITwo::init(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_two.cpp:60:39: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(port,MPI_MAX_PORT_NAME,fp);
                                       ^
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make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:182:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (_ef_atom)
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:196:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
       if (_vf_atom)
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:231:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (_ef_atom)
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:250:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
       if (_vf_atom)
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp: In instantiation of 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:313:16:   required from here
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:224:7: warning: unused variable 'ii' [-Wunused-variable]
   int ii, vstart=0, iend=_inum;
       ^
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Coupling.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.cpp:17:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/usr/bin/make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/mpich /builddir/build/BUILD/lammps-stable_7Aug2019/mpich /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/CMakeFiles/poems.dir/DependInfo.cmake --color=
Scanning dependencies of target poems
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
/usr/bin/make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
[  2%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/body.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/body.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/body.cpp
[  2%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/body23joint.cpp.o
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[  3%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingEnergy.cpp.o
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[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.cpp:17:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/fixedpoint.cpp.o
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[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/mat6x6.cpp.o
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In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dpd.cpp:17:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
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[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/onsolver.cpp.o
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In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/particle.cpp.o
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[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemsobject.cpp.o
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[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.cpp.o
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In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.h: In constructor 'TreeNode::TreeNode(const int&, TreeNode*, TreeNode*, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.h:36:6: warning: 'TreeNode::data' will be initialized after [-Wreorder]
  int data;
      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.h:32:12: warning:   'TreeNode* TreeNode::left' [-Wreorder]
  TreeNode *left;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.cpp:22:1: warning:   when initialized here [-Wreorder]
 TreeNode::TreeNode (const int & item, TreeNode *lptr,TreeNode *rptr,
 ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/sphericaljoint.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/sphericaljoint.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/system.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/virtualrowmatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/virtualrowmatrix.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/workspace.cpp.o
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[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.cpp.o
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[  6%] Building CXX object CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DUCL_OPENCL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp:25:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentum.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentum.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[  6%] Linking CXX executable ocl_get_devices
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/ocl_get_devices.dir/link.txt --verbose=1
/usr/bin/c++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp  -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/mpich/lib -Wl,--enable-new-dtags -rdynamic CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp.o  -o ocl_get_devices -lOpenCL 
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
[  6%] Built target ocl_get_devices
/usr/bin/make -f CMakeFiles/binary2txt.dir/build.make CMakeFiles/binary2txt.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/mpich /builddir/build/BUILD/lammps-stable_7Aug2019/mpich /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/CMakeFiles/binary2txt.dir/DependInfo.cmake --color=
Scanning dependencies of target binary2txt
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
/usr/bin/make -f CMakeFiles/binary2txt.dir/build.make CMakeFiles/binary2txt.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
[  6%] Building CXX object CMakeFiles/binary2txt.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/binary2txt.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp: In function 'int main(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:97:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&ntimestep,sizeof(bigint),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:107:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&natoms,sizeof(bigint),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:108:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&triclinic,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:109:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&boundary[0][0],6*sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:110:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&xlo,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:111:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&xhi,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:112:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&ylo,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:113:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&yhi,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:114:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&zlo,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:115:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&zhi,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:117:32: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(&xy,sizeof(double),1,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:118:32: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(&xz,sizeof(double),1,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:119:32: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(&yz,sizeof(double),1,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:121:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&size_one,sizeof(int),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:122:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&nchunk,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:159:28: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(&n,sizeof(int),1,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:171:32: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(buf,sizeof(double),n,fp);
                                ^
[  6%] Linking CXX executable binary2txt
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/binary2txt.dir/link.txt --verbose=1
/usr/bin/c++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp  -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/mpich/lib -Wl,--enable-new-dtags -rdynamic CMakeFiles/binary2txt.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp.o  -o binary2txt 
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
[  6%] Built target binary2txt
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.cpp
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs_ext.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.cpp.o
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[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.cpp
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_ext.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_ext.cpp
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_angles.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_angles.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_angles.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.cpp
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/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long_ext.cpp
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_ext.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long_ext.cpp
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_coordnums.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_coordnums.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_coordnums.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_distances.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_distances.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_distances.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_ext.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs_ext.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_gpath.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_gpath.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_gpath.cpp
[  8%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_protein.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_protein.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_protein.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_rotations.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_rotations.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_rotations.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvardeps.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvardeps.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvardeps.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_alloy_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_alloy_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_alloy_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_alloy_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp: In instantiation of 'void LAMMPS_AL::EAM<numtyp, acctyp>::loop(bool, bool) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp:533:16:   required from here
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp:448:14: warning: variable 'vflag' set but not used [-Wunused-but-set-variable]
   int eflag, vflag;
              ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_fs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_fs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_fs_ext.cpp
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvargrid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvargrid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvargrid.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_fs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.cpp:27:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarmodule.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarmodule.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarmodule.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferPartitionOfUnity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferPartitionOfUnity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferPartitionOfUnity.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye_ext.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarparse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarparse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarparse.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferPartitionOfUnity.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomToMoleculeTransfer.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomToMoleculeTransfer.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomToMoleculeTransfer.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.cpp
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarproxy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarproxy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarproxy.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_ext.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.cpp
[ 12%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarscript.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarscript.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarscript.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long_ext.cpp
[ 12%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvartypes.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvartypes.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvartypes.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie_ext.cpp
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/BodyForce.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/BodyForce.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/BodyForce.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CBLattice.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CBLattice.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CBLattice.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.cpp
[ 13%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarvalue.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarvalue.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarvalue.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_kernel.h:27:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.cpp:17:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.cpp:18:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.cpp:25:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CauchyBorn.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CauchyBorn.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CauchyBorn.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared_ext.cpp
[ 13%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.cpp:27:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp: In member function 'void Lepton::CompiledExpression::compileExpression(const Lepton::ExpressionTreeNode&, std::vector<std::pair<Lepton::ExpressionTreeNode, int> >&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:91:49: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i = 0; i < node.getChildren().size(); i++) {
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:113:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             for (int i = 1; i < args.size(); i++)
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp: In member function 'double Lepton::CompiledExpression::evaluate() const':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:170:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i = 0; i < variablesToCopy.size(); i++)
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:175:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int step = 0; step < operation.size(); step++) {
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:180:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             for (int i = 0; i < args.size(); i++)
                                           ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CbPotential.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CbPotential.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CbPotential.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ChargeRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ChargeRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ChargeRegulator.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft_ext.cpp
[ 14%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionProgram.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw_ext.cpp
[ 14%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const std::vector<Lepton::ExpressionTreeNode>&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:40:55: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (operation->getNumArguments() != children.size())
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&, const Lepton::ExpressionTreeNode&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:47:55: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (operation->getNumArguments() != children.size())
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:53:55: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (operation->getNumArguments() != children.size())
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:58:55: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (operation->getNumArguments() != children.size())
                                                       ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.cpp
[ 14%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Operation.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Operation.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Operation.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ParsedExpression.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ParsedExpression.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ParsedExpression.cpp
[ 14%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table_ext.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ParsedExpression Lepton::Parser::parse(const string&, const std::map<std::basic_string<char>, Lepton::CustomFunction*>&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:181:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             if (pos != tokens.size())
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:190:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         if (pos != tokens.size())
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ExpressionTreeNode Lepton::Parser::parsePrecedence(const std::vector<Lepton::ParseToken>&, int&, const std::map<std::basic_string<char>, Lepton::CustomFunction*>&, const std::map<std::basic_string<char>, Lepton::ExpressionTreeNode>&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:201:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (pos == tokens.size())
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:227:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:241:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
                                ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ChargeRegulator.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ChargeRegulator.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 14%] Linking CXX static library libcolvars.a
/usr/bin/cmake3 -P CMakeFiles/colvars.dir/cmake_clean_target.cmake
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/colvars.dir/link.txt --verbose=1
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod_ext.cpp
/usr/bin/ar qc libcolvars.a  CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvar.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvaratoms.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_abf.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_alb.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_histogram.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_meta.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_restraint.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_angles.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_coordnums.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_distances.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_gpath.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_protein.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_rotations.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvardeps.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvargrid.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarmodule.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarparse.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarproxy.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarscript.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvartypes.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarvalue.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Operation.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ParsedExpression.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp.o
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make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
[ 14%] Built target colvars
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ConcentrationRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ConcentrationRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ConcentrationRegulator.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronChargeDensity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronChargeDensity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronChargeDensity.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.cpp:26:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm_ext.cpp:22:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronDragPower.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronDragPower.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronDragPower.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronFlux.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronFlux.cpp
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatCapacity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatCapacity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatCapacity.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_ext.cpp
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatFlux.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatFlux.cpp
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronPhononExchange.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronPhononExchange.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronPhononExchange.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.cpp
/usr/bin/ranlib libgpu.a
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
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[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.cpp
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Element.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Element.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Element.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Interpolate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Interpolate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Interpolate.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Mesh.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Mesh.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Mesh.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Function.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Function.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Function.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.h:9,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FundamentalAtomicQuantity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FundamentalAtomicQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FundamentalAtomicQuantity.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/GhostManager.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/GhostManager.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/GhostManager.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/InterscaleOperators.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/InterscaleOperators.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/InterscaleOperators.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Array.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Array2D.h:9,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KernelFunction.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KernelFunction.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KernelFunction.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KinetoThermostat.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KinetoThermostat.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KinetoThermostat.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MPI_Wrappers.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MPI_Wrappers.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MPI_Wrappers.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KinetoThermostat.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KinetoThermostat.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Material.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Material.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Material.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MPI_Wrappers.cpp:2:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MeshReader.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MeshReader.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MeshReader.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MoleculeSet.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MoleculeSet.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MoleculeSet.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp: In member function 'void ATC::OutputManager::read_restart_file(std::string, ATC::RESTART_LIST*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp:164:42: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&myVal,sizeof(double),1,fp);
                                          ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PaqAtcUtility.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PaqAtcUtility.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PaqAtcUtility.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h: At global scope:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PolynomialSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PolynomialSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PolynomialSolver.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PrescribedDataManager.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PrescribedDataManager.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PrescribedDataManager.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Quadrature.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Quadrature.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Quadrature.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SchrodingerSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SchrodingerSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SchrodingerSolver.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SpeciesTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SpeciesTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SpeciesTimeIntegrator.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Stress.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Stress.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Stress.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ThermalTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ThermalTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ThermalTimeIntegrator.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Thermostat.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Thermostat.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Thermostat.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SchrodingerSolver.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SchrodingerSolver.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeFilter.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeFilter.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeFilter.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeIntegrator.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ThermalTimeIntegrator.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ThermalTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/DenseVector.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ViscousStress.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ViscousStress.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ViscousStress.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Thermostat.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Thermostat.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationChargeDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationChargeDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationChargeDiffusion.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationDiffusion.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronContinuity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronContinuity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronContinuity.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronMomentum.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronMomentum.cpp
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronTemperature.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronTemperature.cpp
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationMassDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationMassDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationMassDiffusion.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.h:11,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationMomentum.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/angle.cpp
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_zero.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_zero.cpp: In member function 'virtual void LAMMPS_NS::AngleZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_zero.cpp:131:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_hybrid.cpp: In member function 'virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_hybrid.cpp:337:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_hybrid.cpp:346:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_hybrid.cpp:349:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_map.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_body.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_body.cpp
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_charge.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_charge.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_charge.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom.cpp: In member function 'void LAMMPS_NS::Atom::data_atoms(int, char*, LAMMPS_NS::tagint, LAMMPS_NS::tagint, int, int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom.cpp:975:48: warning: 'iptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       imagedata = ((imageint) (atoi(values[iptr]) + IMGMAX) & IMGMASK) |
                                                ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_zero.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/change_box.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/change_box.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/change_box.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/citeme.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_hybrid.cpp:338:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_hybrid.cpp:347:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_hybrid.cpp:350:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_zero.cpp: In member function 'virtual void LAMMPS_NS::BondZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_zero.cpp:129:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm.cpp.o
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[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_brick.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_adf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_adf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_adf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_brick.cpp: In member function 'virtual void LAMMPS_NS::CommBrick::borders()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_brick.cpp:702:28: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int nsend,nrecv,sendflag,nfirst,nlast,ngroup;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_tiled.cpp: In member function 'void LAMMPS_NS::CommTiled::box_drop_brick(int, double*, double*, int&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_tiled.cpp:1496:17: warning: 'dir' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += dir;
                 ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_aggregate_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_aggregate_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_aggregate_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_tiled.cpp: In member function 'virtual void LAMMPS_NS::CommTiled::borders()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_tiled.cpp:814:9: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
         for (i = atom->nlocal; i < nlast; i++) {
         ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_adf.cpp: In member function 'virtual void LAMMPS_NS::ComputeADF::init()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_adf.cpp:309:7: warning: 'x0' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int x0;
       ^
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[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond.cpp
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp: In member function 'int LAMMPS_NS::ComputeAngleLocal::compute_angles(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp:301:25: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ptr[n] = 180.0*theta/MY_PI;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp:309:17: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ivar++;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp:247:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp:245:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->angle_atom2[atom2][i]) continue;
                                       ^
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_centro_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_centro_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_centro_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_spread_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_spread_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_spread_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp: In member function 'int LAMMPS_NS::ComputeBondLocal::compute_bonds(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:400:28: warning: 'engrot' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engrot;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:397:28: warning: 'engvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engvib;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:403:30: warning: 'engtrans' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engtrans;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:391:28: warning: 'engpot' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engpot;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:406:34: warning: 'omegasq' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = sqrt(omegasq);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:409:26: warning: 'vvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = vvib;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:413:19: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ivar++;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:281:47: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         btype = onemols[imol]->bond_type[iatom][i];
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:281:29: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         btype = onemols[imol]->bond_type[iatom][i];
                             ^
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cluster_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cluster_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cluster_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cna_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cna_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin1d()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1514:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap < boxlo[idim]) xremap += prd[idim];
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1515:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap >= boxhi[idim]) xremap -= prd[idim];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1514:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap < boxlo[idim]) xremap += prd[idim];
                              ^
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com_chunk.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin2d()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1616:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap < boxlo[jdim]) yremap += prd[jdim];
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1617:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap >= boxhi[jdim]) yremap -= prd[jdim];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1616:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap < boxlo[jdim]) yremap += prd[jdim];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin3d()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1749:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap < boxlo[kdim]) zremap += prd[kdim];
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1750:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap >= boxhi[kdim]) zremap -= prd[kdim];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1749:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap < boxlo[kdim]) zremap += prd[kdim];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp: In constructor 'LAMMPS_NS::ComputeChunkAtom::ComputeChunkAtom(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:415:29: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
         delta[idim] *= scale;
                             ^
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_contact_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_contact_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_contact_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_coord_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_coord_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_coord_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_deprecated.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_displace_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_displace_atom.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_erotate_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_erotate_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_erotate_sphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_dihedral_local.cpp: In member function 'int LAMMPS_NS::ComputeDihedralLocal::compute_dihedrals(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_dihedral_local.cpp:319:17: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ivar++;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_dihedral_local.cpp:243:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_dihedral_local.cpp:242:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->dihedral_atom2[atom2][i]) continue;
                                       ^
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_erotate_sphere_atom.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration_chunk.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_global_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeGlobalAtom::compute_peratom()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_global_atom.cpp:517:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j >= 0 && j < vmax) array_atom[i][m] = source[j];
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_global_atom.cpp:448:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j >= 0 && j < vmax) array_atom[i][m] = source[j];
                             ^
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_heat_flux.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_inertia_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_inertia_chunk.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_improper_local.cpp: In member function 'int LAMMPS_NS::ComputeImproperLocal::compute_impropers(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_improper_local.cpp:162:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_improper_local.cpp:161:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->improper_atom2[atom2][i]) continue;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_improper_local.cpp:217:17: warning: 'cbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
           cbuf[n] = 180.0*acos(c)/MY_PI;
                 ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_chunk.cpp
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_local.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_local.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_local.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_pressure.cpp: In member function 'virtual double LAMMPS_NS::ComputePressure::compute_scalar()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_pressure.cpp:257:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       scalar = (temperature->dof * boltz * t +
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_pressure.cpp: In member function 'virtual void LAMMPS_NS::ComputePressure::compute_vector()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_pressure.cpp:304:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
                               ^
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_rdf.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/create_bonds.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_box.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_box.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/create_box.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_atoms.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::add_random()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp:663:55: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp:663:31: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp:224:46: warning: 'molseed' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ranmol = new RanMars(lmp,molseed+comm->me);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp:116:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"basis") == 0) {
                        ^
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_bonds.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/deprecated.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_bonds.cpp: In member function 'void LAMMPS_NS::CreateBonds::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_bonds.cpp:129:10: warning: 'style' may be used uninitialized in this function [-Wmaybe-uninitialized]
   } else if (style == SANGLE) {
          ^
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_deprecated.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_zero.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp:322:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp:331:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp:334:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/displace_atoms.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_cfg.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_cfg.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::box_too_small_check()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp:851:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp:851:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump.cpp: In member function 'virtual void LAMMPS_NS::Dump::write()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump.cpp:514:20: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->v = vhold;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump.cpp:513:20: warning: 'xhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->x = xhold;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump.cpp:515:28: warning: 'imagehold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->image = imagehold;
                            ^
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_dcd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_dcd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_dcd.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_deprecated.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::image_check()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp:752:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp:752:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                         ^
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_local.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_local.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_local.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_movie.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_movie.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_movie.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp: In member function 'virtual int LAMMPS_NS::DumpCustom::count()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp:1031:30: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 (*ptr != 0.0 && value != 0.0))
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp:528:13: warning: 'values' may be used uninitialized in this function [-Wmaybe-uninitialized]
     double *values;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp:527:18: warning: 'ptrhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     double *ptr,*ptrhold;
                  ^
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_xyz.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_xyz.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_xyz.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/error.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/error.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/error.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp: In member function 'void LAMMPS_NS::DumpImage::create_image()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:1033:66: warning: 'color2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:1027:66: warning: 'color1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             image->draw_cylinder(x[atom1],xmid,color1,diameter,3);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:968:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:968:41: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:831:55: warning: 'color' may be used uninitialized in this function [-Wmaybe-uninitialized]
       image->draw_cylinder(pt1,pt2,color,ldiamvalue,3);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:1036:72: warning: 'diameter' may be used uninitialized in this function [-Wmaybe-uninitialized]
         } else image->draw_cylinder(x[atom1],x[atom2],color,diameter,3);
                                                                        ^
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_adapt.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_addforce.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_addforce.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_addforce.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_atom.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp: In member function 'void LAMMPS_NS::Finish::end(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp:773:33: warning: 'nneighfull' may be used uninitialized in this function [-Wmaybe-uninitialized]
     tmp = MAX(nneigh,nneighfull);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp:773:33: warning: 'nneigh' may be used uninitialized in this function [-Wmaybe-uninitialized]
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[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp:538:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_chunk.cpp: In member function 'virtual void LAMMPS_NS::FixAveChunk::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_chunk.cpp:1058:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp:854:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp:483:34: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
     values[lastindex][i] = scalar;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp: In member function 'virtual void LAMMPS_NS::FixAveHistoWeight::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp:496:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_aveforce.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_aveforce.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_aveforce.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_balance.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_balance.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_balance.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_box_relax.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_box_relax.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_box_relax.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:701:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_vector(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:912:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In member function 'int LAMMPS_NS::FixAveTime::column_length(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:972:9: warning: 'lengthone' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (lengthone != nrows)
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:630:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else vector[i] += scalar;
                             ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_controller.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_controller.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_controller.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_balance.cpp: In member function 'void LAMMPS_NS::FixBalance::rebalance()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_balance.cpp:297:67: warning: 'sendproc' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (lbstyle == BISECTION) irregular->migrate_atoms(0,1,sendproc);
                                                                   ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In constructor 'LAMMPS_NS::FixAveTime::FixAveTime(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:412:9: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (value == -1)
         ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deprecated.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_drag.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_drag.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_drag.cpp
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_dt_reset.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_dt_reset.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_enforce2d.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_enforce2d.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_enforce2d.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp: In constructor 'LAMMPS_NS::FixDeform::FixDeform(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp:183:18: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
         set[index].style = VARIABLE;
                  ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_external.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_neigh_history.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_neigh_history.cpp
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_nh.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_nh.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_nh.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_move.cpp: In member function 'virtual void LAMMPS_NS::FixMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_move.cpp:845:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_move.cpp:815:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_move.cpp:785:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
                                                             ^
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_nh_sphere.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_restrain.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_restrain.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_setforce.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_setforce.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_setforce.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_recenter.cpp: In member function 'virtual void LAMMPS_NS::FixRecenter::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_recenter.cpp:182:41: warning: 'bboxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_recenter.cpp:182:53: warning: 'bboxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]);
                                                     ^
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[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_spring_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_spring_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_spring_chunk.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_restrain.cpp: In member function 'void LAMMPS_NS::FixRestrain::restrain_dihedral(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_restrain.cpp:565:33: warning: 'ddf1' may be used uninitialized in this function [-Wmaybe-uninitialized]
   df1 = df1*cos_target[m] - ddf1*sin_target[m];
                                 ^
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_spring_rg.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_viscous.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_viscous.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_vector.cpp: In constructor 'LAMMPS_NS::FixVector::FixVector(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_vector.cpp:149:26: warning: 'finalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
     extarray = finalvalue;
                          ^
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[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj1043.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj1043.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj1043.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj126.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj126.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj126.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall.cpp: In constructor 'LAMMPS_NS::FixWall::FixWall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall.cpp:75:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_reflect.cpp: In constructor 'LAMMPS_NS::FixWallReflect::FixWallReflect(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_reflect.cpp:67:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/hashlittle.cpp.o
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[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp:738:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&ngroup,sizeof(int),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp:750:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp:754:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(names[i],sizeof(char),n,fp);
                                                     ^
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance_group.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance_group.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance_group.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp: In member function 'void LAMMPS_NS::Image::draw_cube(double*, double*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp:515:31: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
           tdir[2] = camDir[2] * t;
                               ^
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance_neigh.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_zero.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_hybrid.cpp:319:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_hybrid.cpp:328:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_hybrid.cpp:331:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/info.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/info.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/info.cpp
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/input.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/integrate.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/lmppython.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp: In function 'void MathExtra::no_squish_rotate(int, double*, double*, double*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:260:52: warning: 'kq[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:260:39: warning: 'kq[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:260:26: warning: 'kq[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:260:13: warning: 'kq[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:271:28: warning: 'kp[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[3] = c_phi*p[3] + s_phi*kp[3];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:270:28: warning: 'kp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[2] = c_phi*p[2] + s_phi*kp[2];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:269:28: warning: 'kp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[1] = c_phi*p[1] + s_phi*kp[1];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:268:28: warning: 'kp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[0] = c_phi*p[0] + s_phi*kp[0];
                            ^
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_special.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/memory.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/minimize.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/minimize.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/molecule.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/molecule.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/molecule.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1367:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1384:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1387:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(id_restart_global[i],sizeof(char),n,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1390:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1393:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(style_restart_global[i],sizeof(char),n,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1396:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1399:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(state_restart_global[i],sizeof(char),n,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1409:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nfix_restart_peratom,sizeof(int),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1426:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1429:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(id_restart_peratom[i],sizeof(char),n,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1432:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1435:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(style_restart_peratom[i],sizeof(char),n,fp);
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1438:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/nbin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/nbin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/nbin.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/nbin_standard.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/nbin_standard.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/nbin_standard.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/neigh_list.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/neigh_list.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/neigh_list.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/neigh_request.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_copy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_copy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_copy.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBin::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp:103:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp:101:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp:101:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_atomonly.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_atomonly.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_atomonly.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_stencil(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp:1673:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (newtflag) {
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_pair(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp:1781:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (newtflag) {
     ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBinGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp:109:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp:107:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp:107:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp: In member function 'virtual void LAMMPS_NS::NPairFullMulti::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp:110:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp:108:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp:108:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsq::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp:104:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp:102:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp:102:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp:88:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_atomonly_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_atomonly_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_atomonly_newton.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsqGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp:103:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp:101:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp:101:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp:107:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp:105:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp:105:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp:115:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp:113:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp:113:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp:139:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp:137:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp:137:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp:113:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp:111:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp:111:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp:147:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp:145:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp:145:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp:122:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp:120:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp:120:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp:105:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp:103:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp:103:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp:89:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp:126:39: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (includegroup && !(mask[j] & bitmask)) continue;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp:122:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp:120:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp:120:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp:90:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:173:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:131:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:129:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:129:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:151:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
               neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:20:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:71:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:219:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:177:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:175:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:175:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:152:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:20:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:70:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:219:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:220:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       numneigh_middle[i] = n_middle;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:218:29: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ilist_middle[inum] = i;
                             ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:181:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:139:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:137:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:137:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:159:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
               neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:20:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:71:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:168:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:129:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:127:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:127:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:147:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:75:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:113:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newtoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:188:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:148:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:146:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:146:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:167:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:77:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:116:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton_tri.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newtoff.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newton.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newtoff.cpp:77:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_halffull_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_halffull_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_halffull_newtoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newton.cpp:80:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_halffull_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_halffull_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_halffull_newton.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_size.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_size.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_size.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipRespa::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp:149:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp:150:36: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       numneigh_middle[i] = n_middle;
                                    ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:223:67: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (posix_memalign(&ptr, LAMMPS_MEMALIGN, pagesize*sizeof(T)))
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp:61:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_size_off2on.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:280:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:284:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&AA[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:285:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&BB[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:286:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&aa[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:287:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:288:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&beta[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:289:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:319:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:320:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp: In member function 'void LAMMPS_NS::Pair::write_file(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:1675:5: warning: 'rsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (rsq < cutsq[itype][jtype]) {
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:1686:32: warning: 'q_hold' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (atom->q) atom->q = q_hold;
                                ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp: In member function 'virtual void LAMMPS_NS::Pair::init_tables(double, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:412:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (msmflag) ftable[i] = qqrd2e/r * fgamma;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:399:30: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
         etable[i] = qqrd2e/r * egamma;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:403:30: warning: 'derfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
         etable[i] = qqrd2e/r * derfc;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:413:61: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:413:56: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
           else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
                                                        ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:332:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:336:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:337:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:338:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:339:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:340:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:341:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:372:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:373:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:374:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:375:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:363:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:367:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:368:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:369:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:371:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:372:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:404:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:405:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:406:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:407:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:408:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:165:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:161:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:162:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:166:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:161:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:362:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:366:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:367:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:368:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:369:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:371:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:403:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alf,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:404:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:405:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:406:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:407:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:486:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:487:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:481:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:482:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:481:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:484:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:485:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:479:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:480:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:479:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:168:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:165:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:169:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:310:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:314:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:315:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:316:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:317:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:346:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:347:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:348:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:349:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:366:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:371:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:372:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:373:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:374:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:405:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:406:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:407:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:408:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:409:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:467:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:467:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:146:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:146:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:247:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:250:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&cut[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:274:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:275:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:276:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDebye::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp:148:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp:149:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp:150:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp:151:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_streitz.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_streitz.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_streitz.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:255:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:279:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:280:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:281:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:282:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:251:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:275:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alf,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:276:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:277:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:278:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_deprecated.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:315:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:316:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:315:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                         ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:316:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:320:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:321:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:322:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:350:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&temperature,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:351:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:352:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:353:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:234:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:238:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:239:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:267:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_start,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:268:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_stop,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:269:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:270:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:271:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:282:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:286:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:287:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:288:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:315:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:316:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:317:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:676:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:699:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(compute_tally,sizeof(int),nstyles,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:704:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:707:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:713:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:717:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(special_lj[m],sizeof(double),4,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:720:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:724:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(special_coul[m],sizeof(double),4,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp: In member function 'virtual void LAMMPS_NS::PairHybridOverlay::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp:44:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int multflag;
       ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:608:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:612:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:613:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:614:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:643:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:644:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:645:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:646:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:399:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int multflag;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:279:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:283:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:284:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:285:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:286:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:313:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp: In member function 'virtual double LAMMPS_NS::PairLJCubic::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:345:32: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:390:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_lj*forcelj*r2inv;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:394:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:342:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:130:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:127:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:602:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:606:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:607:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:608:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:637:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:638:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:639:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:640:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:355:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:359:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:360:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:361:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:362:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:392:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:393:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:394:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:395:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:396:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:173:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:174:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:175:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:176:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:177:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDebye::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:215:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:211:71: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:211:53: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:451:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:109:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:109:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:112:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:138:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:384:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_lj*forcelj*r2inv;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:388:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:378:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:382:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:383:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:384:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:414:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:415:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:416:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:417:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:418:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:419:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:166:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:167:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:160:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:166:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:463:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:463:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:463:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:457:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:370:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:374:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:375:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:376:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:407:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alf,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:409:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:410:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:411:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:412:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:326:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:330:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:331:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:332:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shift[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:333:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:362:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:363:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:364:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:365:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:166:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:159:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp: In member function 'void LAMMPS_NS::LAMMPS::init_pkg_lists()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp:901:13: note: variable tracking size limit exceeded with -fvar-tracking-assignments, retrying without
 void _noopt LAMMPS::init_pkg_lists()
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:341:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:345:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:346:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:347:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:348:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:378:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:379:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:380:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:381:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:435:65: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:137:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:380:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:384:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:385:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:414:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:415:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:416:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_inner,sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:417:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:418:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:419:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:354:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:358:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:359:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:360:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:361:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:391:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:392:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:393:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:394:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacsCoulGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:501:51: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:497:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:490:38: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tc*tc*tc * (coulsw3 + coulsw4*tc);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp: In member function 'virtual double LAMMPS_NS::PairLJSmooth::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:452:30: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:451:60: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 -
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:447:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]) -
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:157:58: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoulswitch = tc*tc*tc * (coulsw3 + coulsw4*tc);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:167:59: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:163:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:163:46: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:142:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:141:68: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 -
                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:137:27: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
                           ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:285:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:289:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:290:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:291:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:318:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:319:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:629:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:633:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:634:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:635:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamR[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:636:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamA[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:637:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:668:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:669:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:670:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:671:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:267:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:271:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:272:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:273:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:274:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:302:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:303:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:304:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp:901:13: note: variable tracking size limit exceeded
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:392:46: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_mie*forcemie*r2inv;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:396:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:247:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:251:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&prefactor[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:252:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:277:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:278:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:979:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:980:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:981:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewaldflag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:982:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&pppmflag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:983:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&msmflag,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:984:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&dispersionflag,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:985:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tip4pflag,sizeof(int),1,fp);
                                       ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp: In constructor 'LAMMPS_NS::LAMMPS::LAMMPS(int, char**, MPI_Comm)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp:639:5: warning: 'wlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
     for (iarg = wfirst; iarg < wlast; iarg++)
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp:165:7: warning: 'wfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int wfirst,wlast;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp: In member function 'virtual double LAMMPS_NS::PairTable::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:1044:41: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:1044:14: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:1041:35: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phi = tb->e[itable] + fraction*tb->de[itable];
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:281:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:285:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:286:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:287:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:315:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:316:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:317:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:178:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:178:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:175:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:255:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:259:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:260:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:287:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:288:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:289:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:290:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/random_mars.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/random_mars.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/random_mars.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp:173:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp:177:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp:202:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp:203:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&coeffflag,sizeof(int),1,fp);
                                       ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/random_park.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/random_park.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/random_park.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp: In member function 'virtual void LAMMPS_NS::PairZBL::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp:131:53: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp: In member function 'virtual double LAMMPS_NS::PairZBL::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp:279:45: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                             ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_data.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_data.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/read_data.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp: In member function 'void LAMMPS_NS::ProcMap::output(char*, int*, int***)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp:693:16: warning: 'kme' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[5] = kme + 1;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp:692:16: warning: 'jme' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[4] = jme + 1;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp:691:16: warning: 'ime' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[3] = ime + 1;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp: In member function 'int LAMMPS_NS::ProcMap::best_factors(int, int**, int*, int, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp:887:10: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return index;
          ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp:576:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
                                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp:504:29: warning: 'valuehalf_select' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else lo[dim] = valuehalf;
                             ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute_old(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp:1068:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
                                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::seek(LAMMPS_NS::bigint, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp:283:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized]
   bigint ntimestep;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::next(LAMMPS_NS::bigint, LAMMPS_NS::bigint, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp:423:5: warning: 'eofflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (eofflag) ntimestep = -1;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp:378:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized]
   bigint ntimestep;
          ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/reader.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/reader.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/reader.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:305:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&flag,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:309:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&procsperfile,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:312:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:316:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&n,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:322:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(buf,sizeof(double),n,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:382:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&flag,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:385:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&procsperfile,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:394:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:398:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&n,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:404:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(buf,sizeof(double),n,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_layout()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:1104:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(all_written_send_sizes,sizeof(int),nprocs_file,fp);
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'char* LAMMPS_NS::ReadRestart::read_string()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:1286:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(value,sizeof(char),n,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_int_vec(int, int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:1298:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(vec,sizeof(int),n,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_double_vec(int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:1309:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(vec,sizeof(double),n,fp);
                                              ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/reader_native.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/reader_native.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/reader_native.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/reader_xyz.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/reader_xyz.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/reader_xyz.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cone.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cone.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cone.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region.cpp: In member function 'int LAMMPS_NS::Region::surface(double, double, double, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region.cpp:190:34: warning: 'xorig[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].delz = xorig[2] - zs;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region.cpp:189:34: warning: 'xorig[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].dely = xorig[1] - ys;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region.cpp:188:34: warning: 'xorig[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].delx = xorig[0] - xs;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp: In member function 'virtual int LAMMPS_NS::RegBlock::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp:334:28: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
   add_contact(0,x,xp,yp,zp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp:334:28: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp:334:28: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_deprecated.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_intersect.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_intersect.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_intersect.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_plane.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_plane.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_plane.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp: In member function 'virtual int LAMMPS_NS::RegCylinder::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp:716:30: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     add_contact(0,x,xp,yp,zp);
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp:716:30: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp:716:30: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_prism.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/run.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/run.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/set.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/set.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/set.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/special.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/special.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/special.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/run.cpp: In member function 'void LAMMPS_NS::Run::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/run.cpp:172:41: warning: 'stop' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (stopflag) update->endstep = stop;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/run.cpp:170:45: warning: 'start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (startflag) update->beginstep = start;
                                             ^
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/thermo.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/thermo.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/thermo.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/timer.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/timer.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/timer.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/set.cpp: In member function 'void LAMMPS_NS::Set::setrandom(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/set.cpp:1150:24: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized]
           quat[1] = 0.0;
                        ^
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/universe.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/update.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/update.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/update.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/utils.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/utils.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/utils.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/universe.cpp: In member function 'void LAMMPS_NS::Universe::reorder(char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/universe.cpp:148:38: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
   MPI_Comm_split(uorig,0,key,&uworld);
                                      ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::next(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:685:33: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
       fscanf(fp,"%d",&nextindex);
                                 ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/verlet.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/verlet.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/verlet.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_coeff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_coeff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/write_coeff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp: In member function 'void LAMMPS_NS::Velocity::set(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:544:63: warning: 'zvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(zvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:539:63: warning: 'yvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(yvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:534:63: warning: 'xvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(xvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:457:17: warning: 'vz' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vz *= zscale;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:453:17: warning: 'vy' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vy *= yscale;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:449:17: warning: 'vx' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vx *= xscale;
                 ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_data.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_data.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/write_data.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:30:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/memory.h: In member function 'void LAMMPS_NS::Velocity::create(double, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/memory.h:171:5: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     sfree(array[0]);
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:165:12: note: 'vhold' was declared here
   double **vhold;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::group_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:3994:39: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
   } else argstack[nargstack++] = value;
                                       ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_dump.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/write_dump.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_restart.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/write_restart.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate_boolean(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:4764:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int op,opprevious,flag1,flag2;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:4068:20: warning: 'nstride' may be used uninitialized in this function [-Wmaybe-uninitialized]
     int index,nvec,nstride;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:4211:7: warning: 'nvec' may be used uninitialized in this function [-Wmaybe-uninitialized]
       for (int i = 0; i < nvec; i++) {
       ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_temp_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_temp_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_temp_asphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate(char*, LAMMPS_NS::Variable::Tree**, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:1186:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int op,opprevious;
       ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nh_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nh_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nh_asphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp: In member function 'virtual double LAMMPS_NS::ComputeERotateAsphere::compute_scalar()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp:138:35: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertia[0] = tbonus[tri[i]].inertia[0];
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp:129:32: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         length = lbonus[line[i]].length;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp:108:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nph_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nph_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nph_asphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'void LAMMPS_NS::Variable::compute_atom(int, int, double*, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:964:11: warning: 'vstore' may be used uninitialized in this function [-Wmaybe-uninitialized]
   double *vstore;
           ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_npt_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_npt_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_npt_asphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::math_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:3746:37: warning: 'value2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       double value = value1 + value2*(1.0-cos(omega*delta*update->dt));
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:3412:42: warning: 'value1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       argstack[nargstack++] = sqrt(value1);
                                          ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nve_asphere.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nve_asphere_noforce.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nvt_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nvt_asphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nve_asphere_noforce.cpp: In member function 'virtual void LAMMPS_NS::FixNVEAsphereNoforce::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nve_asphere_noforce.cpp:88:33: warning: 'bonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = bonus[ellipsoid[i]].shape;
                                 ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_line_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_line_lj.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:463:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:466:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:470:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:474:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:475:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:476:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:508:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gamma,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:509:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&upsilon,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:510:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:511:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:512:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:513:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:441:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:444:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:448:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:452:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:453:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:454:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:482:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:483:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_line_lj.cpp: In member function 'virtual void LAMMPS_NS::PairLineLJ::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_line_lj.cpp:304:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp: In member function 'double LAMMPS_NS::PairGayBerne::gayberne_analytic(int, int, double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double*, double, double*, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:726:36: warning: 'deta2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:725:36: warning: 'deta2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:724:36: warning: 'deta2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:726:21: warning: 'dchi2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:725:21: warning: 'dchi2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:724:21: warning: 'dchi2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:726:51: warning: '*((void*)& dUr2 +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:725:51: warning: '*((void*)& dUr2 +8)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:724:51: warning: 'dUr2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                                                   ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_nparticle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_nparticle.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp: In member function 'virtual void LAMMPS_NS::PairTriLJ::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp:378:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:216:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polygon.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polygon.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:191:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_body_local.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_body_local.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_body_local.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_temp_body.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_temp_body.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_temp_body.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::BodyRoundedPolyhedron::data_body(int, int, int, int*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp:216:7: warning: 'nedges' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int nedges,nentries;
       ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_nh_body.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_nh_body.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_nh_body.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_nph_body.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_nparticle.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polygon.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolygon::post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polygon.cpp:337:60: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
                           contact_list, num_contacts, facc);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polygon.cpp:299:9: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (delr > eradi) dz = cylradius;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:244:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable]
       int interact, num_contacts, done;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:14: warning: variable 'rsqinv' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:33: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:39: warning: variable 'eradj' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:45: warning: variable 'rradi' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:51: warning: variable 'rradj' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolygon::sphere_against_sphere(int, int, double, double, double, double, double, double, double**, double**, double**, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:601:10: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
   double eradi,eradj,rradi,rradj;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:601:16: warning: variable 'eradj' set but not used [-Wunused-but-set-variable]
   double eradi,eradj,rradi,rradj;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:603:32: warning: variable 'fn' set but not used [-Wunused-but-set-variable]
   double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:603:38: warning: variable 'ft' set but not used [-Wunused-but-set-variable]
   double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolygon::vertex_against_edge(int, int, double, double, double**, double**, double**, LAMMPS_NS::tagint*, LAMMPS_NS::PairBodyRoundedPolygon::Contact*, int&, double&, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:706:24: warning: variable 'nei' set but not used [-Wunused-but-set-variable]
   int ni, npi, ifirst, nei, iefirst;
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:706:29: warning: variable 'iefirst' set but not used [-Wunused-but-set-variable]
   int ni, npi, ifirst, nei, iefirst;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:707:11: warning: variable 'npj' set but not used [-Wunused-but-set-variable]
   int nj, npj, jfirst, nej, jefirst;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:708:32: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
   double xpi[3], xpj[3], dist, eradi, eradj, rradi, rradj;
                                ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolyhedron::post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polyhedron.cpp:357:58: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         contact_list, num_contacts, facc);
                                                          ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_nparticle.cpp: In member function 'virtual void LAMMPS_NS::PairBodyNparticle::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_nparticle.cpp:325:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:274:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable]
       int interact, num_contacts;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolyhedron::sanity_check()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:2344:22: warning: variable 'x3' set but not used [-Wunused-but-set-variable]
   double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:2344:28: warning: variable 'x4' set but not used [-Wunused-but-set-variable]
   double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:106:15: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int nei,nej,iefirst,jefirst;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:106:7: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int nei,nej,iefirst,jefirst;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:105:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:105:13: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:375:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:376:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:377:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:378:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:380:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_k[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:381:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:382:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:384:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:385:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:386:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:387:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp: In member function 'virtual void LAMMPS_NS::BondClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp:185:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp:186:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp:187:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp:188:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp: In member function 'virtual void LAMMPS_NS::DihedralClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:838:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:839:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:840:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:841:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:842:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:843:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:845:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:846:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:847:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:848:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_r0[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:850:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:851:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:852:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:853:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_r0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:855:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:856:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:857:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:858:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_r0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:860:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:861:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:862:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:863:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:865:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:866:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:867:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:868:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:870:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:871:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:872:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:874:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:875:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_r10[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:876:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_r30[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp: In member function 'virtual void LAMMPS_NS::ImproperClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:607:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:608:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi0[1],sizeof(double),atom->nimpropertypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:610:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k1[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:611:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k2[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:612:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k3[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:613:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_1[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:614:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_2[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:615:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_3[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:613:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:617:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:618:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:619:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:648:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:649:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:650:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:651:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:218:21: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (r > eradi + eradj + cut_inner) continue;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:121:43: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:121:35: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:121:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:121:13: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp: In member function 'void LAMMPS_NS::ImproperClass2::angleangle(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:823:58: warning: 'eimproper' may be used uninitialized in this function [-Wmaybe-uninitialized]
                delxBD-delxBC,delyBD-delyBC,delzBD-delzBC);
                                                          ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:393:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_lj*forcelj*r2inv;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:397:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/fix_wall_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/fix_wall_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/fix_wall_colloid.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:369:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:370:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:371:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:372:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:402:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:403:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:404:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:405:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:406:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:463:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:463:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:143:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:143:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:808:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:812:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:813:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:814:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:845:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:846:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:847:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:848:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:849:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:850:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:851:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:605:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:609:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:610:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:645:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:646:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:647:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagfld,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:648:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:649:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:650:42: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_target, sizeof(double),1,fp);
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:651:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed, sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:652:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:653:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:654:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:655:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:940:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:940:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:933:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:933:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:936:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:931:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:539:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:513:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:539:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:539:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:545:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:542:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:179:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:184:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:187:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:187:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:181:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:181:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:304:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_pu);
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:236:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_sh);
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:397:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (comm->me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:401:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a12[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:402:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:403:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d1[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:404:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:405:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:435:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:436:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:437:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp: In member function 'virtual void LAMMPS_NS::PairBrownianPoly::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp:290:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_pu);
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp:239:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_sh);
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual double LAMMPS_NS::PairColloid::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:540:20: warning: 'phi' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return factor_lj*phi;
                    ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:191:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       f[i][2] += delz*fpair;
                      ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU_poly.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:685:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:689:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:690:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:723:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:724:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:725:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagfld,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:726:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:727:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:728:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:729:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:730:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:731:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1911:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1915:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1916:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1948:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1949:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1950:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1951:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1952:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1953:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1954:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1955:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate_poly.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_yukawa_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_yukawa_colloid.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/compute_temp_cs.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSFCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:141:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:137:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:138:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:142:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:137:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:178:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:170:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:175:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:179:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:172:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:172:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolfCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:141:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:138:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:142:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_wolf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_wolf_cs.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:176:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:168:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:173:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:176:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:170:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:170:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/atom_vec_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/atom_vec_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/atom_vec_dipole.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp:157:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp:162:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp:159:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp:159:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:526:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:502:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:526:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:526:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:532:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:529:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:169:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:174:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:178:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:171:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:171:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:440:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:444:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:445:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:446:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:447:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:476:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:477:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:478:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:479:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:493:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:497:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:498:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:499:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:527:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:528:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:529:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:530:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:239:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:237:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:235:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:235:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:239:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:244:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:70: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:54: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:47: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:31: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:70: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:54: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:300:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:347:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:351:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_read[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:352:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_read[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:353:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:382:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:383:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:384:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:385:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:386:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_freeze.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_freeze.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_freeze.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran_region.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran_region.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran_region.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hertz_history.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hertz_history.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hertz_history.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp: In member function 'virtual void LAMMPS_NS::FixPour::pre_exchange()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp:679:42: warning: 'natom' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ninserted_mols = ninserted_atoms / natom;
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp:695:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
       atom->nbonds += onemols[imol]->nbonds * ninserted_mols;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp:653:65: warning: 'denstmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
           atom->rmass[n] = 4.0*MY_PI/3.0 * radtmp*radtmp*radtmp * denstmp;
                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp:502:30: warning: 'radtmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
         coords[0][3] = radtmp;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp: In member function 'void LAMMPS_NS::FixWallGran::granular(double, double, double, double, double*, double, double*, double*, double*, double*, double, double, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1363:49: warning: 'relrot3' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1363:36: warning: 'relrot2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1363:23: warning: 'relrot1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1172:55: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
   damp_normal_prefactor = normal_coeffs[1]*damp_normal;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1203:23: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
     F_pulloff = 4*M_PI*coh*Reff;
                       ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:543:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:569:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kn,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:570:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kt,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:571:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gamman,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:572:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gammat,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:573:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&xmu,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:574:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&dampflag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1253:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1257:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&normal_model[i][j],sizeof(int),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1258:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&damping_model[i][j],sizeof(int),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1259:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&tangential_model[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1260:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&roll_model[i][j],sizeof(int),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1261:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&twist_model[i][j],sizeof(int),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1262:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(normal_coeffs[i][j],sizeof(double),4,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1263:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(tangential_coeffs[i][j],sizeof(double),3,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1264:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(roll_coeffs[i][j],sizeof(double),3,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1265:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(twist_coeffs[i][j],sizeof(double),3,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1266:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cutoff_type[i][j],sizeof(double),1,fp);
                                                        ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual double LAMMPS_NS::PairGranular::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1644:27: warning: 'magtortwist' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[8] = magtortwist;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1642:19: warning: 'fr3' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[6] = fr3;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1641:19: warning: 'fr2' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[5] = fr2;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1640:19: warning: 'fr1' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[4] = fr1;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1643:18: warning: 'fr' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[7] = fr;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1615:49: warning: 'relrot3' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1615:36: warning: 'relrot2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1615:23: warning: 'relrot1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1626:55: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtortwist = -k_twist*history[twist_history_index] - damp_twist*magtwist;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1461:69: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
   damp_normal_prefactor = normal_coeffs[itype][jtype][1]*damp_normal;
                                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1436:40: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
     sqrt3 = MAX(0, 4*dR - t5 + SIXROOT6*coh*MY_PI*R2/(E*t6));
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1436:50: warning: 'R2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     sqrt3 = MAX(0, 4*dR - t5 + SIXROOT6*coh*MY_PI*R2/(E*t6));
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:382:49: warning: 'allhistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
           history = &allhistory[size_history*jj];
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:452:71: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
             shrmag = sqrt(history[0]*history[0] + history[1]*history[1] +
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:168:8: warning: 'touch' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *touch,**firsttouch;
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:389:30: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
           F_pulloff = 4*MY_PI*coh*Reff;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:353:75: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
         damp_normal_prefactor = normal_coeffs[itype][jtype][1]*damp_normal;
                                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:226:34: warning: 'firsthistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
       allhistory = firsthistory[i];
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:225:27: warning: 'firsttouch' may be used uninitialized in this function [-Wmaybe-uninitialized]
       touch = firsttouch[i];
                           ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp: In member function 'virtual void LAMMPS_NS::EwaldDipole::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp:506:16: warning: unused variable 'vk' [-Wunused-variable]
     double uk, vk;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp:413:18: warning: unused variable 'partial2' [-Wunused-variable]
   double partial,partial2,partial_peratom;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp: In member function 'void LAMMPS_NS::EwaldDipole::slabcorr()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp:780:12: warning: unused variable 'x' [-Wunused-variable]
   double **x = atom->x;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp:781:10: warning: unused variable 'zprd' [-Wunused-variable]
   double zprd = domain->zprd;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp: In member function 'virtual void LAMMPS_NS::EwaldDipoleSpin::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:485:16: warning: unused variable 'vk' [-Wunused-variable]
     double uk, vk;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp: In member function 'void LAMMPS_NS::EwaldDipoleSpin::slabcorr()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:766:12: warning: unused variable 'x' [-Wunused-variable]
   double **x = atom->x;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:767:10: warning: unused variable 'zprd' [-Wunused-variable]
   double zprd = domain->zprd;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:772:10: warning: unused variable 'spx' [-Wunused-variable]
   double spx,spy,spz;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:772:14: warning: unused variable 'spy' [-Wunused-variable]
   double spx,spy,spz;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:920:79: warning: 'normal_coeffs_one[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         normal_coeffs[i][j][0] = normal_coeffs[j][i][0] = normal_coeffs_one[0];
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:912:61: warning: 'normal_coeffs_one[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       normal_coeffs[i][j][1] = normal_coeffs[j][i][1] = damp;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:918:60: warning: 'normal_coeffs_one[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                     poiss[i][j],poiss[i][j]);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:923:79: warning: 'normal_coeffs_one[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         normal_coeffs[i][j][3] = normal_coeffs[j][i][3] = normal_coeffs_one[3];
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual double LAMMPS_NS::PairGranular::init_one(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1213:10: warning: 'cutoff' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return cutoff;
          ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_disp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_disp.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d_wrap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d_wrap.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp: In member function 'virtual void LAMMPS_NS::EwaldDipoleSpin::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:430:27: warning: 'partial2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       tk[i][0] += partial2*eg[k][0];
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp: In function 'void fft_3d(double (*)[2], double (*)[2], int, fft_plan_3d*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp:69:9: warning: variable 'total' set but not used [-Wunused-but-set-variable]
   int i,total,length,offset,num;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp:69:15: warning: variable 'length' set but not used [-Wunused-but-set-variable]
   int i,total,length,offset,num;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp:69:22: warning: unused variable 'offset' [-Wunused-variable]
   int i,total,length,offset,num;
                      ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fix_tune_kspace.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm_cg.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:424:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:428:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:429:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:430:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:431:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:432:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:433:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:467:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:468:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:469:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:470:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:471:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:472:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:473:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:565:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:566:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:558:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:558:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:561:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:556:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:188:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:180:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:185:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:189:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:182:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:182:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:402:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:406:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:407:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:409:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:441:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:442:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:443:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:444:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:445:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:446:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:447:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:182:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:179:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:178:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:183:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:537:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:537:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:530:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:530:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:533:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:528:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:182:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:174:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:179:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:182:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:176:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:176:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:241:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:242:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:237:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:236:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp: In member function 'virtual void LAMMPS_NS::MSM::direct(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1640:47: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v5sum += v5_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1639:47: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v4sum += v4_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1638:47: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v3sum += v3_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1637:47: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v2sum += v2_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1636:47: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v1sum += v1_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1635:47: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v0sum += v0_directn[k] * qtmp2;
                                               ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:178:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:175:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:174:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:178:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp: In member function 'void LAMMPS_NS::MSM::direct_top(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1995:50: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v5sum += v5_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1994:50: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v4sum += v4_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1993:50: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v3sum += v3_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1992:50: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v2sum += v2_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1991:50: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v1sum += v1_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1990:50: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v0sum += v0_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:236:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:236:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:232:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:231:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:358:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:362:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_a_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:363:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_rho_read[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:364:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_c_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_buck_read[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:397:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_buck_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:398:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:399:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:400:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:401:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:402:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:403:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:292:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:295:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&scale[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:321:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:322:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:323:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:324:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:325:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:372:29: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:374:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:374:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:372:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:156:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:161:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:158:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:158:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:143:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:138:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:140:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:140:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:198:31: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:200:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:200:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:198:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:825:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:829:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:830:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:831:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:832:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:864:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:865:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:866:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:867:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:868:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:869:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:870:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:377:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:405:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * fgamma;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:377:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:411:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:408:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:969:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:961:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:961:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:964:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:959:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:514:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:506:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:506:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:509:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:504:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*egamma;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:892:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:896:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:897:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:898:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:899:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:931:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:932:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:933:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:934:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:935:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:936:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:937:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:208:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:203:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:205:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:205:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:544:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:516:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:544:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:544:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:550:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:547:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:193:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:198:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:202:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:195:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:195:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:202:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1045:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       philj6 = -lj4[itype][jtype]*r6inv +
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1040:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1028:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1028:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1031:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1026:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:604:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:567:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:604:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:604:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:610:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:607:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:796:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:800:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:801:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:802:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:833:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:834:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:835:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:836:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:837:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:838:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:839:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:214:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:219:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:235:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl6 = -lj4[itype][jtype]*r6inv +
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:216:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:216:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:233:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl12 = r6inv*lj3[itype][jtype]*r6inv -
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:930:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:922:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:922:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:925:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:920:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:531:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:532:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:533:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:534:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:535:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:537:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:538:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:539:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:540:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:541:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:542:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:543:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:354:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:378:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * fgamma;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:354:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:384:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:381:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:533:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:509:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:533:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:533:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:539:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:536:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:180:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:185:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:189:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:182:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:182:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:464:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:456:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:456:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:459:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:454:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*egamma;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:409:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:414:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:411:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:404:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:403:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:331:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:327:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:411:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:198:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:193:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:202:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:195:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:195:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:358:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:362:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_read[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:363:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_read[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:364:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:395:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:396:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:397:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:398:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:399:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:400:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:401:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:470:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:471:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:472:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:473:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:474:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1542:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1543:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1544:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1545:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1546:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1548:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1549:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1550:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1551:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1552:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1553:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:377:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:382:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:379:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:372:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:371:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:299:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:295:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:379:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_middle()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:974:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:970:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:943:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:939:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_cg.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_cg.cpp
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:445:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:450:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:447:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:440:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:439:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:367:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:363:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:447:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_inner()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:713:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:709:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:682:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:678:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h: In constructor 'LAMMPS_NS::PPPMDipole::PPPMDipole(LAMMPS_NS::LAMMPS*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:63:55: warning: 'LAMMPS_NS::PPPMDipole::uz_brick_dipole' will be initialized after [-Wreorder]
   FFT_SCALAR ***ux_brick_dipole,***uy_brick_dipole,***uz_brick_dipole;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:61:17: warning:   'FFT_SCALAR*** LAMMPS_NS::PPPMDipole::vdxx_brick_dipole' [-Wreorder]
   FFT_SCALAR ***vdxx_brick_dipole,***vdyy_brick_dipole,***vdzz_brick_dipole;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:60:1: warning:   when initialized here [-Wreorder]
 PPPMDipole::PPPMDipole(LAMMPS *lmp) : PPPM(lmp),
 ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:62:17: warning: 'LAMMPS_NS::PPPMDipole::vdxy_brick_dipole' will be initialized after [-Wreorder]
   FFT_SCALAR ***vdxy_brick_dipole,***vdxz_brick_dipole,***vdyz_brick_dipole;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:61:38: warning:   'FFT_SCALAR*** LAMMPS_NS::PPPMDipole::vdyy_brick_dipole' [-Wreorder]
   FFT_SCALAR ***vdxx_brick_dipole,***vdyy_brick_dipole,***vdzz_brick_dipole;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:60:1: warning:   when initialized here [-Wreorder]
 PPPMDipole::PPPMDipole(LAMMPS *lmp) : PPPM(lmp),
 ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:62:59: warning: 'LAMMPS_NS::PPPMDipole::vdyz_brick_dipole' will be initialized after [-Wreorder]
   FFT_SCALAR ***vdxy_brick_dipole,***vdxz_brick_dipole,***vdyz_brick_dipole;
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:61:59: warning:   'FFT_SCALAR*** LAMMPS_NS::PPPMDipole::vdzz_brick_dipole' [-Wreorder]
   FFT_SCALAR ***vdxx_brick_dipole,***vdyy_brick_dipole,***vdzz_brick_dipole;
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:60:1: warning:   when initialized here [-Wreorder]
 PPPMDipole::PPPMDipole(LAMMPS *lmp) : PPPM(lmp),
 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp: In member function 'virtual void LAMMPS_NS::PPPMDipole::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:537:13: warning: unused variable 'q' [-Wunused-variable]
     double *q = atom->q;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:540:9: warning: unused variable 'ntotal' [-Wunused-variable]
     int ntotal = nlocal;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp: In member function 'double LAMMPS_NS::PPPMDipole::compute_qopt_dipole()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:929:10: warning: variable 'cnx' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:929:14: warning: variable 'cny' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:929:18: warning: variable 'cnz' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:932:10: warning: variable 'numerator' set but not used [-Wunused-but-set-variable]
   double numerator,denominator;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:933:13: warning: unused variable 'u2' [-Wunused-variable]
   double u1,u2,u3,sqk;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:933:16: warning: unused variable 'u3' [-Wunused-variable]
   double u1,u2,u3,sqk;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp: In member function 'void LAMMPS_NS::PPPMDipole::compute_gf_dipole()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:1024:10: warning: variable 'cnx' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:1024:14: warning: variable 'cny' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:1024:18: warning: variable 'cnz' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:1027:10: warning: variable 'numerator' set but not used [-Wunused-but-set-variable]
   double numerator,denominator;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp: In member function 'virtual void LAMMPS_NS::PPPMDipole::slabcorr()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:2392:12: warning: unused variable 'x' [-Wunused-variable]
   double **x = atom->x;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:2393:10: warning: unused variable 'zprd' [-Wunused-variable]
   double zprd = domain->zprd;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1415:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1414:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1316:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1312:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_disp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_disp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp: In member function 'virtual void LAMMPS_NS::PPPMDipoleSpin::slabcorr()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp:666:12: warning: unused variable 'x' [-Wunused-variable]
   double **x = atom->x;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp:667:10: warning: unused variable 'zprd' [-Wunused-variable]
   double zprd = domain->zprd;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp:672:10: warning: unused variable 'spx' [-Wunused-variable]
   double spx,spy,spz;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp:672:14: warning: unused variable 'spy' [-Wunused-variable]
   double spx,spy,spz;
              ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_disp_tip4p.cpp.o
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[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_stagger.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/fix_qeq_comb.cpp: In member function 'virtual void LAMMPS_NS::FixQEQComb::post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/fix_qeq_comb.cpp:163:32: warning: 'ilist' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,ii,iloop,loopmax,inum,*ilist;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/fix_qeq_comb.cpp:163:26: warning: 'inum' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,ii,iloop,loopmax,inum,*ilist;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:3394:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:3395:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo_morse.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_adp.cpp:629:66: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fp,filename,file->nr,&file->z2r[i][j][1]);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp: In member function 'virtual void LAMMPS_NS::PairATM::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp:313:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp:316:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&nu[i][j][k],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp: In member function 'virtual void LAMMPS_NS::PairATM::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp:341:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp:342:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_triple,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::TORSION(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:1236:64: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ev_tally4(i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl);
                                                                ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp: In member function 'void LAMMPS_NS::PairBOP::read_table(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:4979:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);  // skip first comment line
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:4980:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:4985:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5014:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5082:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);  // skip first comment line
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5084:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5086:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5090:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5095:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5099:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5101:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5103:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5112:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5119:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5123:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5127:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5129:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5133:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5135:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5139:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5141:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5145:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5147:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5151:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5153:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5157:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5159:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5161:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5170:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5177:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5185:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5193:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5201:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5208:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5212:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5229:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Spbicubic(double, double, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:4171:49: warning: 'yn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (j > 0) df[1] += c * ((double) j) * xn * yn1;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Sptricubic(double, double, double, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:4211:46: warning: 'zn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (k > 0) df[2] += c * kr * xn * yn * zn1;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5220:5: warning: 'nws' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(nws==3) {
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:4965:13: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,j,k,n,m;
             ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::read_lib()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:326:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:327:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:338:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:350:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:358:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:366:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:375:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLIB,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:384:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:391:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLIB,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:404:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:422:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:431:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
              fgets(s,MAXLIB,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:446:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:464:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:473:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(s,MAXLIB,fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:488:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:506:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:515:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(s,MAXLIB,fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::FLJ(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:806:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair = dC*dwij / rij;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:850:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:845:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:845:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:850:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:821:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:817:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkjS / rikS;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:840:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:845:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:850:45: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:845:45: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:821:40: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:840:45: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:876:76: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
             v_tally4(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS);
                                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:876:76: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::comb_zetaterm_d(double, double, double, double, double, double*, double, double*, double, double*, double*, double*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:2309:44: warning: 'com6' may be used uninitialized in this function [-Wmaybe-uninitialized]
             {com6+=prefac_ij2*pcrossk*dfc_k;}
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp: In member function 'double LAMMPS_NS::PairBOP::sigmaBo(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1758:42: warning: 'dis_jk[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1758:62: warning: 'dis_jk[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1759:35: warning: 'dis_jk[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         +dis_ik[2]*dis_jk[2])/(r_ik*r_jk);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1770:51: warning: 'r_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     dcA_ikj[2][1]=(-dis_ik[2]*r_ik*r_jk-cosAng_ikj
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1495:38: warning: 'temp_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
             bt_sg[nb_jk].temp=temp_jk;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:3636:30: warning: 'temp_ji' may be used uninitialized in this function [-Wmaybe-uninitialized]
               else if(temp_kk==temp_ji&&setting==0) {
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::force_zeta(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double, double, double, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, int, double&, double, double, int, int, int, double, double, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:1794:48: warning: 'prady' may be used uninitialized in this function [-Wmaybe-uninitialized]
      prady  += 1.0 *  btor[2] * bbtor * att_eng;
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:1793:48: warning: 'pradx' may be used uninitialized in this function [-Wmaybe-uninitialized]
      pradx  += 1.0 *  btor[1] * bbtor * att_eng;
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::direct(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, int, int, int, double, double, double, double, double, double, double, double, double&, double&, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:2799:20: warning: 'dcurlji' may be used uninitialized in this function [-Wmaybe-uninitialized]
    smf1n += dcurlji*iq*(afbn-fafbnl)*esucon/r;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:2802:20: warning: 'dcurlij' may be used uninitialized in this function [-Wmaybe-uninitialized]
    smf1j += dcurlij*jq*(afbj-fafbnl)*esucon/r;
                    ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp: In member function 'virtual void LAMMPS_NS::PairEAM::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp:469:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp:470:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp:472:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp: In member function 'void LAMMPS_NS::PairEAM::grab(FILE*, int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp:787:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloy::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:191:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:204:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFS::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:193:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp: In member function 'virtual void LAMMPS_NS::PairEAMCD::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp:386:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair += D_i * rhojp * t1;
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp: In member function 'int LAMMPS_NS::PairEIM::grabpair(FILE*, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp:969:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(line,MAXLINE,fptr);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp:973:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(line,MAXLINE,fptr);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:209:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw_zbl.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp: In member function 'void LAMMPS_NS::PairLCBOP::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:981:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:987:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:988:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:989:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&gamma_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:990:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&A);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:991:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:992:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:993:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&alpha);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:994:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:995:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:996:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&d);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:997:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:998:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_4);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:999:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_6);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1000:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&L);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1001:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&kappa);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1002:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_0);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1003:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1004:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_0);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1005:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1_LR);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1006:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2_LR);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1007:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1008:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1009:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1010:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1011:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&lambda_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1012:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&lambda_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1013:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1014:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&delta);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1017:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1026:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(s,MAXLINE,fp);
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1033:40: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         while (1) { fgets(s,MAXLINE,fp); if (s[0] != '#') break; }
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1040:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1046:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_nb3b_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_nb3b_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_nb3b_harmonic.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_rebo.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_rebo.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_rebo.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:576:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:577:60: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     while (line == strchr(line,'#')) fgets(line,MAXLINE,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:593:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:611:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:647:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'void LAMMPS_NS::PairPolymorphic::grab(FILE*, int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:878:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_sw.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_sw.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff_mod.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:259:7: warning: 'emb' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (emb > epsilon) {
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:287:82: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally(i,i,nlocal,newton_pair,evdwl,0.0,0.0,delx,dely,delz);
                                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:287:82: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:287:82: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff_mod_c.cpp.o
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[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_atom_swap.cpp: In member function 'int LAMMPS_NS::FixAtomSwap::attempt_semi_grand()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_atom_swap.cpp:384:54: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
         atom->v[i][0] *= sqrt_mass_ratio[itype][jtype];
                                                      ^
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_tfmc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_tfmc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_tfmc.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp: In member function 'virtual void LAMMPS_NS::FixBondSwap::post_integrate()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:628:44: warning: 'jlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jangle = 0; jangle < num_angle[jlast]; jangle++) {
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:606:44: warning: 'jprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jangle = 0; jangle < num_angle[jprev]; jangle++) {
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:201:25: warning: 'jnext' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:617:44: warning: 'ilast' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (iangle = 0; iangle < num_angle[ilast]; iangle++) {
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:490:39: warning: 'iprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (iprev >= 0) iprevtag = tag[iprev];
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:201:7: warning: 'inext' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:413:53: warning: 'jnextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(jnextangletype,i,jnext,jlast) +
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:418:49: warning: 'jangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(jangletype,jprev,j,jnext) -
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:417:53: warning: 'inextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(inextangletype,i,inext,ilast) -
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:412:56: warning: 'iangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             delta += angle_eng(iangletype,iprev,i,jnext) +
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:456:37: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jbond = 0; jbond < num_bond[j]; jbond++)
                                     ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/fix_client_md.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/fix_client_md.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/fix_client_md.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:348:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:352:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:353:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:381:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:382:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&max_cell_size,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:383:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:384:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:385:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp: In member function 'double LAMMPS_NS::FixGCMC::energy_full()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp:2293:11: warning: 'imolecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (imolecule == molecule[j]) continue;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp: In member function 'void LAMMPS_NS::Message::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp:64:3: warning: 'clientserver' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (clientserver == 1) {
   ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp: In member function 'void LAMMPS_NS::Server::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp:43:3: warning: 'protocol' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (protocol == MD) {
   ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_md.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_md.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_md.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/compute_msd_nongauss.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/compute_msd_nongauss.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/compute_msd_nongauss.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp: In member function 'void LAMMPS_NS::ServerMC::loop()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:116:28: warning: 'xold[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
           x[m][2] = xold[2];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:115:28: warning: 'xold[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
           x[m][1] = xold[1];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:114:28: warning: 'xold[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
           x[m][0] = xold[0];
                            ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:15:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom.h:301:57: warning: 'atomid' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else if (map_style == 2) return map_find_hash(global);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:42:10: note: 'atomid' was declared here
   tagint atomid;
          ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/compute_ti.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/compute_ti.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/compute_ti.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_deposit.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_deposit.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_deposit.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_efield.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_efield.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_efield.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'int sizeofint(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:558:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   while (size >= num && num_of_bits < 32) {
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'int sizeofints(int, unsigned int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:599:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   while (bytes[num_of_bytes] >= num) {
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'void sendints(int*, int, int, unsigned int*, unsigned int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:653:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   if (num_of_bits >= num_of_bytes * 8) {
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:654:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (i = 0; i < num_of_bytes; i++) {
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:659:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (i = 0; i < num_of_bytes-1; i++) {
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'int receivebits(int*, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:694:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (lastbits < num_of_bits) {
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'int xdr3dfcoord(XDR*, float*, int*, float*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:396:54: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define LASTIDX (sizeof(magicints) / sizeof(int) - 1 )
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:934:23: note: in expansion of macro 'LASTIDX'
     while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:45:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:938:14: note: in expansion of macro 'MYMIN'
     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:45:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:1114:14: note: in expansion of macro 'MYMIN'
     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
              ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:1140:54: warning: 'bitsizeint[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[2] = receivebits(buf, bitsizeint[2]);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:1139:54: warning: 'bitsizeint[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[1] = receivebits(buf, bitsizeint[1]);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:1138:54: warning: 'bitsizeint[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[0] = receivebits(buf, bitsizeint[0]);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_deposit.cpp: In member function 'virtual void LAMMPS_NS::FixDeposit::pre_exchange()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_deposit.cpp:529:56: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else atom->avec->create_atom(ntype+onemols[imol]->type[m],coords[m]);
                                                        ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_gld.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_gld.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_gld.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_oneway.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_oneway.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_oneway.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp: In member function 'virtual void LAMMPS_NS::FixEvaporate::pre_exchange()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp:322:31: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         } else if (me == proc && i == iatom) {
                               ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_orient_bcc.cpp.o
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[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_viscosity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_viscosity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_viscosity.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:321:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:325:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:326:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:327:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:328:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:329:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:359:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:360:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:361:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:362:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:372:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:376:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:377:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:378:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:379:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:380:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:381:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:413:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:414:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:415:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:416:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:417:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp.o
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:477:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
                                                                 ^
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:149:58: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                         r0n[itype][jtype]*rninv -
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:151:58: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                         r0m[itype][jtype]*rminv) -
                                                          ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/xdr_compat.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/xdr_compat.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/xdr_compat.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:416:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:420:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:421:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:422:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:423:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:424:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:457:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:458:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:459:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:460:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:461:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:462:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:463:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_delta.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_delta.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_delta.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:549:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:549:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:552:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:547:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:559:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:182:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:187:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:192:50: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (mm[itype][jtype]*r0n[itype][jtype]*rninv -
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:193:50: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:184:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:184:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp: In member function 'virtual void LAMMPS_NS::AngleCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp:248:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp:249:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp:250:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k_ub[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp:251:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r_ub[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp: In member function 'virtual void LAMMPS_NS::AngleCosine::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp:196:70: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (comm->me == 0) fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                                      ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp: In member function 'virtual void LAMMPS_NS::AngleCosinePeriodic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp:249:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp:250:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b[1],sizeof(int),atom->nangletypes,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp:251:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineSquared::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp:218:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp:219:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp: In member function 'virtual void LAMMPS_NS::AngleHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp:218:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp:219:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp: In member function 'virtual void LAMMPS_NS::AngleTable::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp:312:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp:313:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_angle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_angle.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_bond.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_bond.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_bond.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_full.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_full.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_full.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_molecular.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_molecular.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_molecular.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_template.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_template.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_template.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp: In member function 'virtual void LAMMPS_NS::BondFENE::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp:218:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp:219:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp:220:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp:221:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp: In member function 'virtual void LAMMPS_NS::BondFENEExpand::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:227:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:228:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:229:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:230:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:231:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp: In member function 'virtual void LAMMPS_NS::BondGromos::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp:169:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp:170:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp:170:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp:171:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp: In member function 'virtual void LAMMPS_NS::BondMorse::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp:174:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&d0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp:175:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp:176:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp: In member function 'virtual void LAMMPS_NS::BondNonlinear::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp:169:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp:170:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp:171:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&lamda[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp: In member function 'virtual void LAMMPS_NS::BondQuartic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:278:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:279:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b1[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:280:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b2[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:281:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&rc[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:282:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&u0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp: In member function 'virtual void LAMMPS_NS::BondTable::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp:255:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp:256:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:426:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:427:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:428:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:429:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:430:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weightflag,sizeof(int),1,fp);
                                        ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmmfsw::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:469:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:470:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:471:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:472:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:473:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weightflag,sizeof(int),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp:330:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp:331:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sign[1],sizeof(int),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp:332:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp: In member function 'virtual void LAMMPS_NS::DihedralHelix::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp:325:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp:326:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp:327:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/fix_cmap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/fix_cmap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/fix_cmap.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralMultiHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:321:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:322:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:323:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:324:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a4[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:325:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a5[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp: In member function 'virtual void LAMMPS_NS::DihedralOPLS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp:333:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp:334:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp:335:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp:336:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:336:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:337:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sign[1],sizeof(int),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:338:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->nimpropertypes,fp);
                                                                ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:206:15: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       pd = -pd;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:205:18: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
       p = 2.0 - p;
                  ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp:277:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp:278:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp: In member function 'virtual void LAMMPS_NS::ImproperUmbrella::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp:318:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kw[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp:319:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&w0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp:320:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp:149:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingLJ::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp:508:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else k = atom->map(klist[kk]+tagprev);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:377:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:381:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:382:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:383:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:384:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:438:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:439:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:440:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_inner,sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:441:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:442:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:443:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp:298:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (donor_flag == 0) type2param[i][j][k] = nparams;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp:371:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (donor_flag == 0) type2param[i][j][k] = nparams;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmm::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:500:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp:119:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:166:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:198:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingMorse::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp:411:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else k = atom->map(klist[kk]+tagprev);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:131:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:131:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/atom_vec_peri.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/atom_vec_peri.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/atom_vec_peri.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:435:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:439:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:440:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:441:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:442:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:472:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:473:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:474:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:475:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:476:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:532:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       philj6 = -lj4[itype][jtype]*r6inv +
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:527:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:477:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:504:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:505:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:506:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:507:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:508:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:510:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:620:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:624:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:625:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:626:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:662:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:663:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:664:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:665:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:666:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:668:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:669:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:670:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:671:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:672:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:194:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl6 = -lj4[itype][jtype]*r6inv +
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:192:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl12 = r6inv*lj3[itype][jtype]*r6inv -
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:335:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:334:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:262:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:258:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_damage_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_damage_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_damage_atom.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:377:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:376:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:304:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:300:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_plasticity_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_plasticity_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_plasticity_atom.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/fix_peri_neigh.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/fix_peri_neigh.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/fix_peri_neigh.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeDilatationAtom::compute_peratom()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp:104:11: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
   double *theta;
           ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriEPS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:567:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:571:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:572:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:573:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:574:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:575:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:576:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_yieldstress[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriLPS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:492:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:496:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:497:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:498:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:499:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:500:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp: In member function 'virtual void LAMMPS_NS::PairPeriPMB::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:421:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:425:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&kspring[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:426:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:427:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:428:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_dynamic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_dynamic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_dynamic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp: In member function 'virtual void LAMMPS_NS::PairPeriVES::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:550:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:554:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:555:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:556:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:557:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:558:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:559:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_lambdai[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:560:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_taubi[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp: In member function 'virtual int LAMMPS_NS::FixQEq::pack_forward_comm(int, int*, double*, int, int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp:480:10: warning: 'm' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return m;
          ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_fire.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_fire.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_fire.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_point.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_point.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_point.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_shielded.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_shielded.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_shielded.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp: In member function 'void LAMMPS_NS::FixPOEMS::readfile(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp:985:26: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (me == 0) fclose(fp);
                          ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_slater.cpp.o
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[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/compute_event_displace.cpp.o
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[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_event.cpp.o
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[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/hyper.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/hyper.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/hyper.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp: In member function 'virtual void LAMMPS_NS::FixHyperGlobal::pre_reverse(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp:305:20: warning: 'r0max' may be used uninitialized in this function [-Wmaybe-uninitialized]
     fbiasr = fbias / r0max / rmax;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp:305:34: warning: 'rmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
     fbiasr = fbias / r0max / rmax;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp:226:18: warning: 'jmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,j,m,imax,jmax;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp:226:13: warning: 'imax' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,j,m,imax,jmax;
             ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/neb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/neb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/neb.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/prd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/prd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/prd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_local.cpp: In member function 'virtual void LAMMPS_NS::FixHyperLocal::pre_reverse(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_local.cpp:479:27: warning: 'ijhalf' may be used uninitialized in this function [-Wmaybe-uninitialized]
     maxhalf[iold] = ijhalf;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp: In member function 'virtual void LAMMPS_NS::FixNEB::min_post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp:615:45: warning: 'lenuntilIm' may be used uninitialized in this function [-Wmaybe-uninitialized]
       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp:615:45: warning: 'idealPos' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp:615:58: warning: 'meanDist' may be used uninitialized in this function [-Wmaybe-uninitialized]
       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
                                                          ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/tad.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/tad.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/tad.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/temper.cpp.o
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[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/verlet_split.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_ehex.cpp: In member function 'virtual void LAMMPS_NS::FixEHEX::init()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_ehex.cpp:198:48: warning: 'id_shake' may be used uninitialized in this function [-Wmaybe-uninitialized]
      fshake = ((FixShake*) modify->fix[id_shake]);
                                                ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nh.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nh_small.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nh_small.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In constructor 'LAMMPS_NS::FixRigid::FixRigid(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:579:51: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (langflag) random = new RanMars(lmp,seed + me);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:396:30: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][2] = zflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:395:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][1] = yflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:394:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][0] = xflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:358:34: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (domain->dimension == 2 && zflag == 1.0)
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:364:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fflag[m-1][1] = yflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:363:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fflag[m-1][0] = xflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:224:32: warning: 'molecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (custom_flag) delete [] molecule;
                                ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph_small.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph_small.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph_small.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_npt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_npt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_npt.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_npt_small.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_npt_small.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_npt_small.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nve.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_xv()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1482:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1477:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1461:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1405:50: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1404:60: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1404:50: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_v()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1627:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1614:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1576:40: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x1 = x[i][1] + ybox*yprd + zbox*yz;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1575:50: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1575:40: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                        ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nve_small.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nve_small.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nve_small.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2223:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           radone = lbonus[line[i]].length;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::readfile(int, double*, double**, double**, double**, LAMMPS_NS::imageint*, int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2296:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
                                                                   ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt_small.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt_small.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt_small.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_static()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2122:32: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (inpfile && inbody[ibody]) continue;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2103:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2020:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         orient[i][0] = lbonus[line[i]].theta - theta_body;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2085:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp.o
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[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_shake.cpp.o
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[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_append_atoms.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_msst.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_msst.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_nphug.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_nphug.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_nphug.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidSmall::write_restart_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2659:26: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (me == 0) fclose(fp);
                          ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_wall_piston.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_wall_piston.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_wall_piston.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_xv()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1394:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1389:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1374:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_v()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1532:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1519:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/atom_vec_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/atom_vec_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/atom_vec_spin.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In constructor 'LAMMPS_NS::FixRigidSmall::FixRigidSmall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:515:57: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (langflag) random = new RanMars(lmp,seed + comm->me);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2380:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           radone = lbonus[line[i]].length;
                                  ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/compute_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/compute_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/compute_spin.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::readfile(int, double**, int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2466:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
                                                                   ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/fix_langevin_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/fix_langevin_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/fix_langevin_spin.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_static()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2264:32: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (inpfile && inbody[ibody]) continue;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2242:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2157:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         orient[i][0] = lbonus[line[i]].theta - theta_body;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2224:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/fix_neb_spin.cpp.o
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[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/fix_nve_spin.cpp.o
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[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/fix_precession_spin.cpp.o
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[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/min_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/min_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/min_spin.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/neb_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/neb_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/neb_spin.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/min_spin.cpp: In member function 'void LAMMPS_NS::MinSpin::advance_spins(double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/min_spin.cpp:245:10: warning: unused variable 'msq' [-Wunused-variable]
   double msq,scale,fm2,energy,dts2;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/min_spin.cpp:245:14: warning: unused variable 'scale' [-Wunused-variable]
   double msq,scale,fm2,energy,dts2;
              ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleCut::compute_single_pair(int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:326:8: warning: unused variable 'ilist' [-Wunused-variable]
   int *ilist,*jlist,*numneigh,**firstneigh;  
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:503:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:507:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
    fread(&cut_spin_long[i][j],sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:532:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_long_global,sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:533:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleLong::compute_single_pair(int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:360:8: warning: variable 'ilist' set but not used [-Wunused-but-set-variable]
   int *ilist,*jlist,*numneigh,**firstneigh;  
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDmi::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:535:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:539:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&DM[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:540:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_dmx[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:541:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_dmy[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:542:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_dmz[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:543:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&vmech_dmx[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:544:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&vmech_dmy[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:545:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&vmech_dmz[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:546:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_dmi[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDmi::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:580:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_dmi_global,sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:581:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:582:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:572:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:576:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_long[i][j],sizeof(int),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:601:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_long_global,sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:602:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp: In member function 'virtual void LAMMPS_NS::PairSpinExchange::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:500:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:504:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&J1_mag[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:505:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&J1_mech[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:506:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&J2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:507:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&J2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:508:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_exchange[i][j],sizeof(double),1,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp: In member function 'virtual void LAMMPS_NS::PairSpinExchange::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:539:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_exchange_global,sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:540:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:541:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_sna_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_sna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_sna_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp: In member function 'virtual void LAMMPS_NS::PairSpinMagelec::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:519:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:523:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&ME[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:524:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_mex[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:525:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_mey[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:526:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_mez[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:527:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_magelec[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp: In member function 'virtual void LAMMPS_NS::PairSpinMagelec::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:557:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_magelec_global,sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:558:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:559:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snad_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snad_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snad_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp: In member function 'virtual void LAMMPS_NS::PairSpinNeel::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:690:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:694:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&g1[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:695:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&g1_mech[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:696:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&g2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:697:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&g2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:698:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&q1[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:699:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&q1_mech[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:700:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&q2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:701:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&q2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:702:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_neel[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp: In member function 'virtual void LAMMPS_NS::PairSpinNeel::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:736:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_neel_global,sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:737:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:738:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snav_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snav_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snav_atom.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp: In member function 'void LAMMPS_NS::PairSNAP::compute_bispectrum()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp:276:15: warning: unused variable 'numneigh' [-Wunused-variable]
   int *jlist,*numneigh,**firstneigh;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp:276:26: warning: unused variable 'firstneigh' [-Wunused-variable]
   int *jlist,*numneigh,**firstneigh;
                          ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp: In member function 'void LAMMPS_NS::SNA::compute_zi()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:351:7: warning: unused variable 'ma2' [-Wunused-variable]
   int ma2, mb2;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:351:12: warning: unused variable 'mb2' [-Wunused-variable]
   int ma2, mb2;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp: In member function 'void LAMMPS_NS::SNA::compute_yi(const double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:436:9: warning: unused variable 'mb' [-Wunused-variable]
     int mb = (2 * (mb1min+mb2max) - j1 - j2 + j) / 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:437:9: warning: unused variable 'ma' [-Wunused-variable]
     int ma = (2 * (ma1min+ma2max) - j1 - j2 + j) / 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:408:7: warning: unused variable 'j' [-Wunused-variable]
   int j;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:409:7: warning: unused variable 'jjz' [-Wunused-variable]
   int jjz;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:423:7: warning: unused variable 'ma2' [-Wunused-variable]
   int ma2, mb2;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:423:12: warning: unused variable 'mb2' [-Wunused-variable]
   int ma2, mb2;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp: In member function 'void LAMMPS_NS::SNA::compute_deidrj(double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:550:11: warning: unused variable 'ma' [-Wunused-variable]
       int ma = mb;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp: In member function 'void LAMMPS_NS::SNA::compute_dbidrj()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:709:11: warning: unused variable 'ma' [-Wunused-variable]
       int ma = mb;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:759:11: warning: unused variable 'ma' [-Wunused-variable]
       int ma = mb;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:809:11: warning: unused variable 'ma' [-Wunused-variable]
       int ma = mb;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:659:12: warning: unused variable 'jjjzarray_r' [-Wunused-variable]
   double** jjjzarray_r;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:660:12: warning: unused variable 'jjjzarray_i' [-Wunused-variable]
   double** jjjzarray_i;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:661:10: warning: unused variable 'jjjmambzarray_r' [-Wunused-variable]
   double jjjmambzarray_r;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:662:10: warning: unused variable 'jjjmambzarray_i' [-Wunused-variable]
   double jjjmambzarray_i;
          ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/fix_store_kim.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/fix_store_kim.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/fix_store_kim.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp: In constructor 'LAMMPS_NS::FixWallSRD::FixWallSRD(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp:65:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp: In member function 'void LAMMPS_NS::KimInit::do_init(char*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp:294:7: warning: variable 'kimerror' set but not used [-Wunused-but-set-variable]
   int kimerror;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_static()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2965:25: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       c1 = tbonus[tri[i]].c1;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2953:30: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       length = lbonus[line[i]].length;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2937:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = ebonus[ellipsoid[i]].shape;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_dynamic()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:3048:30: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       inertia = tbonus[tri[i]].inertia;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:3035:40: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       biglist[k].theta = lbonus[line[i]].theta;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:3023:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = ebonus[ellipsoid[i]].shape;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp: In member function 'void LAMMPS_NS::KimQuery::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:92:9: warning: variable 'varname' set but not used [-Wunused-but-set-variable]
   char *varname, *function, *value;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:92:19: warning: variable 'function' set but not used [-Wunused-but-set-variable]
   char *varname, *function, *value;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:92:30: warning: unused variable 'value' [-Wunused-variable]
   char *varname, *function, *value;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:98:10: warning: variable 'model_name' set but not used [-Wunused-but-set-variable]
   char * model_name;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:108:8: warning: variable 'split' set but not used [-Wunused-but-set-variable]
   bool split = false;
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::reset_velocities()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1016:33: warning: 'dof_tstat' may be used uninitialized in this function [-Wmaybe-uninitialized]
       tbin = vbin[i].value[0]/(n-dof_tstat) * tfactor;
                                 ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp: In member function 'void LAMMPS_NS::KimInteractions::do_setup(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp:147:5: warning: 'fixed_types' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (!fixed_types) {
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::parameterize()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2682:37: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double *c1 = tbonus[tri[i]].c1;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2702:41: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double length = lbonus[line[i]].length;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2699:46: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double *shape = ebonus[ellipsoid[i]].shape;
                                              ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/pair_kim.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/pair_kim.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/pair_kim.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp: In function 'double {anonymous}::get_temperature_conversion_factor({anonymous}::units, {anonymous}::units)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp:1019:10: warning: unused variable 'to_si' [-Wunused-variable]
   double to_si;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::collisions_multi()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1547:33: warning: 'xbcollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[2] = xbcollfirst[2];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1546:33: warning: 'xbcollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[1] = xbcollfirst[1];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1545:33: warning: 'xbcollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[0] = xbcollfirst[0];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1544:33: warning: 'xscollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[2] = xscollfirst[2];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1543:33: warning: 'xscollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[1] = xscollfirst[1];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1542:33: warning: 'xscollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[0] = xscollfirst[0];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1550:29: warning: 'normfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[2] = normfirst[2];
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1549:29: warning: 'normfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[1] = normfirst[1];
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1548:29: warning: 'normfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[0] = normfirst[0];
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1575:32: warning: 'typefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (collidestyle == SLIP && type == SPHERE)
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1580:33: warning: 'jfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
         force_wall(v[i],vsnew,j);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp:88:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp:105:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
              ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/pair_python.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/pair_python.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/pair_python.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::init()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:139:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_init, NULL);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:157:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_initial_integrate, arglist);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:175:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_final_integrate, NULL);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate_respa(int, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:193:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_initial_integrate_respa, arglist);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate_respa(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:212:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_final_integrate_respa, arglist);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::reset_dt()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:230:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_reset_dt, NULL);
              ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_atom_mpiio.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_atom_mpiio.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_atom_mpiio.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_cfg_mpiio.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_cfg_mpiio.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_cfg_mpiio.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp: In member function 'int LAMMPS_NS::PythonImpl::create_entry(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp:412:47: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   else if (format && strlen(format) != ninput+noutput)
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp: In member function 'virtual void LAMMPS_NS::PythonImpl::invoke_function(int, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp:322:36: warning: 'pValue' may be used uninitialized in this function [-Wmaybe-uninitialized]
     PyTuple_SetItem(pArgs,i,pValue);
                                    ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_custom_mpiio.cpp.o
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[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC/fix_atc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC/fix_atc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC/fix_atc.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp: In member function 'void LAMMPS_NS::ComputeVoronoi::processCell(voro::voronoicell_neighbor&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp:514:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for (j=0; j<narea.size(); ++j)
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp:529:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       if (neighs != narea.size())
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp:546:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         for( j=0; j<vlist.size(); j+=vlist[j]+1 ) {
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp:590:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       if (neighs != narea.size())
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'double LAMMPS_NS::ComputePressureBocs::get_cg_p_corr(double**, int, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp:250:10: warning: 'correction' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return correction;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'virtual double LAMMPS_NS::ComputePressureBocs::compute_scalar()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp:347:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       scalar = (temperature->dof * boltz * t +
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'virtual void LAMMPS_NS::ComputePressureBocs::compute_vector()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp:394:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
                               ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/fix_bocs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/fix_bocs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/fix_bocs.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna2_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna2_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna2_fene.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/fix_nve_dot.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/fix_nve_dot.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/fix_nve_dot.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp: In member function 'virtual void LAMMPS_NS::BondOxdnaFene::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp:382:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp:383:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&Delta[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp:384:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/fix_nve_dotc_langevin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/fix_nve_dotc_langevin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/fix_nve_dotc_langevin.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:685:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:832:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:837:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&k_cxst[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:838:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_0[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:839:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_c[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:840:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_lo[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:841:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_hi[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:842:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_lc[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:843:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_hc[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:844:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst_lo[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:845:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst_hi[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:847:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:848:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst1_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:849:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst1_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:850:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:851:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst1_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:853:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:854:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst4_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:855:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst4_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:856:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:857:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst4_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:859:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst5[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:860:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst5_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:861:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst5_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:862:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst5[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:863:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst5_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:865:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst6[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:866:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst6_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:867:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst6_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:868:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst6[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:869:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst6_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:871:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&AA_cxst1[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:872:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&BB_cxst1[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:936:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:937:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:938:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_excv.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_excv.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_excv.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:367:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:453:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:458:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&kappa_dh[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:459:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&qeff_dh_pf[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:460:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_dh[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:461:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_dh_ast[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:462:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_dh_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:495:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:496:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:497:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:831:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:991:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:996:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&k_cxst[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:997:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_0[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:998:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_c[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:999:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_lo[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1000:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_hi[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1001:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_lc[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1002:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_hc[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1003:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst_lo[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1004:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst_hi[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1006:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1007:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst1_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1008:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst1_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1009:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1010:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst1_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1012:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1013:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst4_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1014:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst4_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1015:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1016:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst4_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1018:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst5[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1019:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst5_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1020:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst5_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1021:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst5[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1022:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst5_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1024:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst6[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1025:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst6_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1026:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst6_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1027:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst6[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1028:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst6_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1030:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst3p[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1031:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_cxst3p_ast[i][j],sizeof(double),1,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1032:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst3p[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1033:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_cxst3p_c[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1034:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst4p[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1035:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_cxst4p_ast[i][j],sizeof(double),1,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1036:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst4p[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1037:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_cxst4p_c[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1107:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1108:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1109:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:571:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:713:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:718:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_ss[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:719:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_ss[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:720:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_ss_ast[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:721:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_ss[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:722:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_ss_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:723:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_sb[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:724:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_sb[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:725:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_sb_ast[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:726:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_sb[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:727:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_sb_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:728:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_bb[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:729:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_bb[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:730:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_bb_ast[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:731:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_bb[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:732:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_bb_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:775:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:776:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:777:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:797:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:976:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:981:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_hb[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:982:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:983:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_0[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:984:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:985:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_lo[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:986:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_hi[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:987:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_lc[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:988:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_hc[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:989:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb_lo[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:990:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb_hi[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:991:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shift_hb[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:993:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb1[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:994:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb1_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:995:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb1_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:996:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb1[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:997:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb1_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:999:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb2[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1000:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb2_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1001:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb2_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1002:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb2[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1003:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb2_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1005:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb3[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1006:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb3_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1007:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb3_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1008:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb3[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1009:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb3_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1011:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb4[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1012:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb4_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1013:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb4_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1014:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb4[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1015:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb4_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1017:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb7[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1018:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb7_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1019:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb7_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1020:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb7[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1021:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb7_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1023:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb8[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1024:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb8_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1025:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb8_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1026:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb8[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1027:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb8_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1102:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1103:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1104:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:920:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1082:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1087:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_st[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1088:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1089:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_0[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1090:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1091:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_lo[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1092:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_hi[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1093:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_lc[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1094:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_hc[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1095:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st_lo[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1096:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st_hi[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1097:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shift_st[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1099:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st4[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1100:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_st4_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1101:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st4_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1102:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st4[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1103:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st4_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1105:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st5[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1106:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_st5_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1107:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st5_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1108:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st5[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1109:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st5_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1111:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st6[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1112:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_st6_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1113:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st6_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1114:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st6[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1115:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st6_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1117:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st1[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1118:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_st1_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1119:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st1[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1120:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_st1_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1121:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st2[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1122:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_st2_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1123:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st2[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1124:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_st2_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1190:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1191:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1192:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_edpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_edpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_edpd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:785:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:950:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:955:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&k_xst[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:956:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_0[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:957:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_c[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:958:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_lo[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:959:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_hi[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:960:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_lc[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:961:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_hc[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:962:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst_lo[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:963:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst_hi[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:965:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst1[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:966:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst1_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:967:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst1_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:968:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst1[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:969:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst1_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:971:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst2[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:972:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst2_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:973:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst2_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:974:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst2[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:975:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst2_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:977:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst3[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:978:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst3_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:979:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst3_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:980:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst3[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:981:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst3_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:983:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst4[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:984:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst4_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:985:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst4_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:986:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst4[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:987:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst4_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:989:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst7[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:990:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst7_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:991:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst7_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:992:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst7[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:993:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst7_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:995:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst8[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:996:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst8_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:997:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst8_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:998:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst8[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:999:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst8_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1072:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1073:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1074:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_mdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_mdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_mdpd.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_tdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_tdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_tdpd.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/compute_edpd_temp_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/compute_edpd_temp_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/compute_edpd_temp_atom.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/compute_tdpd_cc_atom.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd_rhosum.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd_rhosum.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd_rhosum.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:455:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:459:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:460:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:461:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&power[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:462:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:463:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&kappa[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:464:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&powerT[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:465:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cutT[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:468:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&sc[i][j][k],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:472:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&kc[i][j][k],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:510:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:511:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:512:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp: In member function 'virtual void LAMMPS_NS::PairMDPD::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:350:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:354:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&A_att[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:355:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&B_rep[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:356:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:357:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:358:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_r[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp: In member function 'virtual void LAMMPS_NS::PairMDPD::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:388:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&temperature,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:389:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:390:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:391:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:221:34: warning: 'dQr' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Q[j]    -= ( dQc - dQd + dQr );
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:221:28: warning: 'dQd' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Q[j]    -= ( dQc - dQd + dQr );
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:221:28: warning: 'dQc' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp: In member function 'virtual void LAMMPS_NS::PairTDPD::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:397:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:401:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:402:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:403:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&power[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:404:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:405:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cutcc[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:407:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&kappa[i][j][k],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:408:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&epsilon[i][j][k],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:409:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&powercc[i][j][k],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp: In member function 'virtual void LAMMPS_NS::PairTDPD::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:445:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&temperature,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:446:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:447:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:448:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp: In member function 'virtual void LAMMPS_NS::AngleSDK::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp:335:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp:336:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp:337:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&repscale[1],sizeof(double),atom->nangletypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDK::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:376:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:380:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lj_type[i][j],sizeof(int),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:381:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:382:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:383:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDK::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:413:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:414:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:415:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:416:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDKCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:468:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:472:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lj_type[i][j],sizeof(int),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:473:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:474:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:475:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDKCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:507:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:508:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:509:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:510:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:511:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:512:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:513:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/colvarproxy_lammps.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/colvarproxy_lammps.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/colvarproxy_lammps.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp: In function 'void write_group(FILE*, int, LAMMPS_NS::Atom*, LAMMPS_NS::Group*, int, int, MPI_Comm, FILE*, FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp:131:25: warning: 'recvlist' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (num > 0) delete[] recvlist;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp: In member function 'virtual void LAMMPS_NS::FixColvars::setup(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp:558:33: warning: unused variable 'id' [-Wunused-variable]
     std::vector<int>           &id = *(proxy->modify_atom_ids());
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp: In member function 'void LAMMPS_NS::Group2Ndx::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp:165:80: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
       write_group(fp,gid,atom,group,comm->me,comm->nprocs,world,screen,logfile);
                                                                                ^
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_saed.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_saed.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_saed.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp: In member function 'void LAMMPS_NS::Ndx2Group::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp:127:37: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
         name = find_section(fp,NULL);
                                     ^
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_xrd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_xrd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_xrd.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/atom_vec_dpd.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/compute_dpd.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp: In member function 'void LAMMPS_NS::FixEOStable::read_table(LAMMPS_NS::FixEOStable::Table*, LAMMPS_NS::FixEOStable::Table*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:217:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:219:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:220:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:226:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:236:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:238:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_shardlow.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_shardlow.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_shardlow.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp: In member function 'void LAMMPS_NS::FixEOStableRX::read_table(LAMMPS_NS::FixEOStableRX::Table*, LAMMPS_NS::FixEOStableRX::Table*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:436:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:438:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:439:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:445:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:473:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:475:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix.h:17:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:14:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp: In member function 'virtual void LAMMPS_NS::FixRX::post_constructor()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pointers.h:37:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define MAX(A,B) ((A) > (B) ? (A) : (B))
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:324:24: note: in expansion of macro 'MAX'
         tmpmaxstrlen = MAX(tmpmaxstrlen,strlen(word));
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp: In member function 'void LAMMPS_NS::FixRX::initSparse()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:549:59: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             if (sparseKinetics_inu[i][idx] >= nu_bin.size())
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:567:59: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             if (sparseKinetics_inu[i][idx] >= nu_bin.size())
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:583:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i = 1; i < nu_bin.size(); ++i)
                                     ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nbin_ssa.cpp.o
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[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonSSA::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:207:54: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                        tag[j]-tagprev);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:205:68: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                   which = find_special(onemols[imol]->special[iatom],
                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:205:52: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                   which = find_special(onemols[imol]->special[iatom],
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:316:7: warning: unused variable 'irequest' [-Wunused-variable]
   int irequest = neighbor->request(this,instance_me);
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:378:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:382:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:383:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:384:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:413:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&temperature,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:414:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:415:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:416:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:409:7: warning: unused variable 'irequest' [-Wunused-variable]
   int irequest = neighbor->request(this,instance_me);
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:479:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:483:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:484:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:485:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&kappa[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:486:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:516:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:517:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:518:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'virtual void LAMMPS_NS::PairExp6rx::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:971:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:975:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'virtual void LAMMPS_NS::PairExp6rx::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1001:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1002:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1003:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1004:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'void LAMMPS_NS::PairMultiLucy::read_table(LAMMPS_NS::PairMultiLucy::Table*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:365:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:367:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:368:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:374:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:387:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:389:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucy::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:708:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:709:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'void LAMMPS_NS::PairMultiLucyRX::read_table(LAMMPS_NS::PairMultiLucyRX::Table*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:510:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:512:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:513:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:519:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:532:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:534:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucyRX::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:853:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:854:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'void LAMMPS_NS::PairExp6rx::getMixingWeights(int, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&) const':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1221:32: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1235:35: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1214:32: warning: 'nMolecules1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1228:35: warning: 'nMoleculesOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1221:5: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1235:5: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1214:5: warning: 'fraction1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1228:5: warning: 'fractionOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucy::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:177:24: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
         f[i][2] += delz*fpair;
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:189:52: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (rho[i]*rho[i] < tb->innersq || rho[j]*rho[j] < tb->innersq)
                                                    ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/compute_temp_drude.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/compute_temp_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/compute_temp_drude.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp: In member function 'void LAMMPS_NS::PairTableRX::getMixingWeights(int, double&, double&, double&, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:577:29: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2 = nMolecules2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:576:35: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2old = nMoleculesOld2;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:572:27: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2 = fraction2;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:571:33: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2old = fractionOld2;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:575:29: warning: 'nMolecules1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1 = nMolecules1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:574:35: warning: 'nMoleculesOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1old = nMoleculesOld1;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:570:27: warning: 'fraction1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1 = fraction1;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:569:33: warning: 'fractionOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1old = fractionOld1;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'void LAMMPS_NS::PairMultiLucyRX::getMixingWeights(int, double&, double&, double&, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1015:29: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2 = nMolecules2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1014:35: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2old = nMoleculesOld2;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1010:27: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2 = fraction2;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1009:33: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2old = fractionOld2;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1013:29: warning: 'nMolecules1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1 = nMolecules1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1012:35: warning: 'nMoleculesOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1old = nMoleculesOld1;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1008:27: warning: 'fraction1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1 = fraction1;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1007:33: warning: 'fractionOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1old = fractionOld1;
                                 ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_langevin_drude.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_langevin_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_langevin_drude.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp: In member function 'int LAMMPS_NS::FixDrudeTransform<inverse>::pack_forward_comm(int, int*, double*, int, int*) [with bool inverse = false]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp:294:13: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
             buf[m++] = x[j][2] + dz;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:360:7: warning: unused variable 'irequest' [-Wunused-variable]
   int irequest = neighbor->request(this,instance_me);
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp: In member function 'int LAMMPS_NS::FixDrudeTransform<inverse>::pack_forward_comm(int, int*, double*, int, int*) [with bool inverse = true]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp:294:13: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:491:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:495:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:496:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:497:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&polar[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:498:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&thole[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:500:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:536:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:537:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:538:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&thole_global,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:539:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:540:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:541:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:542:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:543:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:544:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/atom_vec_electron.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/atom_vec_electron.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/atom_vec_electron.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutTholeLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:668:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:661:78: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (drudetype[type[i]] != NOPOL_TYPE && drudetype[type[j]] != NOPOL_TYPE &&
                                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:663:27: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul += factor_e * dcoul;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:663:27: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:657:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:657:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:660:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:655:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:226:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:227:33: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:190:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:227:33: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:219:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:224:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:221:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:232:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:222:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = qi*qj * table;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:221:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp: In member function 'virtual void LAMMPS_NS::PairThole::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:314:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:318:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&polar[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:319:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&thole[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:320:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp: In member function 'virtual void LAMMPS_NS::PairThole::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:350:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&thole_global,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:351:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:352:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:353:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_atom_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_atom_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_atom_eff.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_eff.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_temp_deform_eff.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/fix_adapt_fep.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/fix_adapt_fep.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/fix_adapt_fep.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp: In member function 'virtual void LAMMPS_NS::PairEffCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:968:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:971:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&cut[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp: In member function 'virtual void LAMMPS_NS::PairEffCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:995:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:996:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:997:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCutSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:275:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:279:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:280:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCutSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:309:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:310:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:312:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:313:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:314:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:362:80: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:297:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:301:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:328:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:329:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:331:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:332:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:333:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:383:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:387:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:388:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:389:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:390:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:391:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:426:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:427:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:428:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:430:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:431:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:432:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:433:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:434:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:839:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:843:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:844:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:845:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:846:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:847:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:882:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:883:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:884:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:886:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:887:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:888:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:889:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:890:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:372:82: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     prefactor = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:373:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:499:37: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:494:78: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e *lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:142:80: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:980:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (1.0/(denlj*denlj) - 1.0/denlj);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:972:81: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:973:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:526:71: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:547:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:548:66: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:547:58: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:547:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:186:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (1.0/(denlj*denlj) - 1.0/denlj);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:179:70: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:180:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:399:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:403:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:404:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:405:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:406:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:440:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:441:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:442:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:444:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:445:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:446:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:447:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:448:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:522:37: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:516:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:515:81: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:158:70: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:159:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2Soft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:322:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:326:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:327:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:328:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:329:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2Soft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:361:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:362:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:363:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:364:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:365:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:366:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:379:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:383:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:384:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:385:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:386:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:387:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:422:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:423:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:424:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:426:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:427:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:428:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:429:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:430:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:795:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:799:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:800:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:801:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:802:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:836:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:837:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:838:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:840:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:841:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:842:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:843:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:844:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:496:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:491:79: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:147:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:143:80: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                                ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:926:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:918:81: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:919:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:656:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:660:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:661:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:662:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:663:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:696:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:697:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:699:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:700:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:701:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:702:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:491:71: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:507:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:508:66: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:507:58: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:507:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                                     ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:754:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:519:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:520:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:521:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:522:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:523:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:525:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:526:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:527:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:528:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:529:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:174:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:167:70: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:168:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:411:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:391:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:390:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:318:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:314:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:315:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:319:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:320:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:321:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:322:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:323:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD/dump_h5md.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD/dump_h5md.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD/dump_h5md.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_manifoldforce.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_manifoldforce.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_manifoldforce.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:456:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:457:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:458:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:459:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:460:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:359:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:358:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:286:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:282:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp.o
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[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_dens_final.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_dens_final.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_dens_final.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_thylakoid.cpp: In member function 'virtual void LAMMPS_NS::user_manifold::manifold_thylakoid::checkup()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_thylakoid.cpp:62:65: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'std::vector<LAMMPS_NS::user_manifold::thyla_part*>::size_type {aka unsigned int}' [-Wformat=]
     fprintf(screen,"I have %ld parts. They are:\n", parts.size());
                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_thylakoid.cpp:63:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for( int i = 0; i < parts.size(); ++i ){
                                    ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_dens_init.cpp.o
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_force.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_force.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_force.cpp
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[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_linalg.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_linalg.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_linalg.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp: In member function 'void potdata::readpot(const char*, const char*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:394:13: warning: variable 'dp' set but not used [-Wunused-but-set-variable]
    double f,dp;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:375:18: warning: variable 'alm' set but not used [-Wunused-but-set-variable]
  double alp = al,alm = al;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:158:19: warning: variable 'dr' set but not used [-Wunused-but-set-variable]
   double x0,x1,dx,dr;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:187:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:203:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:246:34: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,sizeof(line),in);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:306:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:329:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:331:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:334:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:343:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:345:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:358:34: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,sizeof(line),in);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp: In function 'void getparmindata(const char*, int*, double*, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:109:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:119:34: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,sizeof(line),in);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:123:34: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,sizeof(line),in);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_setup_done.cpp: In member function 'double LAMMPS_NS::MEAM::phi_meam(double, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_setup_done.cpp:450:21: warning: 'rho0_2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rhobar2 = rho02 / rho_bkgd2 * G2;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_setup_done.cpp:449:21: warning: 'rho0_1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rhobar1 = rho01 / rho_bkgd1 * G1;
                     ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_splinetab.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_splinetab.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_splinetab.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/pair_meamc.cpp: In member function 'void LAMMPS_NS::PairMEAMC::read_files(char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/pair_meamc.cpp:590:69: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
     meam_inst->meam_setup_param(which,value,nindex,index,&errorflag);
                                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::compute_x(const int*, const int* const*, double*, double*, double*, double*, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:593:24: warning: unused variable 'mx' [-Wunused-variable]
   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:593:27: warning: unused variable 'itag' [-Wunused-variable]
   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:593:32: warning: unused variable 'jtag' [-Wunused-variable]
   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:598:10: warning: unused variable 'nbc' [-Wunused-variable]
   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:598:20: warning: unused variable 'tbl' [-Wunused-variable]
   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:598:30: warning: unused variable 'tbm' [-Wunused-variable]
   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:599:13: warning: unused variable 'lmax_local' [-Wunused-variable]
   const int lmax_local = lmax;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:608:10: warning: variable 't0' set but not used [-Wunused-but-set-variable]
   double t0,t1;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:608:13: warning: variable 't1' set but not used [-Wunused-but-set-variable]
   double t0,t1;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:617:18: warning: unused variable 'tsort' [-Wunused-variable]
   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:617:42: warning: unused variable 'tlookup' [-Wunused-variable]
   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:619:10: warning: unused variable 'ntsort' [-Wunused-variable]
   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:619:36: warning: unused variable 'ntlookup' [-Wunused-variable]
   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'virtual void LAMMPS_NS::PairMGPT::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:1837:9: warning: variable 'volpres_tag' set but not used [-Wunused-but-set-variable]
     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:1837:25: warning: variable 'precision_tag' set but not used [-Wunused-but-set-variable]
     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_5_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 64u))[1]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 64u))[1]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 64u))[1]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 64u))[1]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(1,1);
   ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 128u))[2]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 128u))[2]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 128u))[2]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 128u))[2]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 192u))[3]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 192u))[3]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 192u))[3]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 192u))[3]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 256u))[4]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 256u))[4]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 256u))[4]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 256u))[4]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 320u))[5]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 320u))[5]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 320u))[5]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 320u))[5]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_7_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 64u))[1]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 64u))[1]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 64u))[1]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 64u))[1]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 128u))[2]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 128u))[2]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 128u))[2]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 128u))[2]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 192u))[3]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 192u))[3]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 192u))[3]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(3,3);
   ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 192u))[3]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 256u))[4]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 256u))[4]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 256u))[4]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 256u))[4]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 320u))[5]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 320u))[5]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 320u))[5]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 320u))[5]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 384u))[6]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(6,6);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 384u))[6]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(6,6);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 384u))[6]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(6,6);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 384u))[6]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(6,6);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 448u))[7]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(7,7);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 448u))[7]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(7,7);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 448u))[7]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(7,7);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 448u))[7]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(7,7);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineShift::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp:227:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
        fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp:228:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
        fread(&kcost[1],sizeof(double),atom->nangletypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp:229:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
        fread(&ksint[1],sizeof(double),atom->nangletypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp:230:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
        fread(&theta[1],sizeof(double),atom->nangletypes,fp);
                                                            ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineShiftExp::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:259:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&umin[1],sizeof(double),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:260:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&a[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:261:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&cost[1],sizeof(double),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:262:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&sint[1],sizeof(double),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:263:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp: In member function 'virtual void LAMMPS_NS::AngleDipole::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp:208:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp:209:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gamma0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp: In member function 'virtual void LAMMPS_NS::AngleFourier::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp:234:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp:235:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C0[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp:236:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C1[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp:237:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp: In member function 'virtual void LAMMPS_NS::AngleFourierSimple::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp:240:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp:241:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp:242:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&N[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp: In member function 'virtual void LAMMPS_NS::AngleQuartic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp:235:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp:236:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp:237:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp:238:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_ackland_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_ackland_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_ackland_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonicShift::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp:179:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp:180:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp:181:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r1[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_basal_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_basal_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_basal_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonicShiftCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:181:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:182:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:183:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r1[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_cnp_atom.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_gyration_shape.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_stress_mop_profile.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_stress_mop_profile.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_stress_mop_profile.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_pressure_grem.cpp: In member function 'virtual double LAMMPS_NS::ComputePressureGrem::compute_scalar()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_pressure_grem.cpp:93:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       scalar = (temperature->dof * boltz * t +
                                          ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_temp_rotate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_temp_rotate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_temp_rotate.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp: In member function 'virtual void LAMMPS_NS::DihedralCosineShiftExp::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:324:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&umin[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:325:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:326:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cost[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:327:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sint[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:328:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta[1],sizeof(double),atom->ndihedraltypes,fp);
                                                            ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp: In member function 'virtual void LAMMPS_NS::DihedralFourier::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp:367:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp:382:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(k[i],sizeof(double),nterms[i],fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp:383:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(multiplicity[i],sizeof(int),nterms[i],fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp:384:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(shift[i],sizeof(double),nterms[i],fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralNHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp:321:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp:331:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(a[i],sizeof(double),nterms[i],fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp: In member function 'virtual void LAMMPS_NS::DihedralQuadratic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp:328:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp:329:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi0[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: At global scope:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:575:13: warning: 'void tr_count(const double*, const double*, double*, const double*, double*, const double*, double*)' defined but not used [-Wunused-function]
 static void tr_count(const double * restrict A,
             ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_addtorque.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_addtorque.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_addtorque.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp: In member function 'virtual void LAMMPS_NS::DihedralSpherical::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:758:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:778:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(Ccoeff[i],sizeof(double),nterms[i],fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:779:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(phi_mult[i],sizeof(double),nterms[i],fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:780:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(phi_shift[i],sizeof(double),nterms[i],fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:781:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(phi_offset[i],sizeof(double),nterms[i],fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:782:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta1_mult[i],sizeof(double),nterms[i],fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:783:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta1_shift[i],sizeof(double),nterms[i],fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:784:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta1_offset[i],sizeof(double),nterms[i],fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:785:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta2_mult[i],sizeof(double),nterms[i],fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:786:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta2_shift[i],sizeof(double),nterms[i],fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:787:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta2_offset[i],sizeof(double),nterms[i],fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp: In member function 'virtual void LAMMPS_NS::DihedralTable::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp:1045:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp:1046:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp: In member function 'virtual void LAMMPS_NS::DihedralTableCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp:1032:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp:1033:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelateLong::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp:507:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::read(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:2769:22: warning: variable 'edgeflag' set but not used [-Wunused-but-set-variable]
   int equivflag = 0, edgeflag = 0, bondflag = 0, customedgesflag = 0;
                      ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_electron_stopping.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_electron_stopping.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_electron_stopping.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ffl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ffl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ffl.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_filter_corotate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_filter_corotate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_filter_corotate.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::dedup_mega_gloves(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:1842:27: warning: 'dedup_size' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (int i = dedup_size-1; i > 0; --i) { //dedup_size
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::limit_bond(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:2003:79: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (stabilization_flag == 1) i_statted_tags[atom->map(temp_limit_glove[i])] = 0;
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:1980:15: warning: 'temp_limit_glove' may be used uninitialized in this function [-Wmaybe-uninitialized]
     delete [] temp_limit_glove;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::unlimit_bond()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:2038:57: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (stabilization_flag == 1) i_statted_tags[i] = 1;
                                                         ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_flow_gauss.cpp.o
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[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_gle.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ti_spring.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ti_spring.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_ees.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_ees.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_ees.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp: In constructor 'LAMMPS_NS::FixTTMMod::FixTTMMod(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:120:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:121:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:125:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:126:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:130:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:131:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:135:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:136:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:145:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:146:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:150:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:151:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:155:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:156:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:160:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:161:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:165:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:166:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:170:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:171:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:175:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:176:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:180:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:181:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:185:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:186:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:190:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:191:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:195:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:196:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:200:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:201:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:205:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:206:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:210:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:211:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:215:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:216:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:220:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:221:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:225:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:226:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_region_ees.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_region_ees.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_region_ees.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp: In member function 'virtual void LAMMPS_NS::ImproperCossq::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp:304:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp:305:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp: In member function 'virtual void LAMMPS_NS::ImproperDistance::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp:250:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp:251:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp: In member function 'virtual void LAMMPS_NS::ImproperFourier::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:328:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:329:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:330:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C1[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:331:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C2[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:332:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&all[1],sizeof(int),atom->nimpropertypes,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp: In member function 'virtual void LAMMPS_NS::ImproperRing::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp:328:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp:329:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp: In member function 'virtual void LAMMPS_NS::PairAGNI::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:220:78: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (evflag) ev_tally_xyz_full(i,0.0,0.0,fxtmp,fytmp,fztmp,delx,dely,delz);
                                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:220:78: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:220:78: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairBuckMDF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:305:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:309:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:310:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:311:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:312:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairBuckMDF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:341:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:342:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:343:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:344:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp: In member function 'void LAMMPS_NS::PairAGNI::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:460:70: warning: 'wantdata' may be used uninitialized in this function [-Wmaybe-uninitialized]
     } else if (params && (wantdata >=0) && (nwords == params[wantdata].numeta+3)) {
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:430:26: warning: 'curparam' may be used uninitialized in this function [-Wmaybe-uninitialized]
     } else if ((curparam >=0) && (nwords == 1) && (strcmp(words[0],"endVar") == 0)) {
                          ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_drip.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_drip.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_drip.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDiel::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:285:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rme[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:286:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigmae[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:287:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDiel::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:314:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:315:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:316:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp: In member function 'virtual void LAMMPS_NS::PairCoulShield::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:301:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigmae[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:302:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp: In member function 'virtual void LAMMPS_NS::PairCoulShield::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:328:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:329:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:330:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip_multi.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip_multi.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip_multi.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp: In member function 'void LAMMPS_NS::PairE3B::presetParam(int, bool&, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp:617:17: warning: 'lconv' may be used uninitialized in this function [-Wmaybe-uninitialized]
   bondL *= lconv*BOND_DELTA;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp:611:14: warning: 'econv' may be used uninitialized in this function [-Wmaybe-uninitialized]
   e2 *= econv;
              ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_extep.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_extep.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_extep.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp: In member function 'virtual void LAMMPS_NS::PairGaussCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:303:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:307:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&hgauss[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:308:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rmh[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:309:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigmah[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:310:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp: In member function 'virtual void LAMMPS_NS::PairGaussCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:339:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:340:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:341:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp: In member function 'void LAMMPS_NS::PairILPGrapheneHBN::calc_FvdW(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:451:39: warning: unused variable 'k' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:451:41: warning: unused variable 'l' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:451:43: warning: unused variable 'kk' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:451:46: warning: unused variable 'll' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp: In member function 'void LAMMPS_NS::PairILPGrapheneHBN::calc_FRep(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:552:38: warning: unused variable 'r2inv' [-Wunused-variable]
   double rsq,r,Rcut,rhosq1,exp0,exp1,r2inv,r6inv,r8inv,Tap,dTap,Vilp;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:552:44: warning: unused variable 'r6inv' [-Wunused-variable]
   double rsq,r,Rcut,rhosq1,exp0,exp1,r2inv,r6inv,r8inv,Tap,dTap,Vilp;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:552:50: warning: unused variable 'r8inv' [-Wunused-variable]
   double rsq,r,Rcut,rhosq1,exp0,exp1,r2inv,r6inv,r8inv,Tap,dTap,Vilp;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:553:16: warning: unused variable 'TSvdw' [-Wunused-variable]
   double frho1,TSvdw,TSvdw2inv,Erep,fsum,rdsq1;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:553:22: warning: unused variable 'TSvdw2inv' [-Wunused-variable]
   double frho1,TSvdw,TSvdw2inv,Erep,fsum,rdsq1;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:555:22: warning: unused variable 'ILP_neighs_j' [-Wunused-variable]
   int *ILP_neighs_i,*ILP_neighs_j;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp: In member function 'void LAMMPS_NS::PairKolmogorovCrespiFull::calc_FvdW(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:453:39: warning: unused variable 'k' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:453:41: warning: unused variable 'l' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:453:43: warning: unused variable 'kk' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:453:46: warning: unused variable 'll' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp: In member function 'void LAMMPS_NS::PairKolmogorovCrespiFull::calc_FRep(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:552:45: warning: variable 'r8inv' set but not used [-Wunused-but-set-variable]
   double rsq,r,rhosq1,exp0,exp1,r2inv,r6inv,r8inv,Tap,dTap,Vkc;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:555:21: warning: unused variable 'KC_neighs_j' [-Wunused-variable]
   int *KC_neighs_i,*KC_neighs_j;
                     ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lebedeva_z.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lebedeva_z.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lebedeva_z.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_list.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_list.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_list.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJ_AB_MDF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:305:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:309:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&aparm[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:310:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bparm[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:311:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:312:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJ_AB_MDF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:339:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:831:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:835:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:836:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:837:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shift[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:838:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:870:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:871:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:872:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:873:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:874:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:875:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:876:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJExpandCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:967:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:959:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:959:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:962:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:957:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJMDF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:313:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:317:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:318:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:319:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:320:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJMDF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:347:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:553:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:529:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:553:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:553:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:559:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:556:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:489:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:493:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:494:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:495:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:496:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:497:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&scale[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:526:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:527:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:528:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:186:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:191:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:195:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:188:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:188:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSpline::read_file(const char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:442:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:448:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:478:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSpline::SplineFunction::parse(FILE*, LAMMPS_NS::Error*, bool)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:642:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:645:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:651:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:658:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:662:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:280:25: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:279:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               rsq*rcutlj2inv+
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:272:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:270:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:29: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:272:45: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:270:46: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:37: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:272:29: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:277:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
                          ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual double LAMMPS_NS::PairLJSFDipoleSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:625:17: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:624:10: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       rsq*rcutlj2inv+
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:622:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:617:29: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += qtmp * r3inv * qpfac * pjdotr;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:615:30: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += -q[j] * r3inv * pqfac * pidotr;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:617:21: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += qtmp * r3inv * qpfac * pjdotr;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:617:37: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += qtmp * r3inv * qpfac * pjdotr;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:615:38: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += -q[j] * r3inv * pqfac * pidotr;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSWSpline::read_file(const char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:471:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSWSpline::SplineFunction::parse(FILE*, LAMMPS_NS::Error*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:603:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(line, MAXLINE, fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:609:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(line, MAXLINE, fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:615:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(line, MAXLINE, fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:619:41: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(line, MAXLINE, fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp: In member function 'virtual void LAMMPS_NS::PairMomb::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:310:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:314:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:315:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:316:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:317:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:318:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rr[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:319:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp: In member function 'virtual void LAMMPS_NS::PairMomb::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:351:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:352:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sscale,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:353:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&dscale,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:354:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:355:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSmoothLinear::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:276:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:280:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:281:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:282:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:283:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSmoothLinear::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:310:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:311:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_tersoff_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_tersoff_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_tersoff_table.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp: In member function 'virtual void LAMMPS_NS::PairSRP::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:701:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:706:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:707:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp: In member function 'virtual void LAMMPS_NS::PairSRP::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:735:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:736:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bptype,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:737:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&btype,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:738:33: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&min,sizeof(int),1,fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:739:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&midpoint,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:740:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&exclude,sizeof(int),1,fp);
                                     ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/temper_grem.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2P6::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:388:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:389:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:390:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:391:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:392:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k5[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:393:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k6[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:395:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_k[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:396:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:397:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:399:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:400:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:401:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:402:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineBuck6d::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:334:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:335:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:336:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&th0[1],sizeof(double),atom->nangletypes,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperInversionHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp:315:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kw[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp:316:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&w0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineBuck6d::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:178:47: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
         evdwl = ebuck6d - offset[itype][jtype];
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:163:33: warning: 'r32inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     fpair = forcebuck6d * r32inv;
                                 ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:417:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:421:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:422:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d2[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:423:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d3[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:424:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:425:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha_ij[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:426:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:459:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&vdwl_smooth,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:460:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:461:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:462:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:463:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:464:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/dynamical_matrix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/dynamical_matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/dynamical_matrix.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:191:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:193:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:186:51: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = ebuck6d - offset[itype][jtype];
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBuck6dCoulGaussDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:556:63: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  rsq*f_shift_ij[itype][jtype]);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:555:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:550:47: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck6d = ebuck6d - offset[itype][jtype];
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:449:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:453:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:454:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d2[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:455:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d3[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:456:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:457:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha_ij[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:458:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:492:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&vdwl_smooth,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:493:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&coul_smooth,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:494:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:495:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:496:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:497:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:498:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuck6dCoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:611:71: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:611:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:611:66: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:605:47: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck6d = ebuck6d - offset[itype][jtype];
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:210:72: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:210:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:210:77: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
                                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:204:51: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = ebuck6d - offset[itype][jtype];
                                                   ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_alloy_types.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_alloy_types.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_alloy_types.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_canonical_coloured.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_canonical_coloured.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_canonical_coloured.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp: In member function 'void LAMMPS_NS::FixPhonon::GaussJordan(int, std::complex<double>*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp:787:14: warning: 'irow' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,icol,irow,j,k,l,ll,idr,idc;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp:826:22: warning: 'icol' may be used uninitialized in this function [-Wmaybe-uninitialized]
     idr = icol*n+icol;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp: In function 'int get_neighbours(void*, size_t, size_t, int, size_t*, int32_t*, double (*)[3])':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp:189:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   if (atom_index < data->nlocal) {
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp:203:14: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (j == atom_index)
              ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_convex_hull_incremental.cpp.o
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[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_deformation_gradient.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/pair_reaxc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/pair_reaxc.cpp
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_allocate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_allocate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_allocate.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/fix_qeq_reax.cpp: In member function 'virtual void LAMMPS_NS::FixQEqReax::pre_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/fix_qeq_reax.cpp:514:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     qeq_time = t_end - t_start;
                      ^
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_bond_orders.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_bond_orders.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_bond_orders.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/pair_reaxc.cpp: In member function 'virtual void LAMMPS_NS::PairReaxC::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/pair_reaxc.cpp:547:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     data->timing.nbrs = t_end - t_start;
                               ^
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_bonds.cpp.o
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[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_control.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_control.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_control.cpp
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_forces.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_forces.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_forces.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_control.cpp: In function 'char Read_Control_File(char*, control_params*, output_controls*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_control.cpp:121:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp: In function 'char Read_Force_Field(FILE*, reax_interaction*, control_params*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:58:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:61:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:80:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAX_LINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:92:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:97:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:98:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:99:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:152:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:178:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:197:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:216:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:236:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( s, MAX_LINE, fp );
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:321:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:331:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:335:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAX_LINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:362:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAX_LINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:483:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:488:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAX_LINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:544:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:549:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAX_LINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:602:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:607:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:673:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:683:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_init_md.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_init_md.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_init_md.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_io_tools.cpp.o
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[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_nonbonded.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_nonbonded.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_nonbonded.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Tridiagonal_Solve(const double*, const double*, double*, double*, double*, unsigned int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:41:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for(i = 1; i < n; i++){
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Natural_Cubic_Spline(LAMMPS_NS::Error*, const double*, const double*, cubic_spline_coef*, unsigned int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:68:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 2; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:72:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:76:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n-2; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:80:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:87:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n; ++i ){
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Complete_Cubic_Spline(LAMMPS_NS::Error*, const double*, const double*, double, double, cubic_spline_coef*, unsigned int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:118:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n; ++i )
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:122:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n; ++i )
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:126:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 0; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:131:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:136:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n; ++i ){
                   ^
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_reset_tools.cpp.o
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[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_system_props.cpp.o
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[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_traj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_traj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_traj.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp: In function 'void* smalloc(LAMMPS_NS::Error*, rc_bigint, const char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:83:41: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
               "returning NULL.", n, name);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:83:41: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:90:79: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
     snprintf(errmsg, 256, "Failed to allocate %ld bytes for array %s", n, name);
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:90:79: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp: In function 'void* scalloc(LAMMPS_NS::Error*, rc_bigint, rc_bigint, const char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:106:42: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
             "returning NULL.\n", n, name );
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:106:42: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:113:43: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'rc_bigint {aka long long int}' [-Wformat=]
              "returning NULL", name, size );
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:113:43: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'rc_bigint {aka long long int}' [-Wformat=]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:121:84: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
     snprintf(errmsg, 256, "Failed to allocate %ld bytes for array %s", n*size, name);
                                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:121:84: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_valence_angles.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_valence_angles.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_valence_angles.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_vector.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_vector.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_vector.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_traj.cpp: In function 'int Write_Header(reax_system*, control_params*, output_controls*, mpi_datatypes*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_traj.cpp:107:79: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
     sprintf( out_control->line, BIGINT_LINE, "number_of_atoms:", system->bigN );
                                                                               ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'void LAMMPS_NS::FixRigidMeso::set_xv()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:330:50: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:329:60: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:329:50: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp: In member function 'virtual void LAMMPS_NS::FixMesoMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp:708:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp:677:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp:646:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'void LAMMPS_NS::FixRigidMeso::set_v()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:450:40: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x1 = x[i][1] + ybox*yprd + zbox*yz;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:449:50: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:449:40: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                        ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/atom_vec_meso.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/atom_vec_meso.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/atom_vec_meso.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'virtual void LAMMPS_NS::PairSMTBQ::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:434:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(ptr,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:437:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(ptr,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:488:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:492:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:500:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:509:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:527:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:541:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:564:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:567:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:620:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:632:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:654:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:667:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:674:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:694:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(ptr,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:697:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:707:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:718:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:721:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:726:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:734:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:737:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:744:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:747:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:757:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:760:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:765:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:791:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:794:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:802:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:812:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_e_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_e_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_e_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp: In constructor 'LAMMPS_NS::FixMesoMove::FixMesoMove(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp:173:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"units") == 0) {
                        ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_rho_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_rho_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_rho_atom.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_t_atom.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/fix_meso.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:693:3: warning: 'test' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (test == 0) {
   ^
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[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_heatconduction.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_heatconduction.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_heatconduction.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_idealgas.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_idealgas.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_idealgas.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'void LAMMPS_NS::PairSMTBQ::tabqeq()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:1457:70: warning: 'bCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (r > rc) {dij = aCoeff *square(r- rc-nang) *exp(bCoeff*r);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:1457:37: warning: 'aCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (r > rc) {dij = aCoeff *square(r- rc-nang) *exp(bCoeff*r);
                                     ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_lj.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_rhosum.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_rhosum.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_rhosum.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_taitwater.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_taitwater.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_taitwater.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_taitwater_morris.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_taitwater_morris.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_taitwater_morris.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'void LAMMPS_NS::PairSMTBQ::Charge()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:2593:61: warning: 'gp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     QOxInit=max(QOxInit, -0.98* params[1].qform *nQEqcall[gp]/nQEqaall[gp])   ;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:2812:24: warning: 't_init' may be used uninitialized in this function [-Wmaybe-uninitialized]
     dt = t_end - t_init;
                        ^
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY/compute_force_tally.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/dump_cfg_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/dump_cfg_uef.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/compute_pressure_uef.cpp: In member function 'virtual void LAMMPS_NS::ComputePressureUef::compute_vector()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/compute_pressure_uef.cpp:143:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
                               ^
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/fix_nh_uef.cpp.o
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[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp: In member function 'virtual void LAMMPS_NS::AngleCross::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:281:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kss[1],sizeof(double),atom->nangletypes,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:282:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kbs0[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:283:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kbs1[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:284:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r00[1],sizeof(double),atom->nangletypes,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:285:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r01[1],sizeof(double),atom->nangletypes,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:286:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp: In member function 'virtual void LAMMPS_NS::AngleMM3::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp:228:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp:229:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp: In member function 'virtual void LAMMPS_NS::BondMM3::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp:181:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp:182:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp: In member function 'virtual void LAMMPS_NS::ImproperDistHarm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp:259:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp:260:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp: In member function 'virtual void LAMMPS_NS::ImproperSQDistHarm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp:259:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp:260:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:523:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:527:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:528:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:529:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:530:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:563:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:564:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:565:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&truncw,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:566:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:567:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:568:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:569:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:570:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_data.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_data.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_data.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJSwitch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:658:19: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
     forcelj = expb*lj1[itype][jtype]*r-6.0*lj4[itype][jtype]*r6inv;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:692:36: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:675:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:666:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:666:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:669:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:664:32: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc1;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:682:7: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (r>cut_lj[itype][jtype]-truncw) {
       ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:523:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:527:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:528:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:529:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:530:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:563:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:564:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:565:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&truncw,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:566:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:567:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:568:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:569:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:570:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:193:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ecoul += prefactor2*erfc2*factor_coul;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:184:36: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc1;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:193:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ecoul += prefactor2*erfc2*factor_coul;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:189:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:211:41: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:194:24: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
           evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:201:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (r>cut_lj[itype][jtype]-truncw) {
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:186:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:186:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairMM3Switch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:677:17: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:693:36: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:677:35: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:668:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:668:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:671:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:666:32: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc1;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:683:7: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (r>cut_lj[itype][jtype]-truncw) {
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:197:23: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:196:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ecoul += prefactor2*erfc2*factor_coul;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:187:36: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc1;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:196:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ecoul += prefactor2*erfc2*factor_coul;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:192:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:213:41: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:197:41: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:203:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (r>cut_lj[itype][jtype]-truncw) {
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:189:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:189:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_omp.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_omp.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_sphere_omp.cpp.o
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[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/domain_omp.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_expand_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_expand_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_expand_omp.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_gromos_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_gromos_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_gromos_omp.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_omp.cpp: In member function 'void LAMMPS_NS::BondFENEOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_omp.cpp:140:9: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_omp.cpp: In member function 'void LAMMPS_NS::BondFENEOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_omp.cpp:140:9: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'void LAMMPS_NS::BondFENEExpandOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_expand_omp.cpp:144:9: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'void LAMMPS_NS::BondFENEExpandOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_expand_omp.cpp:144:9: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_morse_omp.cpp
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_nonlinear_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_nonlinear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_nonlinear_omp.cpp
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_table_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp: In member function 'void LAMMPS_NS::BondQuarticOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp:152:26: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (rsq < TWO_1_3) ebond += 4.0*sr6*(sr6-1.0) + 1.0;
                          ^
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp: In member function 'void LAMMPS_NS::BondQuarticOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp:152:26: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp.o
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[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/dihedral_multi_harmonic_omp.cpp.o
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[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/dihedral_table_omp.cpp.o
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[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_class2_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:498:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:493:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:477:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:498:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:493:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:477:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:498:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:493:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:477:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:498:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:493:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:477:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp: In member function 'virtual void LAMMPS_NS::FixQEqReaxOMP::pre_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp:347:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     qeq_time = t_end - t_start;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:675:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:662:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:675:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:662:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:675:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:662:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:437:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:432:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:417:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:437:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:432:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:417:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:437:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:432:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:417:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:437:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:432:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:417:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:611:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:598:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:611:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:598:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:611:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:598:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_harmonic_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_umbrella_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_umbrella_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_umbrella_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       pd = -pd;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:235:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
       p = 2.0 - p;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       pd = -pd;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:235:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
       p = 2.0 - p;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       pd = -pd;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cossq_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cossq_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cossq_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_fourier_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_fourier_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_fourier_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_ring_omp.cpp.o
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[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/respa_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pppm_tip4p_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pppm_tip4p_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pppm_tip4p_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:112:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:48:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:110:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:47:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:110:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:47:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:118:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:116:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:49:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:116:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:49:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:120:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:49:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:118:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:48:46: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:118:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:48:41: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                         ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:112:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:110:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:49:36: note: 'iatom' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:110:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:49:31: note: 'imol' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                               ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:112:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:110:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:49:36: note: 'iatom' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:110:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:49:31: note: 'imol' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                               ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:117:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:115:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:49:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:115:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:49:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:126:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:124:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:53:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:124:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:53:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:118:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:49:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:147:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:48:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:147:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:48:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:123:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:121:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:48:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:121:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:48:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:124:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:122:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:50:46: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:122:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:50:41: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                         ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:120:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:155:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:49:46: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:155:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:49:41: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:133:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:131:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:50:46: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:131:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:50:41: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                         ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:113:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:111:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:51:36: note: 'iatom' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:111:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:51:31: note: 'imol' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                               ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:121:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:119:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:54:36: note: 'iatom' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:119:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:54:31: note: 'imol' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                               ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:131:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:129:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:50:46: note: 'iatom' was declared here
   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:129:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:50:41: note: 'imol' was declared here
   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:148:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:146:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:54:54: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:146:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:54:49: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:165:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (which == 0) neighptr_middle[n_middle++] = j;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:54:40: note: 'n_middle' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:190:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:57:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:94:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:81:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:81:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:81:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:150:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:192:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:53:54: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:192:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:53:49: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:166:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (which == 0) neighptr_middle[n_middle++] = j;
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:53:40: note: 'n_middle' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:236:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:56:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:93:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:80:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:80:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:80:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:155:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:153:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:53:54: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:153:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:53:49: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:172:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (which == 0) neighptr_middle[n_middle++] = j;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:53:40: note: 'n_middle' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:197:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:56:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:93:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:80:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:80:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:80:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:145:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:143:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:55:47: note: 'iatom' was declared here
   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:143:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:55:42: note: 'imol' was declared here
   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:160:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (which == 0) neighptr_middle[n_middle++] = j;
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:55:33: note: 'n_middle' was declared here
   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:184:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:58:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:22:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:97:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:84:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:84:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:84:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:163:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:161:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:56:57: note: 'iatom' was declared here
   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:161:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:56:52: note: 'imol' was declared here
   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:179:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (which == 0) neighptr_middle[n_middle++] = j;
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:56:43: note: 'n_middle' was declared here
   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:203:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:59:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:22:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:98:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:85:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:85:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:85:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:177:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:177:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
             ^
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_debye_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_debye_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_dsf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_dsf_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_wolf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_wolf_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_dpd_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_dpd_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_dpd_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_dpd_tstat_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp:147:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = epsilon[itype][jtype]*
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp:145:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp:147:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = epsilon[itype][jtype]*
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp:145:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:154:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:154:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_expand_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_expand_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_expand_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:160:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:160:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:13: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:174:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:13: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:174:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:180:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:180:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp:146:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp:146:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:13: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:13: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_soft_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_ufm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_ufm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_ufm_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a * tb->e[itable] + b * tb->e[itable+1] +
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:185:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a * tb->e[itable] + b * tb->e[itable+1] +
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:185:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
             ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gayberne_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gayberne_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gayberne_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_resquared_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_resquared_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_resquared_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp:146:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp:146:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_poly_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_poly_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:170:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:171:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:170:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:171:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:211:19: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (EVFLAG) ev_tally_thr(this, i,j,nlocal,NEWTON_PAIR,
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:204:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       fztmp += delz*fpair;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:211:19: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (EVFLAG) ev_tally_thr(this, i,j,nlocal,NEWTON_PAIR,
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:204:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       fztmp += delz*fpair;
       ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_poly_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_poly_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:204:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:204:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:259:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:259:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hooke_omp.cpp.o
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[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:179:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:176:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:179:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:176:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:174:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:174:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                    ^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:186:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:191:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:195:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:186:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:191:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:195:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:181:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:190:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:181:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:190:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:454:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:466:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:466:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:454:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:454:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:454:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:443:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:443:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_adp_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_adp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_adp_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_inner(int, int, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1335:28: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1331:28: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1304:28: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1300:28: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_middle(int, int, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1597:28: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1593:28: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1566:28: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1562:28: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::TORSION_thr(int, int, int, int, double*, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:999:77: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ev_tally4_thr(this,i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl,thr);
                                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::FLJ_thr(int, int, int, int, int, double*, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:569:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair = dC*dwij / rij;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:613:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:608:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:608:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:613:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:584:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:580:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkjS / rikS;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:603:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:608:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:613:45: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:608:45: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:584:40: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:603:45: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:639:84: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
             v_tally4_thr(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS,thr);
                                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:639:84: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_morse_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_comb_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_comb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_comb_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_omp.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyOMP::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:187:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:200:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair += D_i * rhojp * t1;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSOMP::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:189:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:205:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eim_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eim_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eim_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_rebo_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_rebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_rebo_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_sw_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_sw_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_sw_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o
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[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_vashishta_omp.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:391:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:420:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_lps_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_lps_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_lps_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:391:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:420:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:391:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:420:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:391:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:420:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:375:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:371:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:404:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:400:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_pmb_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_pmb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_pmb_omp.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (drudetype[type[i]] != NOPOL_TYPE &&
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:15: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:15: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = qi*qj * table;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:15: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:241:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:252:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:241:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (drudetype[type[i]] != NOPOL_TYPE &&
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:15: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:15: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = qi*qj * table;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:15: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:241:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:252:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:241:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j != di_closest){
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j != di_closest){
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j != di_closest){
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j != di_closest){
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:157:13: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = lj1[itype][jtype] * 4.0 * epsilon[itype][jtype] *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:154:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:157:13: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = lj1[itype][jtype] * 4.0 * epsilon[itype][jtype] *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:154:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:179:13: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = lj1[itype][jtype] * 4.0 * epsilon[itype][jtype] *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:173:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:179:13: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = lj1[itype][jtype] * 4.0 * epsilon[itype][jtype] *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:173:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:435:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:406:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:435:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:406:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:435:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:406:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp: In member function 'void LAMMPS_NS::PairAGNIOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp:159:17: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (EVFLAG) ev_tally_xyz_full_thr(this,i,0.0,0.0,
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp:159:17: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp:159:17: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:435:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_diel_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_diel_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_diel_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:406:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:419:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:415:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:390:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:386:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_edip_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_edip_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_edip_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gauss_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gauss_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gauss_cut_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_meam_spline_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_meam_spline_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_meam_spline_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
             ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_table_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_asphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_asphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_asphere_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp: In member function 'virtual void LAMMPS_NS::PairReaxCOMP::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp:223:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     data->timing.nbrs = t_end - t_start;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bond_orders_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bond_orders_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bond_orders_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_nonbonded_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_nonbonded_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_nonbonded_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bonds_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bonds_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bonds_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:780:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:775:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:759:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:780:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:775:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:759:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:780:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:775:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:759:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:780:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:775:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:759:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:957:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:944:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:957:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:944:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:957:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:944:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_forces_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_forces_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_forces_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp: In function 'int Init_ListsOMP(reax_system*, control_params*, simulation_data*, storage*, reax_list**, mpi_datatypes*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp:54:12: warning: variable 'comm' set but not used [-Wunused-but-set-variable]
   MPI_Comm comm;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_multi_body_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_multi_body_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_multi_body_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_valence_angles_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_valence_angles_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_valence_angles_omp.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_opt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_morse_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_morse_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_morse_opt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_ufm_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_ufm_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_ufm_opt.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 ecoul = prefactor*erfc;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = etable[itable] + fraction*detable[itable];
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 ecoul = prefactor*erfc;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = etable[itable] + fraction*detable[itable];
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_long_coul_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_long_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_long_coul_long_opt.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_opt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:437:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:437:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_alloy_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_alloy_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_alloy_opt.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_fs_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_fs_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_fs_opt.cpp
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[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pppm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pppm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pppm_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_beck_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_beck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_beck_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_gpu.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_beck_gpu.cpp: In member function 'void LAMMPS_NS::PairBeckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_beck_gpu.cpp:240:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_gpu.cpp: In member function 'void LAMMPS_NS::PairBornGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_gpu.cpp:242:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp:281:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp:278:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp:278:72: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp:282:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp:237:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_debye_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_debye_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp:249:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp:249:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_dsf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_dsf_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_tstat_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_tstat_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_tstat_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp: In member function 'void LAMMPS_NS::PairDPDGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp:405:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp: In member function 'void LAMMPS_NS::PairGaussGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp:230:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJ96CutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp:226:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCubicGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp:234:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp:231:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp:236:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp:248:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:252:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:252:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:255:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:282:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:283:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:269:28: warning: 'forcecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:276:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:282:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp:239:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp: In member function 'void LAMMPS_NS::PairLJGromacsGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp:235:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp:241:74: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
               if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                          ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairMIECutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp:225:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp: In member function 'void LAMMPS_NS::PairMorseGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp:221:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp: In member function 'void LAMMPS_NS::PairSoftGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp:232:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp: In member function 'void LAMMPS_NS::PairTableGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp:333:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp:333:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp:330:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp:338:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp: In member function 'void LAMMPS_NS::PairUFMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp:235:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp:224:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp: In member function 'void LAMMPS_NS::PairZBLGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp:232:59: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp:237:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp: In member function 'void LAMMPS_NS::PairGayBerneGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp:335:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp:338:63: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                       -r12[0],-r12[1],-r12[2]);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp: In member function 'void LAMMPS_NS::PairRESquaredGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp:310:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp:313:73: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                       fforce[2],-r12[0],-r12[1],-r12[2]);
                                                                         ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2GPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_gpu.cpp:223:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:272:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:273:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:276:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:276:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp:302:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       f[i][2] += delz*fpair;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp:298:36: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (eflag) evdwl *= factor_lj;
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp:235:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:325:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:326:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:330:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:329:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:284:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:281:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:281:72: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:285:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp:306:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp:311:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp:308:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp:308:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:353:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:351:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:349:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:349:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:353:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:358:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:70: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:54: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:47: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:31: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:70: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:54: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:417:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp:282:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp:283:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp:287:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp:286:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp.o
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp:274:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp:275:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp:279:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp:279:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp:281:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp:286:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp:283:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp:283:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:317:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:322:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:326:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:326:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:305:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:310:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:314:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:307:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:307:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:283:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:278:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:287:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'ecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,ecoul,fpair,delx,dely,delz);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_sw_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_sw_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_sw_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSGPU::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:376:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:377:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:378:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:379:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:404:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:426:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyGPU::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp:433:55: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (me == 0) grab(fptr,file->nr,&file->rhor[i][1]);
                                                       ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:442:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_mod_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_mod_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_mod_gpu.cpp
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_zbl_gpu.cpp.o
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[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_vashishta_gpu.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:311:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:316:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:320:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:313:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:313:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:388:25: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:387:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               rsq*rcutlj2inv +
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:380:35: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv * qpfac * pjdotr;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:378:36: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv * pqfac * pidotr;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:29: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:380:43: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv * qpfac * pjdotr;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:378:44: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv * pqfac * pidotr;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:37: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:380:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv * qpfac * pjdotr;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:385:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) +
                          ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/mpich-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/mpich/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/main.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/main.cpp
[100%] Linking CXX executable lmp_mpich
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/lmp.dir/link.txt --verbose=1
/usr/bin/c++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp  -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/mpich/lib -Wl,--enable-new-dtags -rdynamic CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/main.cpp.o  -o lmp_mpich -Wl,-rpath,/builddir/build/BUILD/lammps-stable_7Aug2019/mpich:/usr/lib/mpich/lib: liblammps_mpich.so.0 /usr/lib/mpich/lib/libmpichcxx.so /usr/lib/mpich/lib/libmpich.so /usr/lib/mpich/lib/libopa.so /usr/lib/mpich/lib/libmpl.so -lrt -lpthread -ljpeg -lpng -lfftw3 -lpython3.6m -lvoro++ -lkim-api libcsmpi.a -lm libpoems.a libatc.a -lopenblas libcolvars.a libh5md.a -lhdf5 -lsz -lz -ldl -lm libgpu.a -lOpenCL 
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
[100%] Built target lmp
make[1]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
/usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/CMakeFiles 0
~/build/BUILD/lammps-stable_7Aug2019
+ popd
+ test -n mpich
+ module unload mpi/mpich-arm
++ /usr/bin/modulecmd sh unload mpi/mpich-arm
+ eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;'
++ MANPATH=/usr/share/man:/usr/local/share/man
++ export MANPATH
++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ PKG_CONFIG_PATH=/usr/lib/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset LD_LIBRARY_PATH
++ unset LOADEDMODULES
++ unset MPI_BIN
++ unset MPI_COMPILER
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset MPI_INCLUDE
++ unset MPI_LIB
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ unset PYTHONPATH
++ unset _LMFILES_
+ for mpi in ''\'''\''' mpich openmpi openmpi3
+ test -n openmpi
+ module load mpi/openmpi-arm
++ /usr/bin/modulecmd sh load mpi/openmpi-arm
+ eval LD_LIBRARY_PATH=/usr/lib/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi-arm' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-arm:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-arm' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi-arm' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-arm' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-arm' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-arm' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi-arm' ';export' '_LMFILES_;'
++ LD_LIBRARY_PATH=/usr/lib/openmpi/lib
++ export LD_LIBRARY_PATH
++ LOADEDMODULES=mpi/openmpi-arm
++ export LOADEDMODULES
++ MANPATH=/usr/share/man/openmpi-arm:/usr/share/man:/usr/local/share/man
++ export MANPATH
++ MPI_BIN=/usr/lib/openmpi/bin
++ export MPI_BIN
++ MPI_COMPILER=openmpi-arm
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi-arm
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib/openmpi
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/openmpi-arm
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib/openmpi/lib
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/openmpi-arm
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi
++ export MPI_PYTHON_SITEARCH
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi-arm
++ export MPI_SYSCONFIG
~/build/BUILD/lammps-stable_7Aug2019/openmpi ~/build/BUILD/lammps-stable_7Aug2019
++ PATH=/usr/lib/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi
++ export PYTHONPATH
++ _LMFILES_=/etc/modulefiles/mpi/openmpi-arm
++ export _LMFILES_
+ mkdir -p openmpi
+ pushd openmpi
+ cp -al ../lammps-testing-d0394a77fa2b4b2d545a73ea092cf6de7616aac8 tests/
+ CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ export CFLAGS
+ CXXFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ export CXXFLAGS
+ FFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro '
+ export LDFLAGS
++ test -z openmpi
+ /usr/bin/cmake3 -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DBUILD_SHARED_LIBS:BOOL=ON -C ../cmake/presets/all_on.cmake -C ../cmake/presets/nolib.cmake -DBUILD_LIB=ON -DPKG_PYTHON=ON -DPKG_VORONOI=ON -DPKG_USER-ATC=ON -DPKG_USER-H5MD=ON -DPKG_KIM=ON -DBUILD_TOOLS=ON -DENABLE_TESTING=ON -DPYTHON_INSTDIR=/usr/lib/python3.6/site-packages -DCMAKE_INSTALL_SYSCONFDIR=/etc -DPKG_GPU=ON -DGPU_API=OpenCL -DBUILD_OMP=ON -DFFT=FFTW3 -DPKG_USER-INTEL=OFF -DCMAKE_INSTALL_BINDIR=/usr/lib/openmpi/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib/openmpi/lib -DLAMMPS_MACHINE=openmpi -DLAMMPS_LIB_SUFFIX=openmpi -DCMAKE_INSTALL_MANDIR=/usr/share/man/openmpi-arm -DBUILD_MPI=ON -DPKG_MPIIO=ON '-DCMAKE_EXE_LINKER_FLAGS=-Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/openmpi/lib -Wl,--enable-new-dtags' '-DCMAKE_SHARED_LINKER_FLAGS=-Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/openmpi/lib -Wl,--enable-new-dtags' -DLAMMPS_TESTING_SOURCE_DIR=/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/tests ../cmake
loading initial cache file ../cmake/presets/all_on.cmake
loading initial cache file ../cmake/presets/nolib.cmake
-- The CXX compiler identification is GNU 4.8.5
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Could NOT find Git (missing: GIT_EXECUTABLE) 
-- Running check for auto-generated files from make-based build system
-- Found MPI_CXX: /usr/lib/openmpi/lib/libmpi_cxx.so (found version "3.0") 
-- Found MPI: TRUE (found version "3.0")  
-- Found OpenMP_CXX: -fopenmp (found version "3.1") 
-- Found OpenMP: TRUE (found version "3.1")  
-- Looking for C++ include omp.h
-- Looking for C++ include omp.h - found
-- Looking for sgemm_
-- Looking for sgemm_ - not found
-- Looking for C++ include pthread.h
-- Looking for C++ include pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - found
-- Found Threads: TRUE  
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- Found BLAS: /usr/lib/libopenblas.so  
-- Looking for cheev_
-- Looking for cheev_ - found
-- A library with LAPACK API found.
-- Found JPEG: /usr/lib/libjpeg.so (found version "62") 
-- Found PNG: /usr/lib/libpng.so (found version "1.5.13") 
-- Found ZLIB: /usr/lib/libz.so (found version "1.2.7") 
-- Found GZIP: /usr/bin/gzip  
-- Could NOT find FFMPEG (missing: FFMPEG_EXECUTABLE) 
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.27.1") 
-- Checking for module 'fftw3'
--   Found fftw3, version 3.3.3
-- Found FFTW3: /usr/lib/libfftw3.so  
-- Found PythonLibs: /usr/lib/libpython3.6m.so (found version "3.6.8") 
-- Found VORO: /usr/lib/libvoro++.so  
-- Could NOT find CURL (missing: CURL_LIBRARY CURL_INCLUDE_DIR) 
-- Checking for module 'libkim-api>=2.0'
--   Found libkim-api, version 2.1.3
-- Found KIM-API: kim-api  
-- Looking for C++ include cmath
-- Looking for C++ include cmath - found
-- The C compiler identification is GNU 4.8.5
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- HDF5: Using hdf5 compiler wrapper to determine C configuration
-- Found HDF5: /usr/lib/libhdf5.so;/usr/lib/libsz.so;/usr/lib/libz.so;/usr/lib/libdl.so;/usr/lib/libm.so (found version "1.8.12")  
-- Looking for CL_VERSION_2_2
-- Looking for CL_VERSION_2_2 - found
-- Found OpenCL: /usr/lib/libOpenCL.so (found version "2.2") 
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/atom_cl.h...
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Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/born_coul_wolf_cl.h...
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Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/coul_long_cs_cl.h...
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Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/eam_cl.h...
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Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/lj96_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/lj_class2_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/lj_coul_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/lj_coul_debye_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/lj_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/lj_coul_msm_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/lj_cubic_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/lj_dsf_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/lj_expand_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/lj_expand_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/lj_gromacs_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/lj_sdk_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/lj_sdk_long_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/mie_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/morse_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/neighbor_cpu_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/neighbor_gpu_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/pppm_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/soft_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/sw_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/table_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/ufm_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/vashishta_cl.h...
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Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/yukawa_colloid_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/zbl_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/gayberne_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/gayberne_lj_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/re_squared_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/re_squared_lj_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/tersoff_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/tersoff_zbl_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu/tersoff_mod_cl.h...
-- Generating style_angle.h...
-- Generating style_atom.h...
-- Generating style_body.h...
-- Generating style_bond.h...
-- Generating style_command.h...
-- Generating style_compute.h...
-- Generating style_dihedral.h...
-- Generating style_dump.h...
-- Generating style_fix.h...
-- Generating style_improper.h...
-- Generating style_integrate.h...
-- Generating style_kspace.h...
-- Generating style_minimize.h...
-- Generating style_nbin.h...
-- Generating style_npair.h...
-- Generating style_nstencil.h...
-- Generating style_ntopo.h...
-- Generating style_pair.h...
-- Generating style_reader.h...
-- Generating style_region.h...
-- Generating packages_angle.h...
-- Generating packages_atom.h...
-- Generating packages_body.h...
-- Generating packages_bond.h...
-- Generating packages_command.h...
-- Generating packages_compute.h...
-- Generating packages_dihedral.h...
-- Generating packages_dump.h...
-- Generating packages_fix.h...
-- Generating packages_improper.h...
-- Generating packages_integrate.h...
-- Generating packages_kspace.h...
-- Generating packages_minimize.h...
-- Generating packages_nbin.h...
-- Generating packages_npair.h...
-- Generating packages_nstencil.h...
-- Generating packages_ntopo.h...
-- Generating packages_pair.h...
-- Generating packages_reader.h...
-- Generating packages_region.h...
-- Generating lmpinstalledpkgs.h...
-- Skipping building 'chain.x' with Ninja build tool due to lack of Fortran support
-- The Fortran compiler identification is GNU 4.8.5
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran  -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Found PythonInterp: /usr/bin/python3.6 (found version "3.6.8") 
-- Running test discovery...
-- Found 53 tests.
-- Building package: ASPHERE
-- Building package: BODY
-- Building package: CLASS2
-- Building package: COLLOID
-- Building package: CORESHELL
-- Building package: DIPOLE
-- Building package: GRANULAR
-- Building package: KSPACE
-- Building package: MANYBODY
-- Building package: MC
-- Building package: MESSAGE
-- Building package: MISC
-- Building package: MOLECULE
-- Building package: PERI
-- Building package: POEMS
-- Building package: QEQ
-- Building package: REPLICA
-- Building package: RIGID
-- Building package: SHOCK
-- Building package: SPIN
-- Building package: SNAP
-- Building package: SRD
-- Building package: KIM
-- Building package: PYTHON
-- Building package: MPIIO
-- Building package: VORONOI
-- Building package: USER-ATC
-- Building package: USER-BOCS
-- Building package: USER-CGDNA
-- Building package: USER-MESO
-- Building package: USER-CGSDK
-- Building package: USER-COLVARS
-- Building package: USER-DIFFRACTION
-- Building package: USER-DPD
-- Building package: USER-DRUDE
-- Building package: USER-EFF
-- Building package: USER-FEP
-- Building package: USER-H5MD
-- Building package: USER-MANIFOLD
-- Building package: USER-MEAMC
-- Building package: USER-MGPT
-- Building package: USER-MISC
-- Building package: USER-MOFFF
-- Building package: USER-PHONON
-- Building package: USER-PTM
-- Building package: USER-QTB
-- Building package: USER-REAXC
-- Building package: USER-SDPD
-- Building package: USER-SMTBQ
-- Building package: USER-SPH
-- Building package: USER-TALLY
-- Building package: USER-UEF
-- Building package: USER-YAFF
-- Building package: USER-OMP
-- Building package: OPT
-- Building package: GPU
-- The following packages have been found:
 * MPI
 * OpenMP
 * LAPACK
 * Threads
 * BLAS
 * JPEG
 * PNG
 * ZLIB
 * FFTW3
 * PythonLibs
 * VORO
 * PkgConfig
 * KIM-API
 * HDF5
 * OpenCL
 * PythonInterp
-- <<< Build configuration >>>
   Build type       
   Install path     /usr
   Compilers and Flags:
   C++ Compiler     /usr/bin/c++
       Type         GNU
       Version      4.8.5
   C++ Flags        -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp 
   Defines          LAMMPS_SMALLBIG;LAMMPS_MEMALIGN=64;LAMMPS_JPEG;LAMMPS_PNG;LAMMPS_GZIP;FFT_FFTW3;LMP_PYTHON;LMP_MPIIO;LMP_USER_OMP
-- Fortran Compiler /usr/bin/gfortran
           Type     GNU
           Version  4.8.5
   Fortran Flags    -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules 
-- C Compiler /usr/bin/cc
     Type     GNU
     Version  4.8.5
     C Flags    
-- Linker flags:
   Executable      -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/openmpi/lib -Wl,--enable-new-dtags
-- Shared libraries  -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/openmpi/lib -Wl,--enable-new-dtags
-- Link libraries: /usr/lib/openmpi/lib/libmpi_cxx.so;/usr/lib/openmpi/lib/libmpi.so;/usr/lib/libjpeg.so;/usr/lib/libpng.so;/usr/lib/libz.so;/usr/lib/libfftw3.so;/usr/lib/libpython3.6m.so;/usr/lib/libvoro++.so;-lkim-api;cslib;m;poems;atc;colvars;h5md;gpu
-- Using mpi with headers in /usr/include/openmpi-arm and /usr/lib/openmpi/lib/libmpi_cxx.so;/usr/lib/openmpi/lib/libmpi.so
-- GPU Api: OPENCL
-- OCL Tune: GENERIC
-- GPU Precision: MIXED
-- Using FFTW3 as primary FFT library
-- Using double precision FFTs
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:
    CMAKE_CXX_FLAGS_RELEASE
    CMAKE_C_FLAGS_RELEASE
    CMAKE_Fortran_FLAGS_RELEASE
    INCLUDE_INSTALL_DIR
    LIB_INSTALL_DIR
    SHARE_INSTALL_PREFIX
    SYSCONF_INSTALL_DIR
-- Build files have been written to: /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi
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/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:318.14:
      iseed = sseed                                                     
              1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:97.15:
          x2 = xboundlo + random(iseed)*xprd                            
               1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:98.15:
          y2 = yboundlo + random(iseed)*yprd                            
               1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:99.15:
          z2 = zboundlo + random(iseed)*zprd                            
               1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:132.21:
 10         xinner = 2.0*random(iseed) - 1.0                            
                     1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:133.21:
            yinner = 2.0*random(iseed) - 1.0                            
                     1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:134.21:
            zinner = 2.0*random(iseed) - 1.0                            
                     1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:147.17:
            x2 = x1 + xsurf*bondlength(iset)                            
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Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
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            y2 = y1 + ysurf*bondlength(iset)                            
                 1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:149.17:
            z2 = z1 + zsurf*bondlength(iset)                            
                 1
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/usr/bin/cc -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/WriteDataFile.c.o   -c /builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/WriteDataFile.c
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/cslib.cpp: In member function 'void CSLIB_NS::CSlib::onefield(int, int, int&, int&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/cslib.cpp:649:26: warning: 'bigbytes' may be used uninitialized in this function [-Wmaybe-uninitialized]
   nbytes = (int) bigbytes;
                          ^
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cd /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/CMakeFiles/gitversion.dir/DependInfo.cmake --color=
Scanning dependencies of target gitversion
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi'
/usr/bin/make -f CMakeFiles/gitversion.dir/build.make CMakeFiles/gitversion.dir/build
/usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi'
/usr/bin/cmake3 -DCMAKE_CURRENT_SOURCE_DIR="/builddir/build/BUILD/lammps-stable_7Aug2019/cmake" -DGIT_EXECUTABLE="GIT_EXECUTABLE-NOTFOUND" -DGIT_FOUND="FALSE" -DLAMMPS_STYLE_HEADERS_DIR="/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles" -P /builddir/build/BUILD/lammps-stable_7Aug2019/cmake/Modules/generate_lmpgitversion.cmake
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/CMakeFiles/atc.dir/DependInfo.cmake --color=
-- Generating lmpgitversion.h...
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi'
[  1%] Built target gitversion
[  1%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvaratoms.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvaratoms.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvaratoms.cpp
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_YES -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp: In member function 'virtual void CSLIB_NS::MsgFile::recv(int&, int*&, int&, char*&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp:125:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(lengths,sizeof(int),2,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp:132:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(header,sizeof(int),nheader,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp:135:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(buf,1,nbuf,fp);
                                    ^
[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_one.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_YES -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_one.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_one.cpp
Scanning dependencies of target atc
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi'
/usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi'
[  1%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Coupling.cpp.o
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[  2%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_two.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_YES -DZMQ_NO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/STUBS_ZMQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_two.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_two.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_two.cpp: In member function 'void CSLIB_NS::MsgMPITwo::init(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_two.cpp:60:39: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(port,MPI_MAX_PORT_NAME,fp);
                                       ^
[  2%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_zmq.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp
[  2%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/body23joint.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/body23joint.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/body23joint.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:182:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (_ef_atom)
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:196:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
       if (_vf_atom)
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:231:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (_ef_atom)
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:250:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
       if (_vf_atom)
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp: In instantiation of 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:313:16:   required from here
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:224:7: warning: unused variable 'ii' [-Wunused-variable]
   int ii, vstart=0, iend=_inum;
       ^
[  2%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/colmatmap.cpp.o
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In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  2%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/fastmatrixops.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/fastmatrixops.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/fastmatrixops.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Coupling.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[  2%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/fixedpoint.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/fixedpoint.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/fixedpoint.cpp
[  2%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/freebodyjoint.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/freebodyjoint.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/freebodyjoint.cpp
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[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/inertialframe.cpp.o
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In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/joint.cpp.o
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[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/mixedjoint.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/mixedjoint.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/mixedjoint.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.cpp:17:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/norm.cpp.o
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[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemsobject.cpp.o
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[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.cpp.o
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In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.h: In constructor 'TreeNode::TreeNode(const int&, TreeNode*, TreeNode*, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.h:36:6: warning: 'TreeNode::data' will be initialized after [-Wreorder]
  int data;
      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.h:32:12: warning:   'TreeNode* TreeNode::left' [-Wreorder]
  TreeNode *left;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.cpp:22:1: warning:   when initialized here [-Wreorder]
 TreeNode::TreeNode (const int & item, TreeNode *lptr,TreeNode *rptr,
 ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/point.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/point.cpp
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.cpp.o
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[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/prismaticjoint.cpp.o
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[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/revolutejoint.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/revolutejoint.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/revolutejoint.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.cpp:17:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/rigidbody.cpp.o
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In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dpd.cpp:17:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
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In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_meta.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_meta.cpp
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_restraint.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_restraint.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_restraint.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentum.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentum.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.cpp
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.cpp
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.cpp
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_angles.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_angles.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_angles.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.cpp
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_coordnums.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_coordnums.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_coordnums.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color=
Scanning dependencies of target ocl_get_devices
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi'
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi'
[  6%] Building CXX object CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DUCL_OPENCL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs_ext.cpp
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp:25:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_ext.cpp
[  7%] Linking CXX executable ocl_get_devices
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/ocl_get_devices.dir/link.txt --verbose=1
/usr/bin/c++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp  -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/openmpi/lib -Wl,--enable-new-dtags -rdynamic CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp.o  -o ocl_get_devices -lOpenCL 
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi'
[  7%] Built target ocl_get_devices
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_distances.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_distances.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_distances.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_gpath.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_gpath.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_gpath.cpp
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_protein.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_protein.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_protein.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_rotations.cpp.o
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[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_ext.cpp.o
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/usr/bin/make -f CMakeFiles/binary2txt.dir/build.make CMakeFiles/binary2txt.dir/depend
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Scanning dependencies of target binary2txt
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make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi'
[  7%] Building CXX object CMakeFiles/binary2txt.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/binary2txt.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp: In function 'int main(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:97:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&ntimestep,sizeof(bigint),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:107:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&natoms,sizeof(bigint),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:108:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&triclinic,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:109:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&boundary[0][0],6*sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:110:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&xlo,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:111:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&xhi,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:112:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&ylo,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:113:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&yhi,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:114:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&zlo,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:115:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&zhi,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:117:32: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(&xy,sizeof(double),1,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:118:32: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(&xz,sizeof(double),1,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:119:32: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(&yz,sizeof(double),1,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:121:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&size_one,sizeof(int),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:122:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&nchunk,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:159:28: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(&n,sizeof(int),1,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:171:32: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(buf,sizeof(double),n,fp);
                                ^
[  7%] Linking CXX executable binary2txt
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/binary2txt.dir/link.txt --verbose=1
/usr/bin/c++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp  -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/openmpi/lib -Wl,--enable-new-dtags -rdynamic CMakeFiles/binary2txt.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp.o  -o binary2txt 
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi'
[  7%] Built target binary2txt
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvardeps.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvardeps.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvardeps.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvargrid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvargrid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvargrid.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarmodule.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarmodule.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarmodule.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_ext.cpp
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarparse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarparse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarparse.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long_ext.cpp
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarproxy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarproxy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarproxy.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferPartitionOfUnity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferPartitionOfUnity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferPartitionOfUnity.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid_ext.cpp
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarscript.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarscript.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarscript.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvartypes.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvartypes.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvartypes.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferPartitionOfUnity.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye_ext.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.cpp
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomToMoleculeTransfer.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomToMoleculeTransfer.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomToMoleculeTransfer.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarvalue.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarvalue.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarvalue.cpp
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/BodyForce.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/BodyForce.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/BodyForce.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.cpp
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp: In member function 'void Lepton::CompiledExpression::compileExpression(const Lepton::ExpressionTreeNode&, std::vector<std::pair<Lepton::ExpressionTreeNode, int> >&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:91:49: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i = 0; i < node.getChildren().size(); i++) {
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:113:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             for (int i = 1; i < args.size(); i++)
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp: In member function 'double Lepton::CompiledExpression::evaluate() const':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:170:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i = 0; i < variablesToCopy.size(); i++)
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:175:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int step = 0; step < operation.size(); step++) {
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:180:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             for (int i = 0; i < args.size(); i++)
                                           ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs_ext.cpp
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionProgram.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CBLattice.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CBLattice.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CBLattice.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_ext.cpp
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Operation.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Operation.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Operation.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const std::vector<Lepton::ExpressionTreeNode>&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:40:55: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (operation->getNumArguments() != children.size())
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&, const Lepton::ExpressionTreeNode&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:47:55: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (operation->getNumArguments() != children.size())
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:53:55: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (operation->getNumArguments() != children.size())
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:58:55: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (operation->getNumArguments() != children.size())
                                                       ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.cpp
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CauchyBorn.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CauchyBorn.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CauchyBorn.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CbPotential.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CbPotential.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CbPotential.cpp
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ParsedExpression.cpp.o
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[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ConcentrationRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ConcentrationRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ConcentrationRegulator.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ParsedExpression Lepton::Parser::parse(const string&, const std::map<std::basic_string<char>, Lepton::CustomFunction*>&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:181:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             if (pos != tokens.size())
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:190:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         if (pos != tokens.size())
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ExpressionTreeNode Lepton::Parser::parsePrecedence(const std::vector<Lepton::ParseToken>&, int&, const std::map<std::basic_string<char>, Lepton::CustomFunction*>&, const std::map<std::basic_string<char>, Lepton::ExpressionTreeNode>&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:201:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (pos == tokens.size())
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:227:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:241:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
                                ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Linking CXX static library libcolvars.a
/usr/bin/cmake3 -P CMakeFiles/colvars.dir/cmake_clean_target.cmake
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/colvars.dir/link.txt --verbose=1
/usr/bin/ar qc libcolvars.a  CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvar.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvaratoms.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_abf.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_alb.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_histogram.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_meta.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_restraint.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_angles.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_coordnums.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_distances.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_gpath.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_protein.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_rotations.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvardeps.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvargrid.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarmodule.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarparse.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarproxy.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarscript.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvartypes.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarvalue.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Operation.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ParsedExpression.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp.o
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.cpp
/usr/bin/ranlib libcolvars.a
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi'
[ 10%] Built target colvars
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ChargeRegulator.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ChargeRegulator.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronChargeDensity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronChargeDensity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronChargeDensity.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.cpp
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronDragPower.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronDragPower.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronDragPower.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj_ext.cpp
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronFlux.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronFlux.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatCapacity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatCapacity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatCapacity.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatFlux.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatFlux.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd_ext.cpp
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronPhononExchange.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronPhononExchange.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronPhononExchange.cpp
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp: In instantiation of 'void LAMMPS_AL::EAM<numtyp, acctyp>::loop(bool, bool) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp:533:16:   required from here
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp:448:14: warning: variable 'vflag' set but not used [-Wunused-but-set-variable]
   int eflag, vflag;
              ^
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_alloy_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_alloy_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_alloy_ext.cpp
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_alloy_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_fs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_fs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_fs_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_fs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss_ext.cpp
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Element.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Element.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Element.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.cpp:27:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.cpp
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Interpolate.cpp.o
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[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Mesh.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Mesh.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Mesh.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96_ext.cpp
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.h:9,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Function.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Function.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Function.cpp
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FundamentalAtomicQuantity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FundamentalAtomicQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FundamentalAtomicQuantity.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.cpp
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/GhostManager.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/GhostManager.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/GhostManager.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm_ext.cpp
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.cpp
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/InterscaleOperators.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/InterscaleOperators.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/InterscaleOperators.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf_ext.cpp
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KernelFunction.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KernelFunction.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KernelFunction.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KinetoThermostat.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KinetoThermostat.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KinetoThermostat.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Array.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Array2D.h:9,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KinetoThermostat.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KinetoThermostat.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MPI_Wrappers.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MPI_Wrappers.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MPI_Wrappers.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MPI_Wrappers.cpp:2:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Material.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Material.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Material.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_ext.cpp
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MeshReader.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MeshReader.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MeshReader.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MoleculeSet.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MoleculeSet.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MoleculeSet.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PaqAtcUtility.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PaqAtcUtility.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PaqAtcUtility.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp: In member function 'void ATC::OutputManager::read_restart_file(std::string, ATC::RESTART_LIST*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp:164:42: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&myVal,sizeof(double),1,fp);
                                          ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.cpp
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.cpp:18:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_kernel.h:27:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.cpp:17:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h: At global scope:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.cpp:25:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.cpp:27:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PolynomialSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PolynomialSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PolynomialSolver.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.cpp.o
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[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PrescribedDataManager.cpp.o
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[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Quadrature.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Quadrature.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Quadrature.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SchrodingerSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SchrodingerSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SchrodingerSolver.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft_ext.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SpeciesTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SpeciesTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SpeciesTimeIntegrator.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Stress.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Stress.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Stress.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ThermalTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ThermalTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ThermalTimeIntegrator.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SchrodingerSolver.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SchrodingerSolver.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Thermostat.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Thermostat.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Thermostat.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeFilter.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeFilter.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeFilter.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ThermalTimeIntegrator.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ThermalTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeIntegrator.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Thermostat.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Thermostat.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/DenseVector.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ViscousStress.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ViscousStress.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ViscousStress.cpp
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.cpp:26:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationChargeDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationChargeDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationChargeDiffusion.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationDiffusion.cpp
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm_ext.cpp:22:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.h:11,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronContinuity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronContinuity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronContinuity.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronMomentum.cpp.o
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[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationMassDiffusion.cpp.o
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[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.cpp.o
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[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationMomentum.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationMomentum.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationPhononTemperature.cpp.o
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[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.cpp.o
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[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationPoisson.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationPoisson.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationPoisson.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationSchrodinger.cpp.o
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CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationPhononTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationPoisson.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationSchrodinger.cpp.o
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.cpp
/usr/bin/ranlib libatc.a
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi'
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_deprecated.cpp
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_zero.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_zero.cpp: In member function 'virtual void LAMMPS_NS::AngleZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_zero.cpp:131:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_hybrid.cpp: In member function 'virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_hybrid.cpp:337:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_hybrid.cpp:346:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_hybrid.cpp:349:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_map.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_body.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_body.cpp
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_charge.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_charge.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_charge.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom.cpp: In member function 'void LAMMPS_NS::Atom::data_atoms(int, char*, LAMMPS_NS::tagint, LAMMPS_NS::tagint, int, int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom.cpp:975:48: warning: 'iptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       imagedata = ((imageint) (atoi(values[iptr]) + IMGMAX) & IMGMASK) |
                                                ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_zero.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/change_box.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/change_box.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/change_box.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/citeme.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_hybrid.cpp:338:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_hybrid.cpp:347:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_hybrid.cpp:350:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_zero.cpp: In member function 'virtual void LAMMPS_NS::BondZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_zero.cpp:129:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/comm.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_brick.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_brick.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_brick.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_tiled.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_tiled.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_tiled.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_brick.cpp: In member function 'virtual void LAMMPS_NS::CommBrick::borders()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_brick.cpp:702:28: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int nsend,nrecv,sendflag,nfirst,nlast,ngroup;
                            ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_adf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_adf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_adf.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_aggregate_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_aggregate_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_aggregate_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_tiled.cpp: In member function 'void LAMMPS_NS::CommTiled::box_drop_brick(int, double*, double*, int&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_tiled.cpp:1496:17: warning: 'dir' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += dir;
                 ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_adf.cpp: In member function 'virtual void LAMMPS_NS::ComputeADF::init()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_adf.cpp:309:7: warning: 'x0' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int x0;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_tiled.cpp: In member function 'virtual void LAMMPS_NS::CommTiled::borders()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_tiled.cpp:814:9: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
         for (i = atom->nlocal; i < nlast; i++) {
         ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angmom_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angmom_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angmom_chunk.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp: In member function 'int LAMMPS_NS::ComputeAngleLocal::compute_angles(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp:301:25: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ptr[n] = 180.0*theta/MY_PI;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp:309:17: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ivar++;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp:247:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp:245:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->angle_atom2[atom2][i]) continue;
                                       ^
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_centro_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_centro_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_centro_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_spread_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_spread_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_spread_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp: In member function 'int LAMMPS_NS::ComputeBondLocal::compute_bonds(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:400:28: warning: 'engrot' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engrot;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:397:28: warning: 'engvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engvib;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:403:30: warning: 'engtrans' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engtrans;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:391:28: warning: 'engpot' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engpot;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:406:34: warning: 'omegasq' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = sqrt(omegasq);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:409:26: warning: 'vvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = vvib;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:413:19: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ivar++;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:281:47: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         btype = onemols[imol]->bond_type[iatom][i];
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:281:29: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         btype = onemols[imol]->bond_type[iatom][i];
                             ^
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cluster_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cluster_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cluster_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cna_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cna_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin1d()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1514:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap < boxlo[idim]) xremap += prd[idim];
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1515:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap >= boxhi[idim]) xremap -= prd[idim];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1514:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap < boxlo[idim]) xremap += prd[idim];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin2d()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1616:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap < boxlo[jdim]) yremap += prd[jdim];
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1617:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap >= boxhi[jdim]) yremap -= prd[jdim];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1616:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap < boxlo[jdim]) yremap += prd[jdim];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin3d()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1749:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap < boxlo[kdim]) zremap += prd[kdim];
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1750:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap >= boxhi[kdim]) zremap -= prd[kdim];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1749:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap < boxlo[kdim]) zremap += prd[kdim];
                              ^
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com_chunk.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp: In constructor 'LAMMPS_NS::ComputeChunkAtom::ComputeChunkAtom(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:415:29: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
         delta[idim] *= scale;
                             ^
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_contact_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_contact_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_contact_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_coord_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_coord_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_coord_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_deprecated.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_displace_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_displace_atom.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_erotate_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_erotate_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_erotate_sphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_dihedral_local.cpp: In member function 'int LAMMPS_NS::ComputeDihedralLocal::compute_dihedrals(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_dihedral_local.cpp:319:17: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ivar++;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_dihedral_local.cpp:243:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_dihedral_local.cpp:242:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->dihedral_atom2[atom2][i]) continue;
                                       ^
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_erotate_sphere_atom.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration_chunk.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_global_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeGlobalAtom::compute_peratom()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_global_atom.cpp:517:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j >= 0 && j < vmax) array_atom[i][m] = source[j];
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_global_atom.cpp:448:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j >= 0 && j < vmax) array_atom[i][m] = source[j];
                             ^
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_heat_flux.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_inertia_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_inertia_chunk.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_improper_local.cpp: In member function 'int LAMMPS_NS::ComputeImproperLocal::compute_impropers(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_improper_local.cpp:162:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_improper_local.cpp:161:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->improper_atom2[atom2][i]) continue;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_improper_local.cpp:217:17: warning: 'cbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
           cbuf[n] = 180.0*acos(c)/MY_PI;
                 ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_chunk.cpp
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_local.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_local.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_local.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_pressure.cpp: In member function 'virtual double LAMMPS_NS::ComputePressure::compute_scalar()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_pressure.cpp:257:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       scalar = (temperature->dof * boltz * t +
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_pressure.cpp: In member function 'virtual void LAMMPS_NS::ComputePressure::compute_vector()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_pressure.cpp:304:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
                               ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/create_bonds.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_box.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_box.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/create_box.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_atoms.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::add_random()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp:663:55: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp:663:31: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp:224:46: warning: 'molseed' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ranmol = new RanMars(lmp,molseed+comm->me);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp:116:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"basis") == 0) {
                        ^
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_bonds.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_bonds.cpp: In member function 'void LAMMPS_NS::CreateBonds::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_bonds.cpp:129:10: warning: 'style' may be used uninitialized in this function [-Wmaybe-uninitialized]
   } else if (style == SANGLE) {
          ^
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/deprecated.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_deprecated.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_zero.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/displace_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/displace_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/displace_atoms.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp:322:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp:331:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp:334:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
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[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::box_too_small_check()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp:851:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp:851:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::image_check()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp:752:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp:752:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump.cpp: In member function 'virtual void LAMMPS_NS::Dump::write()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump.cpp:514:20: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->v = vhold;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump.cpp:513:20: warning: 'xhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->x = xhold;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump.cpp:515:28: warning: 'imagehold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->image = imagehold;
                            ^
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_dcd.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_movie.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_movie.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp: In member function 'virtual int LAMMPS_NS::DumpCustom::count()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp:1031:30: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 (*ptr != 0.0 && value != 0.0))
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp:528:13: warning: 'values' may be used uninitialized in this function [-Wmaybe-uninitialized]
     double *values;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp:527:18: warning: 'ptrhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     double *ptr,*ptrhold;
                  ^
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_xyz.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_xyz.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_xyz.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/error.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/error.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/error.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp: In member function 'void LAMMPS_NS::DumpImage::create_image()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:1033:66: warning: 'color2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:1027:66: warning: 'color1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             image->draw_cylinder(x[atom1],xmid,color1,diameter,3);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:968:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:968:41: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:831:55: warning: 'color' may be used uninitialized in this function [-Wmaybe-uninitialized]
       image->draw_cylinder(pt1,pt2,color,ldiamvalue,3);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:1036:72: warning: 'diameter' may be used uninitialized in this function [-Wmaybe-uninitialized]
         } else image->draw_cylinder(x[atom1],x[atom2],color,diameter,3);
                                                                        ^
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_adapt.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_addforce.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp: In member function 'void LAMMPS_NS::Finish::end(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp:773:33: warning: 'nneighfull' may be used uninitialized in this function [-Wmaybe-uninitialized]
     tmp = MAX(nneigh,nneighfull);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp:773:33: warning: 'nneigh' may be used uninitialized in this function [-Wmaybe-uninitialized]
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[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_chunk.cpp: In member function 'virtual void LAMMPS_NS::FixAveChunk::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_chunk.cpp:1058:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp:538:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp:854:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp:483:34: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
     values[lastindex][i] = scalar;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp: In member function 'virtual void LAMMPS_NS::FixAveHistoWeight::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp:496:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp.o
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[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_aveforce.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_aveforce.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_aveforce.cpp
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_balance.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_balance.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_box_relax.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_box_relax.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_box_relax.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:701:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_vector(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:912:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In member function 'int LAMMPS_NS::FixAveTime::column_length(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:972:9: warning: 'lengthone' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (lengthone != nrows)
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:630:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else vector[i] += scalar;
                             ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_controller.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_controller.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_controller.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_balance.cpp: In member function 'void LAMMPS_NS::FixBalance::rebalance()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_balance.cpp:297:67: warning: 'sendproc' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (lbstyle == BISECTION) irregular->migrate_atoms(0,1,sendproc);
                                                                   ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In constructor 'LAMMPS_NS::FixAveTime::FixAveTime(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:412:9: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (value == -1)
         ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deprecated.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_drag.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_drag.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_drag.cpp
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_dt_reset.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_dt_reset.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_enforce2d.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_enforce2d.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_enforce2d.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp: In constructor 'LAMMPS_NS::FixDeform::FixDeform(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp:183:18: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
         set[index].style = VARIABLE;
                  ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_external.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_neigh_history.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_neigh_history.cpp
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_nh.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_nh.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_nh.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_move.cpp: In member function 'virtual void LAMMPS_NS::FixMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_move.cpp:845:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_move.cpp:815:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_move.cpp:785:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
                                                             ^
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_nh_sphere.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_restrain.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_restrain.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_setforce.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_setforce.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_setforce.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_recenter.cpp: In member function 'virtual void LAMMPS_NS::FixRecenter::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_recenter.cpp:182:41: warning: 'bboxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_recenter.cpp:182:53: warning: 'bboxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]);
                                                     ^
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[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_spring_chunk.cpp.o
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[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_spring_rg.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_restrain.cpp: In member function 'void LAMMPS_NS::FixRestrain::restrain_dihedral(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_restrain.cpp:565:33: warning: 'ddf1' may be used uninitialized in this function [-Wmaybe-uninitialized]
   df1 = df1*cos_target[m] - ddf1*sin_target[m];
                                 ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_viscous.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_viscous.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_vector.cpp: In constructor 'LAMMPS_NS::FixVector::FixVector(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_vector.cpp:149:26: warning: 'finalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
     extarray = finalvalue;
                          ^
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[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj1043.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj1043.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj1043.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj126.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj126.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj126.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall.cpp: In constructor 'LAMMPS_NS::FixWall::FixWall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall.cpp:75:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_reflect.cpp: In constructor 'LAMMPS_NS::FixWallReflect::FixWallReflect(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_reflect.cpp:67:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/hashlittle.cpp.o
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[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp:738:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&ngroup,sizeof(int),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp:750:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp:754:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(names[i],sizeof(char),n,fp);
                                                     ^
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance_group.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance_group.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance_group.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp: In member function 'void LAMMPS_NS::Image::draw_cube(double*, double*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp:515:31: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
           tdir[2] = camDir[2] * t;
                               ^
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance_neigh.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_zero.cpp
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/info.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/info.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/info.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_hybrid.cpp:319:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_hybrid.cpp:328:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_hybrid.cpp:331:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/input.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/integrate.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/lmppython.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp: In function 'void MathExtra::no_squish_rotate(int, double*, double*, double*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:260:52: warning: 'kq[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:260:39: warning: 'kq[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:260:26: warning: 'kq[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:260:13: warning: 'kq[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:271:28: warning: 'kp[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[3] = c_phi*p[3] + s_phi*kp[3];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:270:28: warning: 'kp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[2] = c_phi*p[2] + s_phi*kp[2];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:269:28: warning: 'kp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[1] = c_phi*p[1] + s_phi*kp[1];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:268:28: warning: 'kp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[0] = c_phi*p[0] + s_phi*kp[0];
                            ^
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_special.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/memory.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/minimize.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/minimize.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/molecule.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/molecule.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/molecule.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1367:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1384:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1387:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(id_restart_global[i],sizeof(char),n,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1390:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1393:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(style_restart_global[i],sizeof(char),n,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1396:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1399:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(state_restart_global[i],sizeof(char),n,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1409:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nfix_restart_peratom,sizeof(int),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1426:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1429:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(id_restart_peratom[i],sizeof(char),n,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1432:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1435:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(style_restart_peratom[i],sizeof(char),n,fp);
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1438:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/nbin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/nbin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/nbin.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/nbin_standard.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/nbin_standard.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/nbin_standard.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/neigh_list.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/neigh_list.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/neigh_list.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/neigh_request.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/neigh_request.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/neigh_request.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_stencil(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp:1673:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (newtflag) {
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_pair(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp:1781:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (newtflag) {
     ^
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_copy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_copy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_copy.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBin::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp:103:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp:101:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp:101:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_atomonly.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_atomonly.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_atomonly.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBinGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp:109:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp:107:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp:107:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp: In member function 'virtual void LAMMPS_NS::NPairFullMulti::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp:110:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp:108:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp:108:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsq::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp:104:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp:102:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp:102:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp:88:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsqGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp:103:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp:101:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp:101:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_atomonly_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_atomonly_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_atomonly_newton.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp:107:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp:105:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp:105:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp:115:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp:113:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp:113:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp:139:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp:137:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp:137:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp:113:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp:111:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp:111:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp:122:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp:120:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp:120:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp:147:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp:145:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp:145:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp:105:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp:103:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp:103:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp:89:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp:126:39: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (includegroup && !(mask[j] & bitmask)) continue;
                                       ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp:122:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp:120:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp:120:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp:90:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:173:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:131:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:129:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:129:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:151:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
               neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:20:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:71:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:219:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:177:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:175:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:175:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:152:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:20:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:70:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:219:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:220:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       numneigh_middle[i] = n_middle;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:218:29: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ilist_middle[inum] = i;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:181:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:139:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:137:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:137:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:159:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
               neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:20:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:71:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:168:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:129:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:127:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:127:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:147:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:75:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:113:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newtoff.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:188:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:148:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:146:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:146:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:167:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:77:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:116:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton_tri.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newtoff.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newton.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newtoff.cpp:77:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newton.cpp:80:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_halffull_newtoff.cpp.o
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[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_size.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_size.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_size.cpp
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_size_off2on.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_size_off2on.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_size_off2on.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipRespa::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp:149:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp:150:36: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       numneigh_middle[i] = n_middle;
                                    ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:223:67: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (posix_memalign(&ptr, LAMMPS_MEMALIGN, pagesize*sizeof(T)))
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp:61:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_size_off2on_oneside.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp: In member function 'void LAMMPS_NS::LAMMPS::init_pkg_lists()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp:901:13: note: variable tracking size limit exceeded with -fvar-tracking-assignments, retrying without
 void _noopt LAMMPS::init_pkg_lists()
             ^
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ntopo_angle_all.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ntopo_dihedral_template.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ntopo_dihedral_template.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ntopo_improper_all.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ntopo_improper_all.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ntopo_improper_all.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp: In constructor 'LAMMPS_NS::LAMMPS::LAMMPS(int, char**, MPI_Comm)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp:639:5: warning: 'wlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
     for (iarg = wfirst; iarg < wlast; iarg++)
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp:165:7: warning: 'wfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int wfirst,wlast;
       ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ntopo_improper_partial.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:280:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:284:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&AA[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:285:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&BB[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:286:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&aa[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:287:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:288:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&beta[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:289:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:319:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:320:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:332:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:336:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:337:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:338:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:339:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:340:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:341:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:372:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:373:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:374:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:375:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp: In member function 'void LAMMPS_NS::Pair::write_file(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:1675:5: warning: 'rsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (rsq < cutsq[itype][jtype]) {
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:1686:32: warning: 'q_hold' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (atom->q) atom->q = q_hold;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp: In member function 'virtual void LAMMPS_NS::Pair::init_tables(double, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:412:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (msmflag) ftable[i] = qqrd2e/r * fgamma;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:399:30: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
         etable[i] = qqrd2e/r * egamma;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:403:30: warning: 'derfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
         etable[i] = qqrd2e/r * derfc;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:413:61: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:413:56: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
           else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
                                                        ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:363:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:367:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:368:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:369:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:371:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:372:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:404:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:405:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:406:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:407:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:408:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:362:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:366:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:367:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:368:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:369:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:371:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:403:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alf,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:404:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:405:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:406:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:407:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:165:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:161:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:162:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:166:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:161:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:484:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:485:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:479:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:480:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:479:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:486:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:487:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:481:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:482:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:481:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:310:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:314:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:315:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:316:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:317:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:346:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:347:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:348:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:349:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:168:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:165:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:169:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:366:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:371:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:372:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:373:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:374:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:405:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:406:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:407:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:408:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:409:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:467:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:467:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:146:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:146:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_streitz.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_streitz.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_streitz.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:247:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:250:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&cut[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:274:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:275:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:276:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDebye::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp:148:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp:149:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp:150:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp:151:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:255:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:279:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:280:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:281:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:282:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_deprecated.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:251:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:275:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alf,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:276:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:277:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:278:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:315:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:316:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:315:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                         ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:316:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:320:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:321:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:322:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:350:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&temperature,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:351:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:352:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:353:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:234:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:238:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:239:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:267:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_start,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:268:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_stop,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:269:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:270:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:271:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:282:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:286:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:287:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:288:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:315:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:316:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:317:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:676:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:699:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(compute_tally,sizeof(int),nstyles,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:704:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:707:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:713:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:717:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(special_lj[m],sizeof(double),4,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:720:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:724:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(special_coul[m],sizeof(double),4,fp);
                                                              ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp: In member function 'virtual void LAMMPS_NS::PairHybridOverlay::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp:44:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int multflag;
       ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:399:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int multflag;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:608:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:612:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:613:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:614:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:643:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:644:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:645:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:646:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:279:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:283:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:284:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:285:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:286:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:313:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp: In member function 'virtual double LAMMPS_NS::PairLJCubic::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:345:32: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:342:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:130:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:127:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:390:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_lj*forcelj*r2inv;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:394:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:602:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:606:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:607:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:608:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:637:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:638:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:639:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:640:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:384:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_lj*forcelj*r2inv;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:388:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:355:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:359:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:360:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:361:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:362:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:392:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:393:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:394:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:395:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:396:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:451:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:138:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:173:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:174:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:175:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:176:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:177:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:378:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:382:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:383:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:384:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:414:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:415:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:416:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:417:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:418:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:419:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDebye::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:215:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:211:71: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:211:53: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:109:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:109:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:112:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:166:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:167:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:160:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:166:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:463:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:463:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:463:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:457:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:370:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:374:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:375:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:376:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:407:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alf,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:409:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:410:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:411:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:412:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:166:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:159:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:326:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:330:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:331:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:332:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shift[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:333:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:362:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:363:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:364:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:365:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:341:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:345:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:346:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:347:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:348:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:378:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:379:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:380:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:381:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:435:65: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                 ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:137:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:380:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:384:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:385:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:414:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:415:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:416:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_inner,sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:417:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:418:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:419:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacsCoulGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:501:51: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:497:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:490:38: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tc*tc*tc * (coulsw3 + coulsw4*tc);
                                      ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:157:58: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoulswitch = tc*tc*tc * (coulsw3 + coulsw4*tc);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:167:59: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:163:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:163:46: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                              ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:354:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:358:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:359:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:360:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:361:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:391:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:392:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:393:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:394:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp: In member function 'virtual double LAMMPS_NS::PairLJSmooth::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:452:30: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:451:60: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 -
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:447:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]) -
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:142:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:141:68: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 -
                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:137:27: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
                           ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:285:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:289:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:290:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:291:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:318:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:319:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:629:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:633:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:634:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:635:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamR[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:636:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamA[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:637:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:668:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:669:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:670:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:671:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:267:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:271:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:272:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:273:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:274:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:302:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:303:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:304:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:392:46: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_mie*forcemie*r2inv;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:396:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:247:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:251:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&prefactor[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:252:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:277:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:278:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:979:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:980:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:981:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewaldflag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:982:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&pppmflag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:983:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&msmflag,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:984:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&dispersionflag,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:985:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tip4pflag,sizeof(int),1,fp);
                                       ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp: In member function 'virtual double LAMMPS_NS::PairTable::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:1044:41: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:1044:14: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:1041:35: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phi = tb->e[itable] + fraction*tb->de[itable];
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:178:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:178:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:175:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:281:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:285:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:286:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:287:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:315:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:316:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:317:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:255:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:259:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:260:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:287:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:288:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:289:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:290:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/random_mars.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/random_mars.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/random_mars.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp: In member function 'virtual void LAMMPS_NS::PairZBL::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp:131:53: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp: In member function 'virtual double LAMMPS_NS::PairZBL::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp:279:45: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                             ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/random_park.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/random_park.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/random_park.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp:173:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp:177:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp:202:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp:203:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&coeffflag,sizeof(int),1,fp);
                                       ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_data.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_data.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/read_data.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp: In member function 'void LAMMPS_NS::ProcMap::output(char*, int*, int***)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp:693:16: warning: 'kme' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[5] = kme + 1;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp:692:16: warning: 'jme' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[4] = jme + 1;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp:691:16: warning: 'ime' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[3] = ime + 1;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp: In member function 'int LAMMPS_NS::ProcMap::best_factors(int, int**, int*, int, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp:887:10: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return index;
          ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp:576:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
                                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp:504:29: warning: 'valuehalf_select' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else lo[dim] = valuehalf;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute_old(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp:1068:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
                                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::seek(LAMMPS_NS::bigint, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp:283:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized]
   bigint ntimestep;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::next(LAMMPS_NS::bigint, LAMMPS_NS::bigint, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp:423:5: warning: 'eofflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (eofflag) ntimestep = -1;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp:378:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized]
   bigint ntimestep;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:305:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&flag,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:309:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&procsperfile,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:312:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:316:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&n,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:322:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(buf,sizeof(double),n,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:382:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&flag,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:385:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&procsperfile,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:394:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:398:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&n,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:404:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(buf,sizeof(double),n,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_layout()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:1104:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(all_written_send_sizes,sizeof(int),nprocs_file,fp);
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'char* LAMMPS_NS::ReadRestart::read_string()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:1286:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(value,sizeof(char),n,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_int_vec(int, int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:1298:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(vec,sizeof(int),n,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_double_vec(int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:1309:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(vec,sizeof(double),n,fp);
                                              ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/reader.cpp.o
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[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cone.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cone.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cone.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region.cpp: In member function 'int LAMMPS_NS::Region::surface(double, double, double, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region.cpp:190:34: warning: 'xorig[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].delz = xorig[2] - zs;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region.cpp:189:34: warning: 'xorig[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].dely = xorig[1] - ys;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region.cpp:188:34: warning: 'xorig[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].delx = xorig[0] - xs;
                                  ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_deprecated.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp: In member function 'virtual int LAMMPS_NS::RegCylinder::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp:716:30: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     add_contact(0,x,xp,yp,zp);
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp:716:30: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp:716:30: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp: In member function 'virtual int LAMMPS_NS::RegBlock::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp:334:28: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
   add_contact(0,x,xp,yp,zp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp:334:28: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp:334:28: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_intersect.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_intersect.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_intersect.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_plane.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_prism.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/special.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/special.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/special.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/run.cpp: In member function 'void LAMMPS_NS::Run::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/run.cpp:172:41: warning: 'stop' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (stopflag) update->endstep = stop;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/run.cpp:170:45: warning: 'start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (startflag) update->beginstep = start;
                                             ^
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/thermo.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/thermo.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/thermo.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/timer.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/timer.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/timer.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/set.cpp: In member function 'void LAMMPS_NS::Set::setrandom(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/set.cpp:1150:24: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized]
           quat[1] = 0.0;
                        ^
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/universe.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/universe.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/universe.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/update.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/update.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/update.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/utils.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/utils.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/utils.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/universe.cpp: In member function 'void LAMMPS_NS::Universe::reorder(char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/universe.cpp:148:38: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
   MPI_Comm_split(uorig,0,key,&uworld);
                                      ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::next(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:685:33: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
       fscanf(fp,"%d",&nextindex);
                                 ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/verlet.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/verlet.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/verlet.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp: In member function 'void LAMMPS_NS::Velocity::set(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:544:63: warning: 'zvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(zvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:539:63: warning: 'yvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(yvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:534:63: warning: 'xvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(xvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:457:17: warning: 'vz' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vz *= zscale;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:453:17: warning: 'vy' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vy *= yscale;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:449:17: warning: 'vx' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vx *= xscale;
                 ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_coeff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_coeff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/write_coeff.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:30:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/memory.h: In member function 'void LAMMPS_NS::Velocity::create(double, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/memory.h:171:5: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     sfree(array[0]);
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:165:12: note: 'vhold' was declared here
   double **vhold;
            ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_data.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_data.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/write_data.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_dump.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/write_dump.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_restart.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/write_restart.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::group_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:3994:39: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
   } else argstack[nargstack++] = value;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate_boolean(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:4764:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int op,opprevious,flag1,flag2;
       ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:4068:20: warning: 'nstride' may be used uninitialized in this function [-Wmaybe-uninitialized]
     int index,nvec,nstride;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:4211:7: warning: 'nvec' may be used uninitialized in this function [-Wmaybe-uninitialized]
       for (int i = 0; i < nvec; i++) {
       ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_temp_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_temp_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_temp_asphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate(char*, LAMMPS_NS::Variable::Tree**, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:1186:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int op,opprevious;
       ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nh_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nh_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nh_asphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp: In member function 'virtual double LAMMPS_NS::ComputeERotateAsphere::compute_scalar()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp:138:35: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertia[0] = tbonus[tri[i]].inertia[0];
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp:129:32: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         length = lbonus[line[i]].length;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp:108:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nph_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nph_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nph_asphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'void LAMMPS_NS::Variable::compute_atom(int, int, double*, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:964:11: warning: 'vstore' may be used uninitialized in this function [-Wmaybe-uninitialized]
   double *vstore;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::math_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:3746:37: warning: 'value2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       double value = value1 + value2*(1.0-cos(omega*delta*update->dt));
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:3412:42: warning: 'value1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       argstack[nargstack++] = sqrt(value1);
                                          ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_npt_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_npt_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_npt_asphere.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nve_asphere.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nvt_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nvt_asphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nve_asphere_noforce.cpp: In member function 'virtual void LAMMPS_NS::FixNVEAsphereNoforce::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nve_asphere_noforce.cpp:88:33: warning: 'bonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = bonus[ellipsoid[i]].shape;
                                 ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_line_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_line_lj.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:463:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:466:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:470:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:474:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:475:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:476:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:508:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gamma,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:509:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&upsilon,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:510:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:511:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:512:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:513:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:441:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:444:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:448:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:452:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:453:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:454:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:482:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:483:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp: In member function 'double LAMMPS_NS::PairGayBerne::gayberne_analytic(int, int, double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double*, double, double*, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:726:36: warning: 'deta2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:725:36: warning: 'deta2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:724:36: warning: 'deta2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:726:21: warning: 'dchi2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:725:21: warning: 'dchi2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:724:21: warning: 'dchi2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:726:51: warning: '*((void*)& dUr2 +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:725:51: warning: '*((void*)& dUr2 +8)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:724:51: warning: 'dUr2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_line_lj.cpp: In member function 'virtual void LAMMPS_NS::PairLineLJ::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_line_lj.cpp:304:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_nparticle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_nparticle.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:216:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp: In member function 'virtual void LAMMPS_NS::PairTriLJ::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp:378:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polygon.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polygon.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:191:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_body_local.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_body_local.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_body_local.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_temp_body.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_temp_body.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_temp_body.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::BodyRoundedPolyhedron::data_body(int, int, int, int*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp:216:7: warning: 'nedges' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int nedges,nentries;
       ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_nh_body.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_nh_body.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_nh_body.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_nph_body.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polygon.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolygon::post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polygon.cpp:337:60: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
                           contact_list, num_contacts, facc);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polygon.cpp:299:9: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (delr > eradi) dz = cylradius;
         ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:244:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable]
       int interact, num_contacts, done;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:14: warning: variable 'rsqinv' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:33: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:39: warning: variable 'eradj' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:45: warning: variable 'rradi' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:51: warning: variable 'rradj' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolygon::sphere_against_sphere(int, int, double, double, double, double, double, double, double**, double**, double**, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:601:10: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
   double eradi,eradj,rradi,rradj;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:601:16: warning: variable 'eradj' set but not used [-Wunused-but-set-variable]
   double eradi,eradj,rradi,rradj;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:603:32: warning: variable 'fn' set but not used [-Wunused-but-set-variable]
   double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:603:38: warning: variable 'ft' set but not used [-Wunused-but-set-variable]
   double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolygon::vertex_against_edge(int, int, double, double, double**, double**, double**, LAMMPS_NS::tagint*, LAMMPS_NS::PairBodyRoundedPolygon::Contact*, int&, double&, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:706:24: warning: variable 'nei' set but not used [-Wunused-but-set-variable]
   int ni, npi, ifirst, nei, iefirst;
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:706:29: warning: variable 'iefirst' set but not used [-Wunused-but-set-variable]
   int ni, npi, ifirst, nei, iefirst;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:707:11: warning: variable 'npj' set but not used [-Wunused-but-set-variable]
   int nj, npj, jfirst, nej, jefirst;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:708:32: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
   double xpi[3], xpj[3], dist, eradi, eradj, rradi, rradj;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolyhedron::post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polyhedron.cpp:357:58: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         contact_list, num_contacts, facc);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_nparticle.cpp: In member function 'virtual void LAMMPS_NS::PairBodyNparticle::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_nparticle.cpp:325:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:274:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable]
       int interact, num_contacts;
           ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolyhedron::sanity_check()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:2344:22: warning: variable 'x3' set but not used [-Wunused-but-set-variable]
   double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:2344:28: warning: variable 'x4' set but not used [-Wunused-but-set-variable]
   double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:106:15: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int nei,nej,iefirst,jefirst;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:106:7: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int nei,nej,iefirst,jefirst;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:105:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:105:13: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst;
             ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:375:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:376:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:377:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:378:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:380:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_k[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:381:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:382:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:384:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:385:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:386:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:387:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp: In member function 'virtual void LAMMPS_NS::BondClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp:185:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp:186:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp:187:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp:188:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp: In member function 'virtual void LAMMPS_NS::DihedralClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:838:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:839:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:840:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:841:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:842:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:843:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:845:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:846:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:847:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:848:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_r0[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:850:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:851:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:852:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:853:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_r0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:855:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:856:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:857:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:858:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_r0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:860:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:861:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:862:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:863:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:865:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:866:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:867:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:868:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:870:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:871:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:872:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:874:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:875:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_r10[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:876:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_r30[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:218:21: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (r > eradi + eradj + cut_inner) continue;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:121:43: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:121:35: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:121:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:121:13: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
             ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp: In member function 'virtual void LAMMPS_NS::ImproperClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:607:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:608:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi0[1],sizeof(double),atom->nimpropertypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:610:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k1[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:611:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k2[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:612:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k3[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:613:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_1[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:614:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_2[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:615:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_3[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:613:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:617:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:618:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:619:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:648:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:649:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:650:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:651:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp: In member function 'void LAMMPS_NS::ImproperClass2::angleangle(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:823:58: warning: 'eimproper' may be used uninitialized in this function [-Wmaybe-uninitialized]
                delxBD-delxBC,delyBD-delyBC,delzBD-delzBC);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:393:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_lj*forcelj*r2inv;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:397:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:369:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:370:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:371:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:372:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:402:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:403:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:404:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:405:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:406:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/fix_wall_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/fix_wall_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/fix_wall_colloid.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:463:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:463:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:143:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:143:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:808:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:812:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:813:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:814:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:845:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:846:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:847:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:848:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:849:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:850:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:851:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:940:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:940:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:933:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:933:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:936:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:931:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:605:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:609:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:610:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:645:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:646:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:647:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagfld,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:648:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:649:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:650:42: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_target, sizeof(double),1,fp);
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:651:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed, sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:652:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:653:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:654:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:655:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:539:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:513:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:539:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:539:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:545:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:542:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:179:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:184:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:187:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:187:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:181:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:181:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:304:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_pu);
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:236:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_sh);
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp: In member function 'virtual void LAMMPS_NS::PairBrownianPoly::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp:290:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_pu);
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp:239:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_sh);
                                          ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:397:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (comm->me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:401:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a12[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:402:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:403:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d1[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:404:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:405:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:435:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:436:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:437:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU_poly.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual double LAMMPS_NS::PairColloid::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:540:20: warning: 'phi' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return factor_lj*phi;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:191:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       f[i][2] += delz*fpair;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:685:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:689:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:690:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:723:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:724:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:725:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagfld,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:726:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:727:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:728:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:729:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:730:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:731:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1911:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1915:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1916:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1948:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1949:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1950:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1951:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1952:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1953:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1954:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1955:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate_poly.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_yukawa_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_yukawa_colloid.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/compute_temp_cs.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSFCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:141:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:137:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:138:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:142:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:137:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:178:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:170:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:175:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:179:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:172:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:172:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolfCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:141:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:138:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:142:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_wolf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_wolf_cs.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:176:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:168:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:173:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:176:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:170:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:170:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/atom_vec_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/atom_vec_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/atom_vec_dipole.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp:157:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp:162:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp:159:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp:159:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:526:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:502:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:526:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:526:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:532:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:529:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:169:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:174:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:178:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:171:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:171:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:440:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:444:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:445:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:446:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:447:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:476:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:477:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:478:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:479:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:493:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:497:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:498:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:499:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:527:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:528:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:529:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:530:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:239:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:70: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:54: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:47: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:31: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:70: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:54: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:300:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:237:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:235:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:235:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:239:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:244:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:347:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:351:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_read[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:352:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_read[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:353:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:382:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:383:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:384:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:385:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:386:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_freeze.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran_region.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran_region.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hertz_history.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hertz_history.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hertz_history.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp: In member function 'virtual void LAMMPS_NS::FixPour::pre_exchange()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp:679:42: warning: 'natom' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ninserted_mols = ninserted_atoms / natom;
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp:695:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
       atom->nbonds += onemols[imol]->nbonds * ninserted_mols;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp:653:65: warning: 'denstmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
           atom->rmass[n] = 4.0*MY_PI/3.0 * radtmp*radtmp*radtmp * denstmp;
                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp:502:30: warning: 'radtmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
         coords[0][3] = radtmp;
                              ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp: In member function 'void LAMMPS_NS::FixWallGran::granular(double, double, double, double, double*, double, double*, double*, double*, double*, double, double, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1363:49: warning: 'relrot3' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1363:36: warning: 'relrot2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1363:23: warning: 'relrot1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1172:55: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
   damp_normal_prefactor = normal_coeffs[1]*damp_normal;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1203:23: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
     F_pulloff = 4*M_PI*coh*Reff;
                       ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:543:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:569:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kn,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:570:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kt,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:571:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gamman,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:572:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gammat,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:573:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&xmu,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:574:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&dampflag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1253:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1257:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&normal_model[i][j],sizeof(int),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1258:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&damping_model[i][j],sizeof(int),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1259:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&tangential_model[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1260:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&roll_model[i][j],sizeof(int),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1261:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&twist_model[i][j],sizeof(int),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1262:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(normal_coeffs[i][j],sizeof(double),4,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1263:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(tangential_coeffs[i][j],sizeof(double),3,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1264:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(roll_coeffs[i][j],sizeof(double),3,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1265:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(twist_coeffs[i][j],sizeof(double),3,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1266:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cutoff_type[i][j],sizeof(double),1,fp);
                                                        ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual double LAMMPS_NS::PairGranular::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1644:27: warning: 'magtortwist' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[8] = magtortwist;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1642:19: warning: 'fr3' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[6] = fr3;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1641:19: warning: 'fr2' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[5] = fr2;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1640:19: warning: 'fr1' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[4] = fr1;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1643:18: warning: 'fr' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[7] = fr;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1615:49: warning: 'relrot3' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1615:36: warning: 'relrot2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1615:23: warning: 'relrot1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1626:55: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtortwist = -k_twist*history[twist_history_index] - damp_twist*magtwist;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1461:69: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
   damp_normal_prefactor = normal_coeffs[itype][jtype][1]*damp_normal;
                                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1436:40: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
     sqrt3 = MAX(0, 4*dR - t5 + SIXROOT6*coh*MY_PI*R2/(E*t6));
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1436:50: warning: 'R2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     sqrt3 = MAX(0, 4*dR - t5 + SIXROOT6*coh*MY_PI*R2/(E*t6));
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:382:49: warning: 'allhistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
           history = &allhistory[size_history*jj];
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:452:71: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
             shrmag = sqrt(history[0]*history[0] + history[1]*history[1] +
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:168:8: warning: 'touch' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *touch,**firsttouch;
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:389:30: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
           F_pulloff = 4*MY_PI*coh*Reff;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:353:75: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
         damp_normal_prefactor = normal_coeffs[itype][jtype][1]*damp_normal;
                                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:226:34: warning: 'firsthistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
       allhistory = firsthistory[i];
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:225:27: warning: 'firsttouch' may be used uninitialized in this function [-Wmaybe-uninitialized]
       touch = firsttouch[i];
                           ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp: In member function 'virtual void LAMMPS_NS::EwaldDipole::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp:506:16: warning: unused variable 'vk' [-Wunused-variable]
     double uk, vk;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp:413:18: warning: unused variable 'partial2' [-Wunused-variable]
   double partial,partial2,partial_peratom;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp: In member function 'void LAMMPS_NS::EwaldDipole::slabcorr()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp:780:12: warning: unused variable 'x' [-Wunused-variable]
   double **x = atom->x;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp:781:10: warning: unused variable 'zprd' [-Wunused-variable]
   double zprd = domain->zprd;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp: In member function 'virtual void LAMMPS_NS::EwaldDipoleSpin::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:485:16: warning: unused variable 'vk' [-Wunused-variable]
     double uk, vk;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp: In member function 'void LAMMPS_NS::EwaldDipoleSpin::slabcorr()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:766:12: warning: unused variable 'x' [-Wunused-variable]
   double **x = atom->x;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:767:10: warning: unused variable 'zprd' [-Wunused-variable]
   double zprd = domain->zprd;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:772:10: warning: unused variable 'spx' [-Wunused-variable]
   double spx,spy,spz;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:772:14: warning: unused variable 'spy' [-Wunused-variable]
   double spx,spy,spz;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:920:79: warning: 'normal_coeffs_one[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         normal_coeffs[i][j][0] = normal_coeffs[j][i][0] = normal_coeffs_one[0];
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:912:61: warning: 'normal_coeffs_one[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       normal_coeffs[i][j][1] = normal_coeffs[j][i][1] = damp;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:918:60: warning: 'normal_coeffs_one[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                     poiss[i][j],poiss[i][j]);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:923:79: warning: 'normal_coeffs_one[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         normal_coeffs[i][j][3] = normal_coeffs[j][i][3] = normal_coeffs_one[3];
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual double LAMMPS_NS::PairGranular::init_one(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1213:10: warning: 'cutoff' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return cutoff;
          ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_disp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_disp.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d_wrap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d_wrap.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp: In member function 'virtual void LAMMPS_NS::EwaldDipoleSpin::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:430:27: warning: 'partial2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       tk[i][0] += partial2*eg[k][0];
                           ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fix_tune_kspace.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fix_tune_kspace.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fix_tune_kspace.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp: In function 'void fft_3d(double (*)[2], double (*)[2], int, fft_plan_3d*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp:69:9: warning: variable 'total' set but not used [-Wunused-but-set-variable]
   int i,total,length,offset,num;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp:69:15: warning: variable 'length' set but not used [-Wunused-but-set-variable]
   int i,total,length,offset,num;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp:69:22: warning: unused variable 'offset' [-Wunused-variable]
   int i,total,length,offset,num;
                      ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:424:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:428:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:429:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:430:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:431:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:432:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:433:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:467:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:468:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:469:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:470:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:471:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:472:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:473:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:565:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:566:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:558:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:558:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:561:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:556:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:188:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:180:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:185:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:189:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:182:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:182:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:182:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:179:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:178:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:183:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:241:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:242:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:237:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:236:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:402:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:406:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:407:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:409:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:441:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:442:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:443:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:444:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:445:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:446:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:447:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp: In member function 'virtual void LAMMPS_NS::MSM::direct(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1640:47: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v5sum += v5_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1639:47: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v4sum += v4_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1638:47: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v3sum += v3_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1637:47: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v2sum += v2_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1636:47: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v1sum += v1_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1635:47: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v0sum += v0_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:537:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:537:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:530:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:530:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:533:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:528:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:182:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:174:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:179:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:182:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:176:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:176:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp: In member function 'void LAMMPS_NS::MSM::direct_top(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1995:50: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v5sum += v5_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1994:50: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v4sum += v4_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1993:50: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v3sum += v3_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1992:50: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v2sum += v2_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1991:50: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v1sum += v1_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1990:50: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v0sum += v0_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:358:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:362:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_a_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:363:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_rho_read[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:364:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_c_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_buck_read[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:397:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_buck_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:398:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:399:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:400:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:401:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:402:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:403:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:178:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:175:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:174:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:178:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:236:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:236:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:232:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:231:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:292:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:295:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&scale[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:321:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:322:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:323:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:324:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:325:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:372:29: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:374:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:374:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:372:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:156:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:161:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:158:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:158:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:143:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:138:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:140:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:140:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:198:31: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:200:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:200:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:198:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:825:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:829:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:830:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:831:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:832:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:864:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:865:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:866:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:867:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:868:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:869:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:870:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:892:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:896:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:897:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:898:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:899:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:931:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:932:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:933:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:934:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:935:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:936:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:937:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:377:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:405:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * fgamma;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:377:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:411:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:408:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:969:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:961:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:961:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:964:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:959:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:514:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:506:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:506:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:509:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:504:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*egamma;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1045:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       philj6 = -lj4[itype][jtype]*r6inv +
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1040:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1028:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1028:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1031:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1026:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:208:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:203:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:205:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:205:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:544:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:516:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:544:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:544:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:550:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:547:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:604:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:567:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:604:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:604:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:610:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:607:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:193:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:198:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:202:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:195:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:195:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:202:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:214:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:219:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:235:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl6 = -lj4[itype][jtype]*r6inv +
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:216:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:216:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:233:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl12 = r6inv*lj3[itype][jtype]*r6inv -
                                               ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:796:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:800:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:801:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:802:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:833:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:834:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:835:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:836:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:837:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:838:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:839:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:930:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:922:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:922:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:925:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:920:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:354:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:378:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * fgamma;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:354:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:384:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:381:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:464:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:456:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:456:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:459:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:454:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*egamma;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:533:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:509:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:533:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:533:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:539:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:536:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:198:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:193:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:202:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:195:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:195:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:531:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:532:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:533:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:534:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:535:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:537:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:538:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:539:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:540:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:541:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:542:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:543:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:180:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:185:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:189:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:182:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:182:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:358:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:362:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_read[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:363:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_read[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:364:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:395:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:396:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:397:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:398:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:399:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:400:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:401:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:409:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:414:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:411:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:404:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:403:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:331:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:327:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:411:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1542:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1543:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1544:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1545:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1546:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1548:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1549:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1550:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1551:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1552:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1553:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:470:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:471:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:472:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:473:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:474:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:377:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:382:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:379:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:372:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:371:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:299:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:295:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:379:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_middle()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:974:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:970:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:943:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:939:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_cg.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_cg.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:445:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:450:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:447:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:440:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:439:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:367:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:363:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:447:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_inner()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:713:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:709:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:682:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:678:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1415:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1414:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1316:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1312:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h: In constructor 'LAMMPS_NS::PPPMDipole::PPPMDipole(LAMMPS_NS::LAMMPS*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:63:55: warning: 'LAMMPS_NS::PPPMDipole::uz_brick_dipole' will be initialized after [-Wreorder]
   FFT_SCALAR ***ux_brick_dipole,***uy_brick_dipole,***uz_brick_dipole;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:61:17: warning:   'FFT_SCALAR*** LAMMPS_NS::PPPMDipole::vdxx_brick_dipole' [-Wreorder]
   FFT_SCALAR ***vdxx_brick_dipole,***vdyy_brick_dipole,***vdzz_brick_dipole;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:60:1: warning:   when initialized here [-Wreorder]
 PPPMDipole::PPPMDipole(LAMMPS *lmp) : PPPM(lmp),
 ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:62:17: warning: 'LAMMPS_NS::PPPMDipole::vdxy_brick_dipole' will be initialized after [-Wreorder]
   FFT_SCALAR ***vdxy_brick_dipole,***vdxz_brick_dipole,***vdyz_brick_dipole;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:61:38: warning:   'FFT_SCALAR*** LAMMPS_NS::PPPMDipole::vdyy_brick_dipole' [-Wreorder]
   FFT_SCALAR ***vdxx_brick_dipole,***vdyy_brick_dipole,***vdzz_brick_dipole;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:60:1: warning:   when initialized here [-Wreorder]
 PPPMDipole::PPPMDipole(LAMMPS *lmp) : PPPM(lmp),
 ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:62:59: warning: 'LAMMPS_NS::PPPMDipole::vdyz_brick_dipole' will be initialized after [-Wreorder]
   FFT_SCALAR ***vdxy_brick_dipole,***vdxz_brick_dipole,***vdyz_brick_dipole;
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:61:59: warning:   'FFT_SCALAR*** LAMMPS_NS::PPPMDipole::vdzz_brick_dipole' [-Wreorder]
   FFT_SCALAR ***vdxx_brick_dipole,***vdyy_brick_dipole,***vdzz_brick_dipole;
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:60:1: warning:   when initialized here [-Wreorder]
 PPPMDipole::PPPMDipole(LAMMPS *lmp) : PPPM(lmp),
 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp: In member function 'virtual void LAMMPS_NS::PPPMDipole::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:537:13: warning: unused variable 'q' [-Wunused-variable]
     double *q = atom->q;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:540:9: warning: unused variable 'ntotal' [-Wunused-variable]
     int ntotal = nlocal;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp: In member function 'double LAMMPS_NS::PPPMDipole::compute_qopt_dipole()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:929:10: warning: variable 'cnx' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:929:14: warning: variable 'cny' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:929:18: warning: variable 'cnz' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:932:10: warning: variable 'numerator' set but not used [-Wunused-but-set-variable]
   double numerator,denominator;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:933:13: warning: unused variable 'u2' [-Wunused-variable]
   double u1,u2,u3,sqk;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:933:16: warning: unused variable 'u3' [-Wunused-variable]
   double u1,u2,u3,sqk;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp: In member function 'void LAMMPS_NS::PPPMDipole::compute_gf_dipole()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:1024:10: warning: variable 'cnx' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:1024:14: warning: variable 'cny' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:1024:18: warning: variable 'cnz' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:1027:10: warning: variable 'numerator' set but not used [-Wunused-but-set-variable]
   double numerator,denominator;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp: In member function 'virtual void LAMMPS_NS::PPPMDipole::slabcorr()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:2392:12: warning: unused variable 'x' [-Wunused-variable]
   double **x = atom->x;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:2393:10: warning: unused variable 'zprd' [-Wunused-variable]
   double zprd = domain->zprd;
          ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_disp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_disp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp: In member function 'virtual void LAMMPS_NS::PPPMDipoleSpin::slabcorr()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp:666:12: warning: unused variable 'x' [-Wunused-variable]
   double **x = atom->x;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp:667:10: warning: unused variable 'zprd' [-Wunused-variable]
   double zprd = domain->zprd;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp:672:10: warning: unused variable 'spx' [-Wunused-variable]
   double spx,spy,spz;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp:672:14: warning: unused variable 'spy' [-Wunused-variable]
   double spx,spy,spz;
              ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_disp_tip4p.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/fix_qeq_comb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/fix_qeq_comb.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_adp.cpp.o
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[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/fix_qeq_comb.cpp: In member function 'virtual void LAMMPS_NS::FixQEQComb::post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/fix_qeq_comb.cpp:163:32: warning: 'ilist' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,ii,iloop,loopmax,inum,*ilist;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/fix_qeq_comb.cpp:163:26: warning: 'inum' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,ii,iloop,loopmax,inum,*ilist;
                          ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo_morse.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:3394:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:3395:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_adp.cpp:629:66: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fp,filename,file->nr,&file->z2r[i][j][1]);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::TORSION(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:1236:64: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ev_tally4(i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl);
                                                                ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp: In member function 'virtual void LAMMPS_NS::PairATM::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp:313:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp:316:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&nu[i][j][k],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp: In member function 'virtual void LAMMPS_NS::PairATM::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp:341:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp:342:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_triple,sizeof(double),1,fp);
                                           ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp: In member function 'void LAMMPS_NS::PairBOP::read_table(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:4979:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);  // skip first comment line
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:4980:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:4985:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5014:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5082:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);  // skip first comment line
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5084:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5086:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5090:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5095:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5099:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5101:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5103:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5112:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5119:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5123:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5127:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5129:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5133:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5135:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5139:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5141:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5145:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5147:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5151:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5153:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5157:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5159:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5161:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5170:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5177:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5185:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5193:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5201:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5208:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5212:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5229:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Spbicubic(double, double, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:4171:49: warning: 'yn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (j > 0) df[1] += c * ((double) j) * xn * yn1;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Sptricubic(double, double, double, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:4211:46: warning: 'zn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (k > 0) df[2] += c * kr * xn * yn * zn1;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5220:5: warning: 'nws' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(nws==3) {
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:4965:13: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,j,k,n,m;
             ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::read_lib()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:326:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:327:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:338:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:350:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:358:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:366:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:375:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLIB,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:384:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:391:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLIB,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:404:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:422:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:431:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
              fgets(s,MAXLIB,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:446:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:464:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:473:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(s,MAXLIB,fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:488:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:506:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:515:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(s,MAXLIB,fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::FLJ(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:806:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair = dC*dwij / rij;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:850:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:845:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:845:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:850:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:821:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:817:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkjS / rikS;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:840:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:845:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:850:45: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:845:45: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:821:40: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:840:45: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:876:76: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
             v_tally4(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS);
                                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:876:76: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::comb_zetaterm_d(double, double, double, double, double, double*, double, double*, double, double*, double*, double*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:2309:44: warning: 'com6' may be used uninitialized in this function [-Wmaybe-uninitialized]
             {com6+=prefac_ij2*pcrossk*dfc_k;}
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp: In member function 'double LAMMPS_NS::PairBOP::sigmaBo(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1758:42: warning: 'dis_jk[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1758:62: warning: 'dis_jk[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1759:35: warning: 'dis_jk[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         +dis_ik[2]*dis_jk[2])/(r_ik*r_jk);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1770:51: warning: 'r_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     dcA_ikj[2][1]=(-dis_ik[2]*r_ik*r_jk-cosAng_ikj
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1495:38: warning: 'temp_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
             bt_sg[nb_jk].temp=temp_jk;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:3636:30: warning: 'temp_ji' may be used uninitialized in this function [-Wmaybe-uninitialized]
               else if(temp_kk==temp_ji&&setting==0) {
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::force_zeta(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double, double, double, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, int, double&, double, double, int, int, int, double, double, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:1794:48: warning: 'prady' may be used uninitialized in this function [-Wmaybe-uninitialized]
      prady  += 1.0 *  btor[2] * bbtor * att_eng;
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:1793:48: warning: 'pradx' may be used uninitialized in this function [-Wmaybe-uninitialized]
      pradx  += 1.0 *  btor[1] * bbtor * att_eng;
                                                ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::direct(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, int, int, int, double, double, double, double, double, double, double, double, double&, double&, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:2799:20: warning: 'dcurlji' may be used uninitialized in this function [-Wmaybe-uninitialized]
    smf1n += dcurlji*iq*(afbn-fafbnl)*esucon/r;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:2802:20: warning: 'dcurlij' may be used uninitialized in this function [-Wmaybe-uninitialized]
    smf1j += dcurlij*jq*(afbj-fafbnl)*esucon/r;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp: In member function 'virtual void LAMMPS_NS::PairEAM::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp:469:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp:470:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp:472:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp: In member function 'void LAMMPS_NS::PairEAM::grab(FILE*, int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp:787:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloy::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:191:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:204:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFS::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:193:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp: In member function 'virtual void LAMMPS_NS::PairEAMCD::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp:386:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair += D_i * rhojp * t1;
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp: In member function 'int LAMMPS_NS::PairEIM::grabpair(FILE*, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp:969:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(line,MAXLINE,fptr);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp:973:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(line,MAXLINE,fptr);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:209:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw_zbl.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_nb3b_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_nb3b_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_nb3b_harmonic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp: In member function 'void LAMMPS_NS::PairLCBOP::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:981:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:987:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:988:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:989:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&gamma_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:990:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&A);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:991:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:992:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:993:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&alpha);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:994:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:995:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:996:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&d);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:997:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:998:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_4);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:999:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_6);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1000:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&L);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1001:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&kappa);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1002:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_0);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1003:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1004:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_0);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1005:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1_LR);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1006:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2_LR);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1007:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1008:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1009:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1010:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1011:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&lambda_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1012:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&lambda_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1013:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1014:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&delta);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1017:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1026:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(s,MAXLINE,fp);
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1033:40: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         while (1) { fgets(s,MAXLINE,fp); if (s[0] != '#') break; }
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1040:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1046:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_rebo.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_rebo.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_rebo.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:576:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:577:60: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     while (line == strchr(line,'#')) fgets(line,MAXLINE,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:593:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:611:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:647:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'void LAMMPS_NS::PairPolymorphic::grab(FILE*, int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:878:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_sw.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_sw.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff_mod.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:259:7: warning: 'emb' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (emb > epsilon) {
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:287:82: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally(i,i,nlocal,newton_pair,evdwl,0.0,0.0,delx,dely,delz);
                                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:287:82: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:287:82: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
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[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_atom_swap.cpp: In member function 'int LAMMPS_NS::FixAtomSwap::attempt_semi_grand()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_atom_swap.cpp:384:54: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
         atom->v[i][0] *= sqrt_mass_ratio[itype][jtype];
                                                      ^
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_tfmc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_tfmc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_tfmc.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp: In member function 'virtual void LAMMPS_NS::FixBondSwap::post_integrate()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:628:44: warning: 'jlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jangle = 0; jangle < num_angle[jlast]; jangle++) {
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:606:44: warning: 'jprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jangle = 0; jangle < num_angle[jprev]; jangle++) {
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:201:25: warning: 'jnext' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:617:44: warning: 'ilast' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (iangle = 0; iangle < num_angle[ilast]; iangle++) {
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:490:39: warning: 'iprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (iprev >= 0) iprevtag = tag[iprev];
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:201:7: warning: 'inext' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:413:53: warning: 'jnextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(jnextangletype,i,jnext,jlast) +
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:418:49: warning: 'jangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(jangletype,jprev,j,jnext) -
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:417:53: warning: 'inextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(inextangletype,i,inext,ilast) -
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:412:56: warning: 'iangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             delta += angle_eng(iangletype,iprev,i,jnext) +
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:456:37: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jbond = 0; jbond < num_bond[j]; jbond++)
                                     ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/fix_client_md.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/fix_client_md.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/fix_client_md.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:348:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:352:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:353:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:381:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:382:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&max_cell_size,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:383:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:384:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:385:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp: In member function 'double LAMMPS_NS::FixGCMC::energy_full()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp:2293:11: warning: 'imolecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (imolecule == molecule[j]) continue;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp: In member function 'void LAMMPS_NS::Message::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp:64:3: warning: 'clientserver' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (clientserver == 1) {
   ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_md.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_md.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_md.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp: In member function 'void LAMMPS_NS::Server::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp:43:3: warning: 'protocol' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (protocol == MD) {
   ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/compute_msd_nongauss.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/compute_msd_nongauss.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/compute_msd_nongauss.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp: In member function 'void LAMMPS_NS::ServerMC::loop()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:116:28: warning: 'xold[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
           x[m][2] = xold[2];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:115:28: warning: 'xold[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
           x[m][1] = xold[1];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:114:28: warning: 'xold[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
           x[m][0] = xold[0];
                            ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:15:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom.h:301:57: warning: 'atomid' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else if (map_style == 2) return map_find_hash(global);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:42:10: note: 'atomid' was declared here
   tagint atomid;
          ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/compute_ti.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/compute_ti.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/compute_ti.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_deposit.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_deposit.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_deposit.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_efield.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_efield.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_efield.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'int sizeofint(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:558:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   while (size >= num && num_of_bits < 32) {
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'int sizeofints(int, unsigned int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:599:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   while (bytes[num_of_bytes] >= num) {
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'void sendints(int*, int, int, unsigned int*, unsigned int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:653:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   if (num_of_bits >= num_of_bytes * 8) {
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:654:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (i = 0; i < num_of_bytes; i++) {
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:659:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (i = 0; i < num_of_bytes-1; i++) {
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'int receivebits(int*, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:694:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (lastbits < num_of_bits) {
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'int xdr3dfcoord(XDR*, float*, int*, float*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:396:54: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define LASTIDX (sizeof(magicints) / sizeof(int) - 1 )
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:934:23: note: in expansion of macro 'LASTIDX'
     while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:45:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:938:14: note: in expansion of macro 'MYMIN'
     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:45:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:1114:14: note: in expansion of macro 'MYMIN'
     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
              ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:1140:54: warning: 'bitsizeint[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[2] = receivebits(buf, bitsizeint[2]);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:1139:54: warning: 'bitsizeint[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[1] = receivebits(buf, bitsizeint[1]);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:1138:54: warning: 'bitsizeint[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[0] = receivebits(buf, bitsizeint[0]);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_deposit.cpp: In member function 'virtual void LAMMPS_NS::FixDeposit::pre_exchange()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_deposit.cpp:529:56: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else atom->avec->create_atom(ntype+onemols[imol]->type[m],coords[m]);
                                                        ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_gld.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_gld.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_gld.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_oneway.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_oneway.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_oneway.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_orient_bcc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_orient_bcc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_orient_bcc.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp: In member function 'virtual void LAMMPS_NS::FixEvaporate::pre_exchange()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp:322:31: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         } else if (me == proc && i == iatom) {
                               ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_orient_fcc.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:321:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:325:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:326:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:327:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:328:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:329:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:359:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:360:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:361:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:362:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:372:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:376:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:377:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:378:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:379:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:380:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:381:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:413:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:414:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:415:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:416:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:417:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/xdr_compat.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/xdr_compat.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/xdr_compat.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:477:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:149:58: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                         r0n[itype][jtype]*rninv -
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:151:58: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                         r0m[itype][jtype]*rminv) -
                                                          ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:416:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:420:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:421:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:422:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:423:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:424:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:457:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:458:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:459:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:460:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:461:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:462:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:463:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:549:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:549:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:552:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:547:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:559:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:182:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:187:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:192:50: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (mm[itype][jtype]*r0n[itype][jtype]*rninv -
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:193:50: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:184:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:184:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_delta.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_delta.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_delta.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp: In member function 'virtual void LAMMPS_NS::AngleCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp:248:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp:249:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp:250:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k_ub[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp:251:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r_ub[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp: In member function 'virtual void LAMMPS_NS::AngleCosine::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp:196:70: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (comm->me == 0) fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                                      ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp: In member function 'virtual void LAMMPS_NS::AngleCosinePeriodic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp:249:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp:250:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b[1],sizeof(int),atom->nangletypes,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp:251:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineSquared::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp:218:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp:219:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp: In member function 'virtual void LAMMPS_NS::AngleHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp:218:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp:219:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_angle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_angle.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_bond.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_bond.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_bond.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp: In member function 'virtual void LAMMPS_NS::AngleTable::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp:312:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp:313:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_full.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_full.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_full.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_molecular.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_molecular.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_molecular.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_template.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_template.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_template.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp: In member function 'virtual void LAMMPS_NS::BondFENE::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp:218:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp:219:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp:220:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp:221:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp: In member function 'virtual void LAMMPS_NS::BondFENEExpand::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:227:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:228:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:229:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:230:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:231:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp: In member function 'virtual void LAMMPS_NS::BondGromos::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp:169:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp:170:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp:170:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp:171:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp: In member function 'virtual void LAMMPS_NS::BondMorse::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp:174:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&d0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp:175:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp:176:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp: In member function 'virtual void LAMMPS_NS::BondNonlinear::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp:169:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp:170:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp:171:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&lamda[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp: In member function 'virtual void LAMMPS_NS::BondQuartic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:278:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:279:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b1[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:280:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b2[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:281:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&rc[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:282:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&u0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp: In member function 'virtual void LAMMPS_NS::BondTable::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp:255:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp:256:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:426:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:427:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:428:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:429:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:430:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weightflag,sizeof(int),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmmfsw::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:469:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:470:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:471:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:472:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:473:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weightflag,sizeof(int),1,fp);
                                        ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp:330:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp:331:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sign[1],sizeof(int),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp:332:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/fix_cmap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/fix_cmap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/fix_cmap.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp: In member function 'virtual void LAMMPS_NS::DihedralHelix::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp:325:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp:326:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp:327:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralMultiHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:321:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:322:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:323:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:324:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a4[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:325:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a5[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp: In member function 'virtual void LAMMPS_NS::DihedralOPLS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp:333:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp:334:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp:335:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp:336:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:336:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:337:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sign[1],sizeof(int),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:338:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->nimpropertypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp:277:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp:278:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:206:15: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       pd = -pd;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:205:18: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
       p = 2.0 - p;
                  ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp: In member function 'virtual void LAMMPS_NS::ImproperUmbrella::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp:318:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kw[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp:319:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&w0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp:320:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp:298:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (donor_flag == 0) type2param[i][j][k] = nparams;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp:149:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp:119:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:377:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:381:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:382:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:383:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:384:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:438:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:439:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:440:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_inner,sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:441:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:442:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:443:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingLJ::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp:508:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else k = atom->map(klist[kk]+tagprev);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingMorse::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp:411:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else k = atom->map(klist[kk]+tagprev);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmm::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:500:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:166:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:198:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:131:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:131:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp:371:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (donor_flag == 0) type2param[i][j][k] = nparams;
         ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/atom_vec_peri.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:435:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:439:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:440:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:441:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:442:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:472:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:473:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:474:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:475:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:476:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:477:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:504:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:505:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:506:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:507:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:508:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:510:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:620:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:624:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:625:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:626:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:662:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:663:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:664:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:665:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:666:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:668:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:669:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:670:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:671:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:672:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:532:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       philj6 = -lj4[itype][jtype]*r6inv +
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:527:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:194:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl6 = -lj4[itype][jtype]*r6inv +
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:192:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl12 = r6inv*lj3[itype][jtype]*r6inv -
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:335:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:334:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:262:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:258:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_damage_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_damage_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_damage_atom.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:377:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:376:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:304:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:300:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_plasticity_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_plasticity_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_plasticity_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeDilatationAtom::compute_peratom()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp:104:11: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
   double *theta;
           ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/fix_peri_neigh.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/fix_peri_neigh.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/fix_peri_neigh.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriEPS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:567:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:571:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:572:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:573:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:574:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:575:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:576:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_yieldstress[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriLPS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:492:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:496:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:497:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:498:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:499:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:500:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp: In member function 'virtual void LAMMPS_NS::PairPeriPMB::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:421:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:425:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&kspring[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:426:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:427:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:428:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_dynamic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_dynamic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_dynamic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp: In member function 'virtual void LAMMPS_NS::PairPeriVES::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:550:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:554:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:555:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:556:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:557:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:558:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:559:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_lambdai[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:560:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_taubi[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp: In member function 'virtual int LAMMPS_NS::FixQEq::pack_forward_comm(int, int*, double*, int, int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp:480:10: warning: 'm' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return m;
          ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_fire.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_fire.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_fire.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp: In member function 'void LAMMPS_NS::FixPOEMS::readfile(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp:985:26: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (me == 0) fclose(fp);
                          ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_point.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_local.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_local.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/hyper.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp: In member function 'virtual void LAMMPS_NS::FixHyperGlobal::pre_reverse(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp:305:20: warning: 'r0max' may be used uninitialized in this function [-Wmaybe-uninitialized]
     fbiasr = fbias / r0max / rmax;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp:305:34: warning: 'rmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
     fbiasr = fbias / r0max / rmax;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp:226:18: warning: 'jmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,j,m,imax,jmax;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp:226:13: warning: 'imax' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,j,m,imax,jmax;
             ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/neb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/neb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/neb.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/prd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/prd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/prd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_local.cpp: In member function 'virtual void LAMMPS_NS::FixHyperLocal::pre_reverse(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_local.cpp:479:27: warning: 'ijhalf' may be used uninitialized in this function [-Wmaybe-uninitialized]
     maxhalf[iold] = ijhalf;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp: In member function 'virtual void LAMMPS_NS::FixNEB::min_post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp:615:45: warning: 'lenuntilIm' may be used uninitialized in this function [-Wmaybe-uninitialized]
       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp:615:45: warning: 'idealPos' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp:615:58: warning: 'meanDist' may be used uninitialized in this function [-Wmaybe-uninitialized]
       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
                                                          ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/tad.cpp.o
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[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/temper.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nh.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_ehex.cpp: In member function 'virtual void LAMMPS_NS::FixEHEX::init()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_ehex.cpp:198:48: warning: 'id_shake' may be used uninitialized in this function [-Wmaybe-uninitialized]
      fshake = ((FixShake*) modify->fix[id_shake]);
                                                ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nh_small.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nh_small.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nh_small.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In constructor 'LAMMPS_NS::FixRigid::FixRigid(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:579:51: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (langflag) random = new RanMars(lmp,seed + me);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:396:30: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][2] = zflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:395:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][1] = yflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:394:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][0] = xflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:358:34: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (domain->dimension == 2 && zflag == 1.0)
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:364:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fflag[m-1][1] = yflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:363:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fflag[m-1][0] = xflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:224:32: warning: 'molecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (custom_flag) delete [] molecule;
                                ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph_small.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph_small.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph_small.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_npt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_npt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_npt.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_npt_small.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_npt_small.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_npt_small.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_xv()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1482:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1477:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1461:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1405:50: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1404:60: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1404:50: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                  ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nve.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nve.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nve.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_v()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1627:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1614:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1576:40: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x1 = x[i][1] + ybox*yprd + zbox*yz;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1575:50: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1575:40: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                        ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nve_small.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nve_small.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nve_small.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2223:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           radone = lbonus[line[i]].length;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::readfile(int, double*, double**, double**, double**, LAMMPS_NS::imageint*, int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2296:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_static()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2122:32: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (inpfile && inbody[ibody]) continue;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2103:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2020:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         orient[i][0] = lbonus[line[i]].theta - theta_body;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2085:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt_small.cpp.o
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[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_append_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_append_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_append_atoms.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_msst.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_msst.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_msst.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_nphug.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_nphug.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_nphug.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidSmall::write_restart_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2659:26: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (me == 0) fclose(fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_xv()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1394:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1389:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1374:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_wall_piston.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_wall_piston.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_wall_piston.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_v()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1532:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1519:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In constructor 'LAMMPS_NS::FixRigidSmall::FixRigidSmall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:515:57: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (langflag) random = new RanMars(lmp,seed + comm->me);
                                                         ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/atom_vec_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/atom_vec_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/atom_vec_spin.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2380:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           radone = lbonus[line[i]].length;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::readfile(int, double**, int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2466:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
                                                                   ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/compute_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/compute_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/compute_spin.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_static()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2264:32: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (inpfile && inbody[ibody]) continue;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2242:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2157:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         orient[i][0] = lbonus[line[i]].theta - theta_body;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2224:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/fix_langevin_spin.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/min_spin.cpp: In member function 'void LAMMPS_NS::MinSpin::advance_spins(double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/min_spin.cpp:245:10: warning: unused variable 'msq' [-Wunused-variable]
   double msq,scale,fm2,energy,dts2;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/min_spin.cpp:245:14: warning: unused variable 'scale' [-Wunused-variable]
   double msq,scale,fm2,energy,dts2;
              ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleCut::compute_single_pair(int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:326:8: warning: unused variable 'ilist' [-Wunused-variable]
   int *ilist,*jlist,*numneigh,**firstneigh;  
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:503:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:507:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
    fread(&cut_spin_long[i][j],sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:532:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_long_global,sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:533:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleLong::compute_single_pair(int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:360:8: warning: variable 'ilist' set but not used [-Wunused-but-set-variable]
   int *ilist,*jlist,*numneigh,**firstneigh;  
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:572:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:576:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_long[i][j],sizeof(int),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:601:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_long_global,sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:602:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDmi::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:535:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:539:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&DM[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:540:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_dmx[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:541:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_dmy[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:542:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_dmz[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:543:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&vmech_dmx[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:544:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&vmech_dmy[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:545:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&vmech_dmz[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:546:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_dmi[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDmi::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:580:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_dmi_global,sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:581:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:582:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp: In member function 'virtual void LAMMPS_NS::PairSpinExchange::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:500:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:504:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&J1_mag[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:505:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&J1_mech[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:506:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&J2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:507:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&J2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:508:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_exchange[i][j],sizeof(double),1,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp: In member function 'virtual void LAMMPS_NS::PairSpinExchange::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:539:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_exchange_global,sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:540:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:541:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_sna_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_sna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_sna_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp: In member function 'virtual void LAMMPS_NS::PairSpinMagelec::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:519:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:523:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&ME[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:524:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_mex[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:525:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_mey[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:526:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_mez[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:527:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_magelec[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp: In member function 'virtual void LAMMPS_NS::PairSpinMagelec::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:557:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_magelec_global,sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:558:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:559:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snad_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snad_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snad_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp: In member function 'virtual void LAMMPS_NS::PairSpinNeel::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:690:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:694:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&g1[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:695:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&g1_mech[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:696:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&g2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:697:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&g2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:698:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&q1[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:699:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&q1_mech[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:700:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&q2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:701:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&q2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:702:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_neel[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp: In member function 'virtual void LAMMPS_NS::PairSpinNeel::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:736:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_neel_global,sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:737:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:738:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snav_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snav_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snav_atom.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp: In member function 'void LAMMPS_NS::PairSNAP::compute_bispectrum()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp:276:15: warning: unused variable 'numneigh' [-Wunused-variable]
   int *jlist,*numneigh,**firstneigh;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp:276:26: warning: unused variable 'firstneigh' [-Wunused-variable]
   int *jlist,*numneigh,**firstneigh;
                          ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp: In member function 'void LAMMPS_NS::SNA::compute_zi()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:351:7: warning: unused variable 'ma2' [-Wunused-variable]
   int ma2, mb2;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:351:12: warning: unused variable 'mb2' [-Wunused-variable]
   int ma2, mb2;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp: In member function 'void LAMMPS_NS::SNA::compute_yi(const double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:436:9: warning: unused variable 'mb' [-Wunused-variable]
     int mb = (2 * (mb1min+mb2max) - j1 - j2 + j) / 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:437:9: warning: unused variable 'ma' [-Wunused-variable]
     int ma = (2 * (ma1min+ma2max) - j1 - j2 + j) / 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:408:7: warning: unused variable 'j' [-Wunused-variable]
   int j;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:409:7: warning: unused variable 'jjz' [-Wunused-variable]
   int jjz;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:423:7: warning: unused variable 'ma2' [-Wunused-variable]
   int ma2, mb2;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:423:12: warning: unused variable 'mb2' [-Wunused-variable]
   int ma2, mb2;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp: In member function 'void LAMMPS_NS::SNA::compute_deidrj(double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:550:11: warning: unused variable 'ma' [-Wunused-variable]
       int ma = mb;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp: In member function 'void LAMMPS_NS::SNA::compute_dbidrj()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:709:11: warning: unused variable 'ma' [-Wunused-variable]
       int ma = mb;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:759:11: warning: unused variable 'ma' [-Wunused-variable]
       int ma = mb;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:809:11: warning: unused variable 'ma' [-Wunused-variable]
       int ma = mb;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:659:12: warning: unused variable 'jjjzarray_r' [-Wunused-variable]
   double** jjjzarray_r;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:660:12: warning: unused variable 'jjjzarray_i' [-Wunused-variable]
   double** jjjzarray_i;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:661:10: warning: unused variable 'jjjmambzarray_r' [-Wunused-variable]
   double jjjmambzarray_r;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:662:10: warning: unused variable 'jjjmambzarray_i' [-Wunused-variable]
   double jjjmambzarray_i;
          ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/fix_store_kim.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/fix_store_kim.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/fix_store_kim.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp: In constructor 'LAMMPS_NS::FixWallSRD::FixWallSRD(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp:65:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_static()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2965:25: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       c1 = tbonus[tri[i]].c1;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2953:30: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       length = lbonus[line[i]].length;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2937:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = ebonus[ellipsoid[i]].shape;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_dynamic()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:3048:30: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       inertia = tbonus[tri[i]].inertia;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:3035:40: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       biglist[k].theta = lbonus[line[i]].theta;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:3023:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = ebonus[ellipsoid[i]].shape;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp: In member function 'void LAMMPS_NS::KimInit::do_init(char*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp:294:7: warning: variable 'kimerror' set but not used [-Wunused-but-set-variable]
   int kimerror;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::reset_velocities()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1016:33: warning: 'dof_tstat' may be used uninitialized in this function [-Wmaybe-uninitialized]
       tbin = vbin[i].value[0]/(n-dof_tstat) * tfactor;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp: In member function 'void LAMMPS_NS::KimQuery::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:92:9: warning: variable 'varname' set but not used [-Wunused-but-set-variable]
   char *varname, *function, *value;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:92:19: warning: variable 'function' set but not used [-Wunused-but-set-variable]
   char *varname, *function, *value;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:92:30: warning: unused variable 'value' [-Wunused-variable]
   char *varname, *function, *value;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:98:10: warning: variable 'model_name' set but not used [-Wunused-but-set-variable]
   char * model_name;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:108:8: warning: variable 'split' set but not used [-Wunused-but-set-variable]
   bool split = false;
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::parameterize()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2682:37: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double *c1 = tbonus[tri[i]].c1;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2702:41: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double length = lbonus[line[i]].length;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2699:46: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double *shape = ebonus[ellipsoid[i]].shape;
                                              ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp: In member function 'void LAMMPS_NS::KimInteractions::do_setup(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp:147:5: warning: 'fixed_types' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (!fixed_types) {
     ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/pair_kim.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/pair_kim.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/pair_kim.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp: In function 'double {anonymous}::get_temperature_conversion_factor({anonymous}::units, {anonymous}::units)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp:1019:10: warning: unused variable 'to_si' [-Wunused-variable]
   double to_si;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::collisions_multi()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1547:33: warning: 'xbcollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[2] = xbcollfirst[2];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1546:33: warning: 'xbcollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[1] = xbcollfirst[1];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1545:33: warning: 'xbcollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[0] = xbcollfirst[0];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1544:33: warning: 'xscollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[2] = xscollfirst[2];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1543:33: warning: 'xscollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[1] = xscollfirst[1];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1542:33: warning: 'xscollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[0] = xscollfirst[0];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1550:29: warning: 'normfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[2] = normfirst[2];
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1549:29: warning: 'normfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[1] = normfirst[1];
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1548:29: warning: 'normfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[0] = normfirst[0];
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1575:32: warning: 'typefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (collidestyle == SLIP && type == SPHERE)
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1580:33: warning: 'jfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
         force_wall(v[i],vsnew,j);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp:88:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp:105:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
              ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/pair_python.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/pair_python.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/pair_python.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::init()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:139:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_init, NULL);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:157:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_initial_integrate, arglist);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:175:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_final_integrate, NULL);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate_respa(int, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:193:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_initial_integrate_respa, arglist);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate_respa(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:212:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_final_integrate_respa, arglist);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::reset_dt()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:230:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_reset_dt, NULL);
              ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp.o
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[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_atom_mpiio.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_atom_mpiio.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_atom_mpiio.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_cfg_mpiio.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_cfg_mpiio.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_cfg_mpiio.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp: In member function 'int LAMMPS_NS::PythonImpl::create_entry(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp:412:47: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   else if (format && strlen(format) != ninput+noutput)
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp: In member function 'virtual void LAMMPS_NS::PythonImpl::invoke_function(int, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp:322:36: warning: 'pValue' may be used uninitialized in this function [-Wmaybe-uninitialized]
     PyTuple_SetItem(pArgs,i,pValue);
                                    ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_custom_mpiio.cpp.o
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[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp: In member function 'void LAMMPS_NS::ComputeVoronoi::processCell(voro::voronoicell_neighbor&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp:514:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for (j=0; j<narea.size(); ++j)
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp:529:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       if (neighs != narea.size())
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp:546:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         for( j=0; j<vlist.size(); j+=vlist[j]+1 ) {
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp:590:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       if (neighs != narea.size())
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'double LAMMPS_NS::ComputePressureBocs::get_cg_p_corr(double**, int, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp:250:10: warning: 'correction' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return correction;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'virtual double LAMMPS_NS::ComputePressureBocs::compute_scalar()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp:347:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       scalar = (temperature->dof * boltz * t +
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'virtual void LAMMPS_NS::ComputePressureBocs::compute_vector()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp:394:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
                               ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna2_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna2_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna2_fene.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/fix_nve_dot.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/fix_nve_dot.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/fix_nve_dot.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp: In member function 'virtual void LAMMPS_NS::BondOxdnaFene::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp:382:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp:383:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&Delta[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp:384:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/fix_nve_dotc_langevin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/fix_nve_dotc_langevin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/fix_nve_dotc_langevin.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:685:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:832:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:837:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&k_cxst[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:838:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_0[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:839:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_c[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:840:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_lo[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:841:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_hi[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:842:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_lc[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:843:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_hc[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:844:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst_lo[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:845:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst_hi[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:847:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:848:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst1_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:849:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst1_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:850:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:851:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst1_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:853:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:854:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst4_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:855:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst4_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:856:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:857:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst4_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:859:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst5[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:860:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst5_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:861:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst5_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:862:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst5[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:863:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst5_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:865:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst6[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:866:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst6_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:867:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst6_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:868:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst6[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:869:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst6_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:871:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&AA_cxst1[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:872:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&BB_cxst1[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:936:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:937:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:938:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_excv.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_excv.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_excv.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:367:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:453:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:458:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&kappa_dh[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:459:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&qeff_dh_pf[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:460:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_dh[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:461:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_dh_ast[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:462:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_dh_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:495:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:496:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:497:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:831:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:991:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:996:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&k_cxst[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:997:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_0[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:998:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_c[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:999:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_lo[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1000:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_hi[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1001:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_lc[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1002:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_hc[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1003:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst_lo[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1004:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst_hi[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1006:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1007:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst1_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1008:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst1_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1009:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1010:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst1_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1012:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1013:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst4_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1014:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst4_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1015:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1016:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst4_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1018:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst5[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1019:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst5_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1020:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst5_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1021:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst5[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1022:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst5_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1024:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst6[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1025:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst6_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1026:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst6_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1027:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst6[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1028:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst6_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1030:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst3p[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1031:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_cxst3p_ast[i][j],sizeof(double),1,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1032:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst3p[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1033:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_cxst3p_c[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1034:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst4p[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1035:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_cxst4p_ast[i][j],sizeof(double),1,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1036:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst4p[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1037:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_cxst4p_c[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1107:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1108:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1109:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:571:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:713:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:718:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_ss[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:719:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_ss[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:720:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_ss_ast[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:721:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_ss[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:722:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_ss_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:723:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_sb[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:724:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_sb[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:725:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_sb_ast[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:726:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_sb[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:727:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_sb_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:728:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_bb[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:729:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_bb[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:730:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_bb_ast[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:731:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_bb[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:732:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_bb_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:775:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:776:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:777:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:797:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:976:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:981:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_hb[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:982:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:983:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_0[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:984:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:985:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_lo[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:986:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_hi[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:987:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_lc[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:988:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_hc[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:989:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb_lo[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:990:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb_hi[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:991:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shift_hb[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:993:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb1[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:994:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb1_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:995:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb1_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:996:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb1[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:997:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb1_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:999:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb2[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1000:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb2_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1001:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb2_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1002:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb2[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1003:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb2_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1005:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb3[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1006:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb3_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1007:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb3_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1008:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb3[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1009:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb3_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1011:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb4[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1012:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb4_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1013:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb4_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1014:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb4[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1015:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb4_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1017:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb7[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1018:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb7_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1019:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb7_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1020:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb7[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1021:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb7_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1023:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb8[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1024:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb8_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1025:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb8_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1026:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb8[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1027:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb8_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1102:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1103:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1104:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:920:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1082:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1087:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_st[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1088:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1089:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_0[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1090:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1091:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_lo[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1092:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_hi[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1093:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_lc[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1094:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_hc[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1095:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st_lo[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1096:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st_hi[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1097:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shift_st[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1099:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st4[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1100:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_st4_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1101:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st4_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1102:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st4[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1103:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st4_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1105:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st5[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1106:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_st5_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1107:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st5_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1108:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st5[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1109:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st5_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1111:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st6[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1112:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_st6_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1113:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st6_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1114:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st6[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1115:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st6_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1117:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st1[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1118:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_st1_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1119:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st1[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1120:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_st1_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1121:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st2[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1122:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_st2_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1123:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st2[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1124:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_st2_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1190:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1191:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1192:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:785:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:950:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:955:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&k_xst[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:956:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_0[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:957:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_c[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:958:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_lo[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:959:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_hi[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:960:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_lc[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:961:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_hc[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:962:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst_lo[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:963:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst_hi[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:965:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst1[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:966:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst1_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:967:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst1_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:968:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst1[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:969:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst1_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:971:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst2[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:972:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst2_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:973:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst2_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:974:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst2[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:975:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst2_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:977:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst3[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:978:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst3_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:979:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst3_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:980:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst3[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:981:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst3_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:983:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst4[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:984:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst4_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:985:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst4_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:986:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst4[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:987:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst4_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:989:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst7[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:990:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst7_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:991:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst7_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:992:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst7[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:993:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst7_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:995:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst8[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:996:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst8_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:997:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst8_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:998:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst8[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:999:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst8_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1072:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1073:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1074:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_edpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_edpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_edpd.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_mdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_mdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_mdpd.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_tdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_tdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_tdpd.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/compute_edpd_temp_atom.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd_rhosum.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd_rhosum.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:455:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:459:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:460:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:461:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&power[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:462:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:463:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&kappa[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:464:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&powerT[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:465:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cutT[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:468:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&sc[i][j][k],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:472:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&kc[i][j][k],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:510:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:511:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:512:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp: In member function 'virtual void LAMMPS_NS::PairMDPD::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:350:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:354:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&A_att[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:355:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&B_rep[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:356:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:357:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:358:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_r[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp: In member function 'virtual void LAMMPS_NS::PairMDPD::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:388:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&temperature,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:389:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:390:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:391:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:221:34: warning: 'dQr' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Q[j]    -= ( dQc - dQd + dQr );
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:221:28: warning: 'dQd' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Q[j]    -= ( dQc - dQd + dQr );
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:221:28: warning: 'dQc' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp: In member function 'virtual void LAMMPS_NS::PairTDPD::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:397:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:401:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:402:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:403:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&power[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:404:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:405:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cutcc[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:407:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&kappa[i][j][k],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:408:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&epsilon[i][j][k],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:409:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&powercc[i][j][k],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp: In member function 'virtual void LAMMPS_NS::PairTDPD::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:445:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&temperature,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:446:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:447:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:448:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp: In member function 'virtual void LAMMPS_NS::AngleSDK::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp:335:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp:336:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp:337:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&repscale[1],sizeof(double),atom->nangletypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDK::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:376:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:380:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lj_type[i][j],sizeof(int),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:381:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:382:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:383:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDK::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:413:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:414:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:415:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:416:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDKCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:468:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:472:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lj_type[i][j],sizeof(int),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:473:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:474:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:475:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDKCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:507:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:508:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:509:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:510:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:511:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:512:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:513:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/colvarproxy_lammps.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/colvarproxy_lammps.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/colvarproxy_lammps.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp: In member function 'virtual void LAMMPS_NS::FixColvars::setup(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp:558:33: warning: unused variable 'id' [-Wunused-variable]
     std::vector<int>           &id = *(proxy->modify_atom_ids());
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp: In function 'void write_group(FILE*, int, LAMMPS_NS::Atom*, LAMMPS_NS::Group*, int, int, MPI_Comm, FILE*, FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp:131:25: warning: 'recvlist' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (num > 0) delete[] recvlist;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp: In member function 'void LAMMPS_NS::Group2Ndx::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp:165:80: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
       write_group(fp,gid,atom,group,comm->me,comm->nprocs,world,screen,logfile);
                                                                                ^
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_saed.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_saed.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_saed.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_xrd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_xrd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_xrd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp: In member function 'void LAMMPS_NS::Ndx2Group::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp:127:37: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
         name = find_section(fp,NULL);
                                     ^
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/atom_vec_dpd.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/compute_dpd.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_shardlow.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_shardlow.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_shardlow.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp: In member function 'void LAMMPS_NS::FixEOStable::read_table(LAMMPS_NS::FixEOStable::Table*, LAMMPS_NS::FixEOStable::Table*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:217:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:219:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:220:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:226:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:236:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:238:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp: In member function 'void LAMMPS_NS::FixEOStableRX::read_table(LAMMPS_NS::FixEOStableRX::Table*, LAMMPS_NS::FixEOStableRX::Table*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:436:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:438:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:439:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:445:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:473:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:475:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix.h:17:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:14:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp: In member function 'virtual void LAMMPS_NS::FixRX::post_constructor()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pointers.h:37:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define MAX(A,B) ((A) > (B) ? (A) : (B))
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:324:24: note: in expansion of macro 'MAX'
         tmpmaxstrlen = MAX(tmpmaxstrlen,strlen(word));
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp: In member function 'void LAMMPS_NS::FixRX::initSparse()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:549:59: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             if (sparseKinetics_inu[i][idx] >= nu_bin.size())
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:567:59: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             if (sparseKinetics_inu[i][idx] >= nu_bin.size())
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:583:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i = 1; i < nu_bin.size(); ++i)
                                     ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nbin_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nbin_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nbin_ssa.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nstencil_half_bin_2d_newton_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nstencil_half_bin_2d_newton_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nstencil_half_bin_2d_newton_ssa.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonSSA::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:207:54: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                        tag[j]-tagprev);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:205:68: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                   which = find_special(onemols[imol]->special[iatom],
                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:205:52: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                   which = find_special(onemols[imol]->special[iatom],
                                                    ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:316:7: warning: unused variable 'irequest' [-Wunused-variable]
   int irequest = neighbor->request(this,instance_me);
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:378:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:382:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:383:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:384:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:413:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&temperature,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:414:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:415:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:416:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:409:7: warning: unused variable 'irequest' [-Wunused-variable]
   int irequest = neighbor->request(this,instance_me);
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:479:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:483:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:484:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:485:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&kappa[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:486:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:516:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:517:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:518:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'virtual void LAMMPS_NS::PairExp6rx::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:971:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:975:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'virtual void LAMMPS_NS::PairExp6rx::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1001:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1002:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1003:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1004:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'void LAMMPS_NS::PairMultiLucy::read_table(LAMMPS_NS::PairMultiLucy::Table*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:365:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:367:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:368:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:374:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:387:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:389:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucy::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:708:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:709:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucy::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:177:24: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
         f[i][2] += delz*fpair;
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:189:52: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (rho[i]*rho[i] < tb->innersq || rho[j]*rho[j] < tb->innersq)
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'void LAMMPS_NS::PairExp6rx::getMixingWeights(int, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&) const':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1221:32: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1235:35: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1214:32: warning: 'nMolecules1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1228:35: warning: 'nMoleculesOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1221:5: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1235:5: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1214:5: warning: 'fraction1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1228:5: warning: 'fractionOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
     ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/compute_temp_drude.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/compute_temp_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/compute_temp_drude.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'void LAMMPS_NS::PairMultiLucyRX::read_table(LAMMPS_NS::PairMultiLucyRX::Table*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:510:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:512:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:513:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:519:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:532:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:534:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucyRX::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:853:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:854:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp: In member function 'void LAMMPS_NS::PairTableRX::getMixingWeights(int, double&, double&, double&, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:577:29: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2 = nMolecules2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:576:35: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2old = nMoleculesOld2;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:572:27: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2 = fraction2;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:571:33: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2old = fractionOld2;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:575:29: warning: 'nMolecules1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1 = nMolecules1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:574:35: warning: 'nMoleculesOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1old = nMoleculesOld1;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:570:27: warning: 'fraction1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1 = fraction1;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:569:33: warning: 'fractionOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1old = fractionOld1;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'void LAMMPS_NS::PairMultiLucyRX::getMixingWeights(int, double&, double&, double&, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1015:29: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2 = nMolecules2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1014:35: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2old = nMoleculesOld2;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1010:27: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2 = fraction2;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1009:33: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2old = fractionOld2;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1013:29: warning: 'nMolecules1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1 = nMolecules1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1012:35: warning: 'nMoleculesOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1old = nMoleculesOld1;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1008:27: warning: 'fraction1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1 = fraction1;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1007:33: warning: 'fractionOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1old = fractionOld1;
                                 ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_langevin_drude.cpp.o
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_langevin_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_langevin_drude.cpp
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:360:7: warning: unused variable 'irequest' [-Wunused-variable]
   int irequest = neighbor->request(this,instance_me);
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:491:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:495:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:496:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:497:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&polar[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:498:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&thole[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:500:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:536:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:537:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:538:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&thole_global,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:539:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:540:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:541:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:542:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:543:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:544:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp: In member function 'int LAMMPS_NS::FixDrudeTransform<inverse>::pack_forward_comm(int, int*, double*, int, int*) [with bool inverse = false]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp:294:13: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
             buf[m++] = x[j][2] + dz;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp: In member function 'int LAMMPS_NS::FixDrudeTransform<inverse>::pack_forward_comm(int, int*, double*, int, int*) [with bool inverse = true]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp:294:13: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutTholeLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:668:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:661:78: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (drudetype[type[i]] != NOPOL_TYPE && drudetype[type[j]] != NOPOL_TYPE &&
                                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:663:27: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul += factor_e * dcoul;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:663:27: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:657:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:657:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:660:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:655:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:226:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:227:33: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:190:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:227:33: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:219:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:224:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:221:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:232:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:222:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = qi*qj * table;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:221:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/atom_vec_electron.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/atom_vec_electron.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/atom_vec_electron.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_atom_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_atom_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_atom_eff.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_eff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp: In member function 'virtual void LAMMPS_NS::PairThole::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:314:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:318:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&polar[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:319:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&thole[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:320:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp: In member function 'virtual void LAMMPS_NS::PairThole::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:350:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&thole_global,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:351:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:352:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:353:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_temp_deform_eff.cpp.o
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[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_temp_eff.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/fix_adapt_fep.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/fix_adapt_fep.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/fix_adapt_fep.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp: In member function 'virtual void LAMMPS_NS::PairEffCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:968:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:971:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&cut[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp: In member function 'virtual void LAMMPS_NS::PairEffCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:995:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:996:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:997:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCutSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:275:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:279:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:280:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCutSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:309:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:310:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:312:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:313:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:314:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:362:80: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:297:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:301:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:328:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:329:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:331:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:332:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:333:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:372:82: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     prefactor = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:373:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:383:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:387:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:388:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:389:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:390:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:391:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:426:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:427:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:428:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:430:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:431:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:432:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:433:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:434:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:839:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:843:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:844:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:845:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:846:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:847:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:882:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:883:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:884:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:886:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:887:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:888:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:889:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:890:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:499:37: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:494:78: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e *lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:142:80: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                                ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:980:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (1.0/(denlj*denlj) - 1.0/denlj);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:972:81: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:973:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:526:71: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:547:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:548:66: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:547:58: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:547:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                                     ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:186:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (1.0/(denlj*denlj) - 1.0/denlj);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:179:70: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:180:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:399:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:403:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:404:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:405:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:406:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:440:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:441:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:442:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:444:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:445:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:446:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:447:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:448:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:522:37: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:516:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:515:81: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                 ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:158:70: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:159:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2Soft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:322:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:326:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:327:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:328:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:329:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2Soft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:361:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:362:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:363:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:364:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:365:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:366:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:379:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:383:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:384:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:385:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:386:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:387:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:422:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:423:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:424:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:426:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:427:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:428:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:429:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:430:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:795:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:799:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:800:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:801:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:802:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:836:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:837:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:838:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:840:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:841:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:842:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:843:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:844:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:496:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:491:79: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:147:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:143:80: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                                ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:926:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:918:81: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:919:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:491:71: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:507:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:508:66: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:507:58: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:507:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:656:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:660:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:661:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:662:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:663:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:696:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:697:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:699:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:700:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:701:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:702:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:174:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:167:70: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:168:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:754:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:519:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:520:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:521:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:522:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:523:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:525:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:526:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:527:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:528:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:529:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:411:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:391:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:390:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:318:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:314:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD/dump_h5md.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD/dump_h5md.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD/dump_h5md.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:315:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:319:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:320:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:321:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:322:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:323:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_manifoldforce.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_manifoldforce.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_manifoldforce.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:456:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:457:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:458:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:459:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:460:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:359:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:358:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:286:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:282:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_dens_final.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_dens_final.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_thylakoid.cpp: In member function 'virtual void LAMMPS_NS::user_manifold::manifold_thylakoid::checkup()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_thylakoid.cpp:62:65: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'std::vector<LAMMPS_NS::user_manifold::thyla_part*>::size_type {aka unsigned int}' [-Wformat=]
     fprintf(screen,"I have %ld parts. They are:\n", parts.size());
                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_thylakoid.cpp:63:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for( int i = 0; i < parts.size(); ++i ){
                                    ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_dens_init.cpp.o
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[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_linalg.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_linalg.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_linalg.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp: In member function 'void potdata::readpot(const char*, const char*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:394:13: warning: variable 'dp' set but not used [-Wunused-but-set-variable]
    double f,dp;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:375:18: warning: variable 'alm' set but not used [-Wunused-but-set-variable]
  double alp = al,alm = al;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:158:19: warning: variable 'dr' set but not used [-Wunused-but-set-variable]
   double x0,x1,dx,dr;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:187:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:203:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:246:34: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,sizeof(line),in);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:306:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:329:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:331:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:334:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:343:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:345:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:358:34: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,sizeof(line),in);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp: In function 'void getparmindata(const char*, int*, double*, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:109:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:119:34: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,sizeof(line),in);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:123:34: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,sizeof(line),in);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_setup_done.cpp: In member function 'double LAMMPS_NS::MEAM::phi_meam(double, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_setup_done.cpp:450:21: warning: 'rho0_2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rhobar2 = rho02 / rho_bkgd2 * G2;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_setup_done.cpp:449:21: warning: 'rho0_1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rhobar1 = rho01 / rho_bkgd1 * G1;
                     ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_splinetab.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_splinetab.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_splinetab.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/pair_meamc.cpp: In member function 'void LAMMPS_NS::PairMEAMC::read_files(char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/pair_meamc.cpp:590:69: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
     meam_inst->meam_setup_param(which,value,nindex,index,&errorflag);
                                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::compute_x(const int*, const int* const*, double*, double*, double*, double*, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:593:24: warning: unused variable 'mx' [-Wunused-variable]
   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:593:27: warning: unused variable 'itag' [-Wunused-variable]
   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:593:32: warning: unused variable 'jtag' [-Wunused-variable]
   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:598:10: warning: unused variable 'nbc' [-Wunused-variable]
   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:598:20: warning: unused variable 'tbl' [-Wunused-variable]
   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:598:30: warning: unused variable 'tbm' [-Wunused-variable]
   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:599:13: warning: unused variable 'lmax_local' [-Wunused-variable]
   const int lmax_local = lmax;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:608:10: warning: variable 't0' set but not used [-Wunused-but-set-variable]
   double t0,t1;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:608:13: warning: variable 't1' set but not used [-Wunused-but-set-variable]
   double t0,t1;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:617:18: warning: unused variable 'tsort' [-Wunused-variable]
   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:617:42: warning: unused variable 'tlookup' [-Wunused-variable]
   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:619:10: warning: unused variable 'ntsort' [-Wunused-variable]
   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:619:36: warning: unused variable 'ntlookup' [-Wunused-variable]
   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineShift::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp:227:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
        fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp:228:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
        fread(&kcost[1],sizeof(double),atom->nangletypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp:229:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
        fread(&ksint[1],sizeof(double),atom->nangletypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp:230:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
        fread(&theta[1],sizeof(double),atom->nangletypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'virtual void LAMMPS_NS::PairMGPT::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:1837:9: warning: variable 'volpres_tag' set but not used [-Wunused-but-set-variable]
     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:1837:25: warning: variable 'precision_tag' set but not used [-Wunused-but-set-variable]
     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_5_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 64u))[1]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 64u))[1]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 64u))[1]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 64u))[1]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 128u))[2]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 128u))[2]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 128u))[2]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 128u))[2]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 192u))[3]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 192u))[3]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 192u))[3]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 192u))[3]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 256u))[4]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 256u))[4]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 256u))[4]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 256u))[4]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 320u))[5]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 320u))[5]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 320u))[5]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 320u))[5]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_7_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 64u))[1]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 64u))[1]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 64u))[1]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 64u))[1]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 128u))[2]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 128u))[2]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 128u))[2]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 128u))[2]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(2,2);
   ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 192u))[3]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 192u))[3]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 192u))[3]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 192u))[3]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 256u))[4]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 256u))[4]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 256u))[4]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 256u))[4]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 320u))[5]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 320u))[5]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 320u))[5]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 320u))[5]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 384u))[6]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(6,6);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 384u))[6]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(6,6);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 384u))[6]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(6,6);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 384u))[6]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(6,6);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 448u))[7]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(7,7);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 448u))[7]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(7,7);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 448u))[7]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(7,7);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 448u))[7]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(7,7);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineShiftExp::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:259:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&umin[1],sizeof(double),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:260:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&a[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:261:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&cost[1],sizeof(double),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:262:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&sint[1],sizeof(double),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:263:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                               ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp: In member function 'virtual void LAMMPS_NS::AngleDipole::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp:208:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp:209:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gamma0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp: In member function 'virtual void LAMMPS_NS::AngleFourier::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp:234:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp:235:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C0[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp:236:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C1[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp:237:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp: In member function 'virtual void LAMMPS_NS::AngleFourierSimple::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp:240:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp:241:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp:242:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&N[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp: In member function 'virtual void LAMMPS_NS::AngleQuartic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp:235:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp:236:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp:237:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp:238:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonicShift::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp:179:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp:180:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp:181:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r1[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_ackland_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_ackland_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_ackland_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonicShiftCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:181:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:182:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:183:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r1[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_basal_atom.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_entropy_atom.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_stress_mop.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_stress_mop.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_pressure_grem.cpp: In member function 'virtual double LAMMPS_NS::ComputePressureGrem::compute_scalar()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_pressure_grem.cpp:93:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       scalar = (temperature->dof * boltz * t +
                                          ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_stress_mop_profile.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_temp_rotate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_temp_rotate.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp: In member function 'virtual void LAMMPS_NS::DihedralCosineShiftExp::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:324:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&umin[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:325:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:326:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cost[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:327:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sint[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:328:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta[1],sizeof(double),atom->ndihedraltypes,fp);
                                                            ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: At global scope:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:575:13: warning: 'void tr_count(const double*, const double*, double*, const double*, double*, const double*, double*)' defined but not used [-Wunused-function]
 static void tr_count(const double * restrict A,
             ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp: In member function 'virtual void LAMMPS_NS::DihedralFourier::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp:367:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp:382:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(k[i],sizeof(double),nterms[i],fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp:383:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(multiplicity[i],sizeof(int),nterms[i],fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp:384:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(shift[i],sizeof(double),nterms[i],fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralNHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp:321:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp:331:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(a[i],sizeof(double),nterms[i],fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp: In member function 'virtual void LAMMPS_NS::DihedralQuadratic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp:328:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp:329:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi0[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp: In member function 'virtual void LAMMPS_NS::DihedralSpherical::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:758:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:778:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(Ccoeff[i],sizeof(double),nterms[i],fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:779:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(phi_mult[i],sizeof(double),nterms[i],fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:780:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(phi_shift[i],sizeof(double),nterms[i],fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:781:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(phi_offset[i],sizeof(double),nterms[i],fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:782:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta1_mult[i],sizeof(double),nterms[i],fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:783:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta1_shift[i],sizeof(double),nterms[i],fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:784:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta1_offset[i],sizeof(double),nterms[i],fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:785:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta2_mult[i],sizeof(double),nterms[i],fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:786:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta2_shift[i],sizeof(double),nterms[i],fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:787:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta2_offset[i],sizeof(double),nterms[i],fp);
                                                          ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_addtorque.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_addtorque.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_addtorque.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp: In member function 'virtual void LAMMPS_NS::DihedralTable::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp:1045:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp:1046:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp: In member function 'virtual void LAMMPS_NS::DihedralTableCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp:1032:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp:1033:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelateLong::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp:507:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::read(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:2769:22: warning: variable 'edgeflag' set but not used [-Wunused-but-set-variable]
   int equivflag = 0, edgeflag = 0, bondflag = 0, customedgesflag = 0;
                      ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_electron_stopping.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_electron_stopping.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_electron_stopping.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ffl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ffl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ffl.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_filter_corotate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_filter_corotate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_filter_corotate.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::dedup_mega_gloves(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:1842:27: warning: 'dedup_size' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (int i = dedup_size-1; i > 0; --i) { //dedup_size
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::limit_bond(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:2003:79: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (stabilization_flag == 1) i_statted_tags[atom->map(temp_limit_glove[i])] = 0;
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:1980:15: warning: 'temp_limit_glove' may be used uninitialized in this function [-Wmaybe-uninitialized]
     delete [] temp_limit_glove;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::unlimit_bond()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:2038:57: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (stabilization_flag == 1) i_statted_tags[i] = 1;
                                                         ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_flow_gauss.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ti_spring.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ti_spring.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_ees.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_ees.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_ees.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp: In constructor 'LAMMPS_NS::FixTTMMod::FixTTMMod(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:120:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:121:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:125:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:126:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:130:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:131:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:135:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:136:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:145:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:146:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:150:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:151:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:155:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:156:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:160:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:161:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:165:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:166:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:170:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:171:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:175:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:176:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:180:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:181:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:185:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:186:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:190:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:191:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:195:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:196:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:200:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:201:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:205:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:206:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:210:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:211:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:215:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:216:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:220:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:221:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:225:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:226:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_region_ees.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_region_ees.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_region_ees.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp: In member function 'virtual void LAMMPS_NS::ImproperCossq::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp:304:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp:305:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp: In member function 'virtual void LAMMPS_NS::ImproperDistance::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp:250:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp:251:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp: In member function 'virtual void LAMMPS_NS::ImproperFourier::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:328:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:329:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:330:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C1[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:331:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C2[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:332:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&all[1],sizeof(int),atom->nimpropertypes,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp: In member function 'virtual void LAMMPS_NS::ImproperRing::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp:328:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp:329:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp: In member function 'virtual void LAMMPS_NS::PairAGNI::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:220:78: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (evflag) ev_tally_xyz_full(i,0.0,0.0,fxtmp,fytmp,fztmp,delx,dely,delz);
                                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:220:78: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:220:78: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairBuckMDF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:305:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:309:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:310:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:311:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:312:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairBuckMDF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:341:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:342:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:343:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:344:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp: In member function 'void LAMMPS_NS::PairAGNI::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:460:70: warning: 'wantdata' may be used uninitialized in this function [-Wmaybe-uninitialized]
     } else if (params && (wantdata >=0) && (nwords == params[wantdata].numeta+3)) {
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:430:26: warning: 'curparam' may be used uninitialized in this function [-Wmaybe-uninitialized]
     } else if ((curparam >=0) && (nwords == 1) && (strcmp(words[0],"endVar") == 0)) {
                          ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_drip.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_drip.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_drip.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDiel::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:285:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rme[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:286:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigmae[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:287:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDiel::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:314:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:315:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:316:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp: In member function 'virtual void LAMMPS_NS::PairCoulShield::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:301:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigmae[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:302:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp: In member function 'virtual void LAMMPS_NS::PairCoulShield::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:328:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:329:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:330:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip_multi.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip_multi.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip_multi.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp: In member function 'void LAMMPS_NS::PairE3B::presetParam(int, bool&, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp:617:17: warning: 'lconv' may be used uninitialized in this function [-Wmaybe-uninitialized]
   bondL *= lconv*BOND_DELTA;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp:611:14: warning: 'econv' may be used uninitialized in this function [-Wmaybe-uninitialized]
   e2 *= econv;
              ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_extep.cpp.o
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[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp: In member function 'virtual void LAMMPS_NS::PairGaussCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:303:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:307:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&hgauss[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:308:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rmh[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:309:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigmah[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:310:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp: In member function 'virtual void LAMMPS_NS::PairGaussCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:339:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:340:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:341:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp: In member function 'void LAMMPS_NS::PairILPGrapheneHBN::calc_FvdW(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:451:39: warning: unused variable 'k' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:451:41: warning: unused variable 'l' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:451:43: warning: unused variable 'kk' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:451:46: warning: unused variable 'll' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp: In member function 'void LAMMPS_NS::PairILPGrapheneHBN::calc_FRep(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:552:38: warning: unused variable 'r2inv' [-Wunused-variable]
   double rsq,r,Rcut,rhosq1,exp0,exp1,r2inv,r6inv,r8inv,Tap,dTap,Vilp;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:552:44: warning: unused variable 'r6inv' [-Wunused-variable]
   double rsq,r,Rcut,rhosq1,exp0,exp1,r2inv,r6inv,r8inv,Tap,dTap,Vilp;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:552:50: warning: unused variable 'r8inv' [-Wunused-variable]
   double rsq,r,Rcut,rhosq1,exp0,exp1,r2inv,r6inv,r8inv,Tap,dTap,Vilp;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:553:16: warning: unused variable 'TSvdw' [-Wunused-variable]
   double frho1,TSvdw,TSvdw2inv,Erep,fsum,rdsq1;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:553:22: warning: unused variable 'TSvdw2inv' [-Wunused-variable]
   double frho1,TSvdw,TSvdw2inv,Erep,fsum,rdsq1;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:555:22: warning: unused variable 'ILP_neighs_j' [-Wunused-variable]
   int *ILP_neighs_i,*ILP_neighs_j;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp: In member function 'void LAMMPS_NS::PairKolmogorovCrespiFull::calc_FvdW(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:453:39: warning: unused variable 'k' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:453:41: warning: unused variable 'l' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:453:43: warning: unused variable 'kk' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:453:46: warning: unused variable 'll' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp: In member function 'void LAMMPS_NS::PairKolmogorovCrespiFull::calc_FRep(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:552:45: warning: variable 'r8inv' set but not used [-Wunused-but-set-variable]
   double rsq,r,rhosq1,exp0,exp1,r2inv,r6inv,r8inv,Tap,dTap,Vkc;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:555:21: warning: unused variable 'KC_neighs_j' [-Wunused-variable]
   int *KC_neighs_i,*KC_neighs_j;
                     ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lebedeva_z.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lebedeva_z.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lebedeva_z.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp.o
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[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_list.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_list.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_list.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJ_AB_MDF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:305:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:309:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&aparm[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:310:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bparm[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:311:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:312:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJ_AB_MDF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:339:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:831:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:835:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:836:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:837:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shift[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:838:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:870:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:871:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:872:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:873:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:874:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:875:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:876:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJExpandCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:967:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:959:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:959:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:962:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:957:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJMDF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:313:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:317:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:318:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:319:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:320:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJMDF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:347:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:553:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:529:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:553:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:553:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:559:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:556:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:186:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:191:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:195:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:188:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:188:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:489:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:493:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:494:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:495:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:496:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:497:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&scale[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:526:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:527:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:528:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSpline::read_file(const char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:442:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:448:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:478:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSpline::SplineFunction::parse(FILE*, LAMMPS_NS::Error*, bool)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:642:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:645:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:651:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:658:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:662:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:280:25: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:279:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               rsq*rcutlj2inv+
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:272:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:270:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:29: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:272:45: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:270:46: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:37: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:272:29: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:277:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual double LAMMPS_NS::PairLJSFDipoleSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:625:17: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:624:10: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       rsq*rcutlj2inv+
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:622:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:617:29: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += qtmp * r3inv * qpfac * pjdotr;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:615:30: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += -q[j] * r3inv * pqfac * pidotr;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:617:21: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += qtmp * r3inv * qpfac * pjdotr;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:617:37: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += qtmp * r3inv * qpfac * pjdotr;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:615:38: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += -q[j] * r3inv * pqfac * pidotr;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp: In member function 'virtual void LAMMPS_NS::PairMomb::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:310:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:314:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:315:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:316:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:317:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:318:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rr[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:319:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp: In member function 'virtual void LAMMPS_NS::PairMomb::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:351:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:352:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sscale,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:353:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&dscale,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:354:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:355:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSWSpline::read_file(const char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:471:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSWSpline::SplineFunction::parse(FILE*, LAMMPS_NS::Error*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:603:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(line, MAXLINE, fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:609:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(line, MAXLINE, fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:615:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(line, MAXLINE, fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:619:41: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(line, MAXLINE, fp);
                                         ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_tersoff_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_tersoff_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_tersoff_table.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSmoothLinear::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:276:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:280:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:281:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:282:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:283:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSmoothLinear::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:310:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:311:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp: In member function 'virtual void LAMMPS_NS::PairSRP::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:701:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:706:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:707:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp: In member function 'virtual void LAMMPS_NS::PairSRP::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:735:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:736:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bptype,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:737:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&btype,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:738:33: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&min,sizeof(int),1,fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:739:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&midpoint,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:740:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&exclude,sizeof(int),1,fp);
                                     ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/temper_grem.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/temper_grem.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/temper_grem.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/temper_npt.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2P6::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:388:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:389:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:390:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:391:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:392:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k5[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:393:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k6[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:395:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_k[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:396:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:397:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:399:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:400:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:401:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:402:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineBuck6d::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:334:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:335:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:336:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&th0[1],sizeof(double),atom->nangletypes,fp);
                                                       ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineBuck6d::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:178:47: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
         evdwl = ebuck6d - offset[itype][jtype];
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:163:33: warning: 'r32inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     fpair = forcebuck6d * r32inv;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperInversionHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp:315:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kw[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp:316:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&w0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:417:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:421:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:422:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d2[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:423:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d3[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:424:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:425:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha_ij[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:426:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:459:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&vdwl_smooth,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:460:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:461:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:462:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:463:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:464:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/dynamical_matrix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/dynamical_matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/dynamical_matrix.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:191:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:193:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:186:51: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = ebuck6d - offset[itype][jtype];
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBuck6dCoulGaussDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:556:63: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  rsq*f_shift_ij[itype][jtype]);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:555:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:550:47: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck6d = ebuck6d - offset[itype][jtype];
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:449:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:453:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:454:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d2[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:455:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d3[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:456:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:457:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha_ij[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:458:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:492:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&vdwl_smooth,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:493:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&coul_smooth,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:494:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:495:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:496:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:497:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:498:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuck6dCoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:611:71: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:611:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:611:66: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:605:47: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck6d = ebuck6d - offset[itype][jtype];
                                               ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:210:72: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:210:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:210:77: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
                                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:204:51: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = ebuck6d - offset[itype][jtype];
                                                   ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_alloy_types.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_alloy_types.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_alloy_types.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_canonical_coloured.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_canonical_coloured.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_canonical_coloured.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp: In member function 'void LAMMPS_NS::FixPhonon::GaussJordan(int, std::complex<double>*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp:787:14: warning: 'irow' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,icol,irow,j,k,l,ll,idr,idc;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp:826:22: warning: 'icol' may be used uninitialized in this function [-Wmaybe-uninitialized]
     idr = icol*n+icol;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp: In function 'int get_neighbours(void*, size_t, size_t, int, size_t*, int32_t*, double (*)[3])':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp:189:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   if (atom_index < data->nlocal) {
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp:203:14: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (j == atom_index)
              ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_convex_hull_incremental.cpp.o
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[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_deformation_gradient.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/fix_qeq_reax.cpp: In member function 'virtual void LAMMPS_NS::FixQEqReax::pre_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/fix_qeq_reax.cpp:514:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     qeq_time = t_end - t_start;
                      ^
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_allocate.cpp.o
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[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_bonds.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/pair_reaxc.cpp: In member function 'virtual void LAMMPS_NS::PairReaxC::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/pair_reaxc.cpp:547:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     data->timing.nbrs = t_end - t_start;
                               ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_forces.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_forces.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_forces.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_control.cpp: In function 'char Read_Control_File(char*, control_params*, output_controls*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_control.cpp:121:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp: In function 'char Read_Force_Field(FILE*, reax_interaction*, control_params*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:58:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:61:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:80:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAX_LINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:92:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:97:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:98:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:99:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:152:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:178:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:197:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:216:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:236:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( s, MAX_LINE, fp );
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:321:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:331:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:335:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAX_LINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:362:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAX_LINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:483:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:488:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAX_LINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:544:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:549:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAX_LINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:602:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:607:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:673:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:683:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_init_md.cpp.o
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[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_io_tools.cpp.o
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[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_multi_body.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_multi_body.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_multi_body.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_nonbonded.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_nonbonded.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_nonbonded.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Tridiagonal_Solve(const double*, const double*, double*, double*, double*, unsigned int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:41:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for(i = 1; i < n; i++){
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Natural_Cubic_Spline(LAMMPS_NS::Error*, const double*, const double*, cubic_spline_coef*, unsigned int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:68:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 2; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:72:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:76:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n-2; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:80:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:87:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n; ++i ){
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Complete_Cubic_Spline(LAMMPS_NS::Error*, const double*, const double*, double, double, cubic_spline_coef*, unsigned int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:118:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n; ++i )
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:122:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n; ++i )
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:126:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 0; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:131:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:136:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n; ++i ){
                   ^
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_reset_tools.cpp.o
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[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_traj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_traj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_traj.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_valence_angles.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_valence_angles.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_valence_angles.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp: In function 'void* smalloc(LAMMPS_NS::Error*, rc_bigint, const char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:83:41: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
               "returning NULL.", n, name);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:83:41: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:90:79: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
     snprintf(errmsg, 256, "Failed to allocate %ld bytes for array %s", n, name);
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:90:79: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp: In function 'void* scalloc(LAMMPS_NS::Error*, rc_bigint, rc_bigint, const char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:106:42: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
             "returning NULL.\n", n, name );
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:106:42: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:113:43: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'rc_bigint {aka long long int}' [-Wformat=]
              "returning NULL", name, size );
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:113:43: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'rc_bigint {aka long long int}' [-Wformat=]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:121:84: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
     snprintf(errmsg, 256, "Failed to allocate %ld bytes for array %s", n*size, name);
                                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:121:84: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_vector.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_traj.cpp: In function 'int Write_Header(reax_system*, control_params*, output_controls*, mpi_datatypes*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_traj.cpp:107:79: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
     sprintf( out_control->line, BIGINT_LINE, "number_of_atoms:", system->bigN );
                                                                               ^
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[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp.o
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'void LAMMPS_NS::FixRigidMeso::set_xv()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:330:50: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:329:60: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:329:50: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'virtual void LAMMPS_NS::PairSMTBQ::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:434:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(ptr,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:437:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(ptr,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:488:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:492:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:500:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:509:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:527:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:541:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:564:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:567:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:620:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:632:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:654:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:667:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:674:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:694:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(ptr,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:697:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:707:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:718:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:721:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:726:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:734:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:737:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:744:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:747:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:757:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:760:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:765:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:791:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:794:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:802:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:812:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/atom_vec_meso.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/atom_vec_meso.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/atom_vec_meso.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp: In member function 'virtual void LAMMPS_NS::FixMesoMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp:708:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp:677:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp:646:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'void LAMMPS_NS::FixRigidMeso::set_v()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:450:40: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x1 = x[i][1] + ybox*yprd + zbox*yz;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:449:50: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:449:40: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                        ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_e_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_e_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_e_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp: In constructor 'LAMMPS_NS::FixMesoMove::FixMesoMove(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp:173:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"units") == 0) {
                        ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_rho_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_rho_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_rho_atom.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_t_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_t_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_t_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:693:3: warning: 'test' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (test == 0) {
   ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/fix_meso.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/fix_meso.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/fix_meso.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/fix_meso_stationary.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/fix_meso_stationary.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/fix_meso_stationary.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'void LAMMPS_NS::PairSMTBQ::tabqeq()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:1457:70: warning: 'bCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (r > rc) {dij = aCoeff *square(r- rc-nang) *exp(bCoeff*r);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:1457:37: warning: 'aCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (r > rc) {dij = aCoeff *square(r- rc-nang) *exp(bCoeff*r);
                                     ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_heatconduction.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_heatconduction.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_heatconduction.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_idealgas.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_idealgas.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_idealgas.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_lj.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_rhosum.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_rhosum.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_rhosum.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'void LAMMPS_NS::PairSMTBQ::Charge()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:2593:61: warning: 'gp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     QOxInit=max(QOxInit, -0.98* params[1].qform *nQEqcall[gp]/nQEqaall[gp])   ;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:2812:24: warning: 't_init' may be used uninitialized in this function [-Wmaybe-uninitialized]
     dt = t_end - t_init;
                        ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_taitwater.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_taitwater_morris.cpp.o
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[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY/compute_force_tally.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/fix_nh_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/fix_nh_uef.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/fix_npt_uef.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/compute_pressure_uef.cpp: In member function 'virtual void LAMMPS_NS::ComputePressureUef::compute_vector()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/compute_pressure_uef.cpp:143:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
                               ^
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[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp: In member function 'virtual void LAMMPS_NS::AngleCross::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:281:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kss[1],sizeof(double),atom->nangletypes,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:282:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kbs0[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:283:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kbs1[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:284:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r00[1],sizeof(double),atom->nangletypes,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:285:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r01[1],sizeof(double),atom->nangletypes,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:286:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp: In member function 'virtual void LAMMPS_NS::AngleMM3::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp:228:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp:229:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp: In member function 'virtual void LAMMPS_NS::BondMM3::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp:181:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp:182:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp: In member function 'virtual void LAMMPS_NS::ImproperDistHarm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp:259:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp:260:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_data.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_data.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_data.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp: In member function 'virtual void LAMMPS_NS::ImproperSQDistHarm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp:259:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp:260:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:523:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:527:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:528:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:529:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:530:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:563:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:564:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:565:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&truncw,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:566:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:567:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:568:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:569:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:570:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:523:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:527:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:528:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:529:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:530:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:563:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:564:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:565:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&truncw,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:566:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:567:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:568:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:569:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:570:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairMM3Switch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:677:17: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:693:36: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:677:35: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:668:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:668:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:671:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:666:32: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc1;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:683:7: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (r>cut_lj[itype][jtype]-truncw) {
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJSwitch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:658:19: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
     forcelj = expb*lj1[itype][jtype]*r-6.0*lj4[itype][jtype]*r6inv;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:692:36: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:675:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:666:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:666:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:669:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:664:32: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc1;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:682:7: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (r>cut_lj[itype][jtype]-truncw) {
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:193:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ecoul += prefactor2*erfc2*factor_coul;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:184:36: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc1;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:193:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ecoul += prefactor2*erfc2*factor_coul;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:189:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:211:41: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:194:24: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
           evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:201:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (r>cut_lj[itype][jtype]-truncw) {
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:186:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:186:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:197:23: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:196:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ecoul += prefactor2*erfc2*factor_coul;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:187:36: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc1;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:196:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ecoul += prefactor2*erfc2*factor_coul;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:192:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:213:41: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:197:41: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:203:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (r>cut_lj[itype][jtype]-truncw) {
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:189:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:189:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_omp.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_omp.cpp.o
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[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_sphere_omp.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_omp.cpp: In member function 'void LAMMPS_NS::BondFENEOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_omp.cpp:140:9: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_omp.cpp: In member function 'void LAMMPS_NS::BondFENEOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_omp.cpp:140:9: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'void LAMMPS_NS::BondFENEExpandOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_expand_omp.cpp:144:9: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'void LAMMPS_NS::BondFENEExpandOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_expand_omp.cpp:144:9: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_morse_omp.cpp.o
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[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_nonlinear_omp.cpp.o
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[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp: In member function 'void LAMMPS_NS::BondQuarticOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp:152:26: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (rsq < TWO_1_3) ebond += 4.0*sr6*(sr6-1.0) + 1.0;
                          ^
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp: In member function 'void LAMMPS_NS::BondQuarticOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp:152:26: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/dihedral_class2_omp.cpp.o
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[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_gravity_omp.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nvt_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nvt_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:498:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:493:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:477:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:498:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:493:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:477:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:498:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:493:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:477:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:498:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:493:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:477:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_class2_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:675:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:662:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:675:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:662:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:675:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:662:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp: In member function 'virtual void LAMMPS_NS::FixQEqReaxOMP::pre_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp:347:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     qeq_time = t_end - t_start;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:437:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:432:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:417:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:437:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:432:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:417:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:437:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:432:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:417:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:437:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:432:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:417:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       pd = -pd;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:235:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
       p = 2.0 - p;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:611:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:598:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:611:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:598:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       pd = -pd;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:235:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
       p = 2.0 - p;
       ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_harmonic_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:611:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:598:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       pd = -pd;
       ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_umbrella_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_umbrella_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_umbrella_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cossq_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cossq_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cossq_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_fourier_omp.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pppm_disp_tip4p_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pppm_disp_tip4p_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pppm_tip4p_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pppm_tip4p_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pppm_tip4p_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:112:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:48:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:110:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:47:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:110:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:47:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:118:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:116:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:49:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:116:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:49:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:120:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:49:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:118:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:48:46: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:118:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:48:41: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                         ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:112:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:110:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:49:36: note: 'iatom' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:110:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:49:31: note: 'imol' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:112:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:110:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:49:36: note: 'iatom' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:110:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:49:31: note: 'imol' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                               ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:117:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:115:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:49:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:115:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:49:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:126:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:124:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:53:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:124:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:53:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:118:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:49:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:147:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:48:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:147:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:48:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:123:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:121:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:48:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:121:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:48:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:124:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:122:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:50:46: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:122:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:50:41: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                         ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:120:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:155:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:49:46: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:155:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:49:41: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:133:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:131:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:50:46: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:131:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:50:41: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                         ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:113:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:111:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:51:36: note: 'iatom' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:111:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:51:31: note: 'imol' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                               ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:121:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:119:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:54:36: note: 'iatom' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:119:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:54:31: note: 'imol' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                               ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:131:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:129:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:50:46: note: 'iatom' was declared here
   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:129:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:50:41: note: 'imol' was declared here
   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:148:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:146:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:54:54: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:146:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:54:49: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:165:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (which == 0) neighptr_middle[n_middle++] = j;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:54:40: note: 'n_middle' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:190:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:57:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:94:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:81:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:81:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:81:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:150:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:192:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:53:54: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:192:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:53:49: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:166:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (which == 0) neighptr_middle[n_middle++] = j;
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:53:40: note: 'n_middle' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:236:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:56:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:93:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:80:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:80:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:80:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:155:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:153:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:53:54: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:153:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:53:49: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:172:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (which == 0) neighptr_middle[n_middle++] = j;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:53:40: note: 'n_middle' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:197:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:56:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:93:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:80:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:80:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:80:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:145:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:143:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:55:47: note: 'iatom' was declared here
   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:143:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:55:42: note: 'imol' was declared here
   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:160:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (which == 0) neighptr_middle[n_middle++] = j;
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:55:33: note: 'n_middle' was declared here
   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:184:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:58:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:22:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:97:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:84:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:84:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:84:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:163:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:161:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:56:57: note: 'iatom' was declared here
   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:161:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:56:52: note: 'imol' was declared here
   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:179:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (which == 0) neighptr_middle[n_middle++] = j;
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:56:43: note: 'n_middle' was declared here
   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:203:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:59:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:22:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:98:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:85:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:85:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:85:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:177:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
             ^
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:177:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
             ^
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_debye_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_debye_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_dsf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_dsf_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_wolf_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_dpd_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_dpd_tstat_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp:147:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = epsilon[itype][jtype]*
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp:145:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp:147:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = epsilon[itype][jtype]*
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp:145:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:154:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:154:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_expand_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_expand_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_expand_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:160:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:160:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:13: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:174:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:13: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:174:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:180:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:180:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp:146:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp:146:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:13: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:13: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
             ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_soft_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_ufm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_ufm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_ufm_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a * tb->e[itable] + b * tb->e[itable+1] +
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:185:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a * tb->e[itable] + b * tb->e[itable+1] +
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:185:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
             ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gayberne_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gayberne_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gayberne_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_resquared_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_resquared_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_resquared_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp:146:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp:146:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_poly_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_poly_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:170:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:171:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:170:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:171:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:211:19: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (EVFLAG) ev_tally_thr(this, i,j,nlocal,NEWTON_PAIR,
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:204:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       fztmp += delz*fpair;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:211:19: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (EVFLAG) ev_tally_thr(this, i,j,nlocal,NEWTON_PAIR,
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:204:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       fztmp += delz*fpair;
       ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_poly_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_poly_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:204:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:204:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:259:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:259:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hooke_omp.cpp.o
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[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:179:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:176:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:179:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:176:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:174:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:174:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                    ^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:186:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:191:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:195:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:186:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:191:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:195:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:181:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:190:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:181:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:190:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:454:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:466:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:466:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:454:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:454:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:454:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:443:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:443:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_adp_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_adp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_adp_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_inner(int, int, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1335:28: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1331:28: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1304:28: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1300:28: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_middle(int, int, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1597:28: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1593:28: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1566:28: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1562:28: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::TORSION_thr(int, int, int, int, double*, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:999:77: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ev_tally4_thr(this,i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl,thr);
                                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::FLJ_thr(int, int, int, int, int, double*, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:569:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair = dC*dwij / rij;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:613:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:608:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:608:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:613:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:584:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:580:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkjS / rikS;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:603:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:608:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:613:45: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:608:45: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:584:40: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:603:45: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:639:84: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
             v_tally4_thr(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS,thr);
                                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:639:84: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_morse_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_comb_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_comb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_comb_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyOMP::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:187:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:200:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSOMP::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:189:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:205:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair += D_i * rhojp * t1;
           ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eim_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eim_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eim_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_rebo_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_rebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_rebo_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_sw_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_sw_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_sw_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o
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[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_lps_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_lps_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_lps_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:420:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:391:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:420:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:391:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:420:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:391:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:420:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:391:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:404:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:400:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:375:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:371:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_pmb_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_pmb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_pmb_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (drudetype[type[i]] != NOPOL_TYPE &&
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:15: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:15: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = qi*qj * table;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:15: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:241:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:252:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:241:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (drudetype[type[i]] != NOPOL_TYPE &&
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:15: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:15: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = qi*qj * table;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:15: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:241:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:252:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:241:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j != di_closest){
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j != di_closest){
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j != di_closest){
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j != di_closest){
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:157:13: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = lj1[itype][jtype] * 4.0 * epsilon[itype][jtype] *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:154:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:157:13: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = lj1[itype][jtype] * 4.0 * epsilon[itype][jtype] *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:154:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:179:13: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = lj1[itype][jtype] * 4.0 * epsilon[itype][jtype] *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:173:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:179:13: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = lj1[itype][jtype] * 4.0 * epsilon[itype][jtype] *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:173:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:435:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:435:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:435:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:406:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:435:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:406:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp: In member function 'void LAMMPS_NS::PairAGNIOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp:159:17: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (EVFLAG) ev_tally_xyz_full_thr(this,i,0.0,0.0,
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp:159:17: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp:159:17: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:419:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:415:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:406:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_diel_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_diel_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_diel_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:406:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_edip_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_edip_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_edip_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:390:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:386:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gauss_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gauss_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gauss_cut_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_meam_spline_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_meam_spline_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_meam_spline_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
             ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_table_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_asphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_asphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_asphere_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp: In member function 'virtual void LAMMPS_NS::PairReaxCOMP::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp:223:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     data->timing.nbrs = t_end - t_start;
                               ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bond_orders_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bond_orders_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bond_orders_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_nonbonded_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_nonbonded_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_nonbonded_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:780:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:775:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:759:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bonds_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bonds_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bonds_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:780:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:775:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:759:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:780:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:775:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:759:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:780:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:775:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:759:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:957:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:944:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:957:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:944:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:957:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:944:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_forces_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_forces_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_forces_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp: In function 'int Init_ListsOMP(reax_system*, control_params*, simulation_data*, storage*, reax_list**, mpi_datatypes*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp:54:12: warning: variable 'comm' set but not used [-Wunused-but-set-variable]
   MPI_Comm comm;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_multi_body_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_multi_body_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_multi_body_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_valence_angles_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_valence_angles_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_valence_angles_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_opt.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_morse_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_morse_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_morse_opt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_ufm_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_ufm_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_ufm_opt.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 ecoul = prefactor*erfc;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = etable[itable] + fraction*detable[itable];
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 ecoul = prefactor*erfc;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = etable[itable] + fraction*detable[itable];
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = etable[itable] + fraction*detable[itable];
                                        ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_long_coul_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_long_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_long_coul_long_opt.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_opt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:437:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:437:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_alloy_opt.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_beck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_beck_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_gpu.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_beck_gpu.cpp: In member function 'void LAMMPS_NS::PairBeckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_beck_gpu.cpp:240:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_gpu.cpp: In member function 'void LAMMPS_NS::PairBornGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_gpu.cpp:242:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp:281:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp:278:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp:278:72: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp:282:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp:237:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_debye_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_debye_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp:249:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp:249:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_dsf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_dsf_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_tstat_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_tstat_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_tstat_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp: In member function 'void LAMMPS_NS::PairDPDGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp:405:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp: In member function 'void LAMMPS_NS::PairGaussGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp:230:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJ96CutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp:226:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCubicGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp:234:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp:231:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp:236:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp:248:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:252:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:252:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:255:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:282:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:283:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:269:28: warning: 'forcecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:276:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:282:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp:239:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp: In member function 'void LAMMPS_NS::PairLJGromacsGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp:235:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp:241:74: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
               if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                          ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairMIECutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp:225:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp: In member function 'void LAMMPS_NS::PairMorseGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp:221:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp: In member function 'void LAMMPS_NS::PairSoftGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp:232:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp: In member function 'void LAMMPS_NS::PairTableGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp:333:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp:333:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp:330:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp:338:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp: In member function 'void LAMMPS_NS::PairUFMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp:235:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp:224:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp: In member function 'void LAMMPS_NS::PairZBLGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp:232:59: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp:237:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp: In member function 'void LAMMPS_NS::PairGayBerneGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp:335:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp:338:63: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                       -r12[0],-r12[1],-r12[2]);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp: In member function 'void LAMMPS_NS::PairRESquaredGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp:310:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp:313:73: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                       fforce[2],-r12[0],-r12[1],-r12[2]);
                                                                         ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2GPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_gpu.cpp:223:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:272:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:273:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:276:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:276:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp:302:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       f[i][2] += delz*fpair;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp:298:36: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (eflag) evdwl *= factor_lj;
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp:235:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:325:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:326:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:330:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:329:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:284:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:281:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:281:72: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:285:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp:306:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp:311:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp:308:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp:308:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:353:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:351:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:349:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:349:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:353:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:358:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:70: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:54: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:47: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:31: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:70: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:54: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:417:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp:282:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp:283:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp:287:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp:286:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp:274:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp:275:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp:279:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp:279:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp:281:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp:286:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp:283:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp:283:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:317:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:322:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:326:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:326:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:305:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:310:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:314:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:307:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:307:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:283:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:278:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:287:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'ecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,ecoul,fpair,delx,dely,delz);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_sw_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_sw_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_sw_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSGPU::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:376:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:377:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:378:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:379:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:404:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:426:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyGPU::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp:433:55: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (me == 0) grab(fptr,file->nr,&file->rhor[i][1]);
                                                       ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:442:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_mod_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_mod_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_mod_gpu.cpp
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_zbl_gpu.cpp.o
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[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_vashishta_gpu.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:311:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:316:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:320:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:313:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:313:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:388:25: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:387:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               rsq*rcutlj2inv +
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:380:35: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv * qpfac * pjdotr;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:378:36: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv * pqfac * pidotr;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:29: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:380:43: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv * qpfac * pjdotr;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:378:44: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv * pqfac * pidotr;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:37: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:380:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv * qpfac * pjdotr;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:385:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) +
                          ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/main.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/main.cpp
[100%] Linking CXX executable lmp_openmpi
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/lmp.dir/link.txt --verbose=1
/usr/bin/c++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp  -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/openmpi/lib -Wl,--enable-new-dtags -rdynamic CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/main.cpp.o  -o lmp_openmpi -Wl,-rpath,/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi:/usr/lib/openmpi/lib: liblammps_openmpi.so.0 /usr/lib/openmpi/lib/libmpi_cxx.so /usr/lib/openmpi/lib/libmpi.so -ljpeg -lpng -lfftw3 -lpython3.6m -lvoro++ -lkim-api libcsmpi.a -lm libpoems.a libatc.a -lopenblas libcolvars.a libh5md.a -lhdf5 -lsz -lz -ldl -lm libgpu.a -lOpenCL 
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi'
[100%] Built target lmp
make[1]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi'
/usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi/CMakeFiles 0
~/build/BUILD/lammps-stable_7Aug2019
+ popd
+ test -n openmpi
+ module unload mpi/openmpi-arm
++ /usr/bin/modulecmd sh unload mpi/openmpi-arm
+ eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;'
++ MANPATH=/usr/share/man:/usr/local/share/man
++ export MANPATH
++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ unset LD_LIBRARY_PATH
++ unset LOADEDMODULES
++ unset MPI_BIN
++ unset MPI_COMPILER
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset MPI_INCLUDE
++ unset MPI_LIB
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ unset PYTHONPATH
++ unset _LMFILES_
+ for mpi in ''\'''\''' mpich openmpi openmpi3
+ test -n openmpi3
+ module load mpi/openmpi3-arm
++ /usr/bin/modulecmd sh load mpi/openmpi3-arm
+ eval LD_LIBRARY_PATH=/usr/lib/openmpi3/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi3-arm' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi3-arm:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib/openmpi3/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi3-arm' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi3' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib/openmpi3' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi3-arm' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib/openmpi3/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi3-arm' ';export' 'MPI_MAN;MPI_PYTHON2_SITEARCH=/usr/lib/python2.7/site-packages/openmpi3' ';export' 'MPI_PYTHON2_SITEARCH;MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi3' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi3' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi3-arm' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib/openmpi3/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib/openmpi3/lib/pkgconfig:/usr/lib/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi3' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi3-arm' ';export' '_LMFILES_;'
++ LD_LIBRARY_PATH=/usr/lib/openmpi3/lib
++ export LD_LIBRARY_PATH
++ LOADEDMODULES=mpi/openmpi3-arm
++ export LOADEDMODULES
++ MANPATH=/usr/share/man/openmpi3-arm:/usr/share/man:/usr/local/share/man
++ export MANPATH
++ MPI_BIN=/usr/lib/openmpi3/bin
++ export MPI_BIN
++ MPI_COMPILER=openmpi3-arm
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi3
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib/openmpi3
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/openmpi3-arm
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib/openmpi3/lib
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/openmpi3-arm
++ export MPI_MAN
++ MPI_PYTHON2_SITEARCH=/usr/lib/python2.7/site-packages/openmpi3
++ export MPI_PYTHON2_SITEARCH
++ MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi3
++ export MPI_PYTHON_SITEARCH
++ MPI_SUFFIX=_openmpi3
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi3-arm
++ export MPI_SYSCONFIG
++ PATH=/usr/lib/openmpi3/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ PKG_CONFIG_PATH=/usr/lib/openmpi3/lib/pkgconfig:/usr/lib/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi3
++ export PYTHONPATH
++ _LMFILES_=/etc/modulefiles/mpi/openmpi3-arm
++ export _LMFILES_
+ mkdir -p openmpi3
~/build/BUILD/lammps-stable_7Aug2019/openmpi3 ~/build/BUILD/lammps-stable_7Aug2019
+ pushd openmpi3
+ cp -al ../lammps-testing-d0394a77fa2b4b2d545a73ea092cf6de7616aac8 tests/
+ CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ export CFLAGS
+ CXXFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ export CXXFLAGS
+ FFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro '
+ export LDFLAGS
++ test -z openmpi3
+ /usr/bin/cmake3 -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DBUILD_SHARED_LIBS:BOOL=ON -C ../cmake/presets/all_on.cmake -C ../cmake/presets/nolib.cmake -DBUILD_LIB=ON -DPKG_PYTHON=ON -DPKG_VORONOI=ON -DPKG_USER-ATC=ON -DPKG_USER-H5MD=ON -DPKG_KIM=ON -DBUILD_TOOLS=ON -DENABLE_TESTING=ON -DPYTHON_INSTDIR=/usr/lib/python3.6/site-packages -DCMAKE_INSTALL_SYSCONFDIR=/etc -DPKG_GPU=ON -DGPU_API=OpenCL -DBUILD_OMP=ON -DFFT=FFTW3 -DPKG_USER-INTEL=OFF -DCMAKE_INSTALL_BINDIR=/usr/lib/openmpi3/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib/openmpi3/lib -DLAMMPS_MACHINE=openmpi3 -DLAMMPS_LIB_SUFFIX=openmpi3 -DCMAKE_INSTALL_MANDIR=/usr/share/man/openmpi3-arm -DBUILD_MPI=ON -DPKG_MPIIO=ON '-DCMAKE_EXE_LINKER_FLAGS=-Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/openmpi3/lib -Wl,--enable-new-dtags' '-DCMAKE_SHARED_LINKER_FLAGS=-Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/openmpi3/lib -Wl,--enable-new-dtags' -DLAMMPS_TESTING_SOURCE_DIR=/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/tests ../cmake
loading initial cache file ../cmake/presets/all_on.cmake
loading initial cache file ../cmake/presets/nolib.cmake
-- The CXX compiler identification is GNU 4.8.5
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Could NOT find Git (missing: GIT_EXECUTABLE) 
-- Running check for auto-generated files from make-based build system
-- Found MPI_CXX: /usr/lib/openmpi3/lib/libmpi_cxx.so (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Found OpenMP_CXX: -fopenmp (found version "3.1") 
-- Found OpenMP: TRUE (found version "3.1")  
-- Looking for C++ include omp.h
-- Looking for C++ include omp.h - found
-- Looking for sgemm_
-- Looking for sgemm_ - not found
-- Looking for C++ include pthread.h
-- Looking for C++ include pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - found
-- Found Threads: TRUE  
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- Found BLAS: /usr/lib/libopenblas.so  
-- Looking for cheev_
-- Looking for cheev_ - found
-- A library with LAPACK API found.
-- Found JPEG: /usr/lib/libjpeg.so (found version "62") 
-- Found PNG: /usr/lib/libpng.so (found version "1.5.13") 
-- Found ZLIB: /usr/lib/libz.so (found version "1.2.7") 
-- Found GZIP: /usr/bin/gzip  
-- Could NOT find FFMPEG (missing: FFMPEG_EXECUTABLE) 
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.27.1") 
-- Checking for module 'fftw3'
--   Found fftw3, version 3.3.3
-- Found FFTW3: /usr/lib/libfftw3.so  
-- Found PythonLibs: /usr/lib/libpython3.6m.so (found version "3.6.8") 
-- Found VORO: /usr/lib/libvoro++.so  
-- Could NOT find CURL (missing: CURL_LIBRARY CURL_INCLUDE_DIR) 
-- Checking for module 'libkim-api>=2.0'
--   Found libkim-api, version 2.1.3
-- Found KIM-API: kim-api  
-- Looking for C++ include cmath
-- Looking for C++ include cmath - found
-- The C compiler identification is GNU 4.8.5
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- HDF5: Using hdf5 compiler wrapper to determine C configuration
-- Found HDF5: /usr/lib/libhdf5.so;/usr/lib/libsz.so;/usr/lib/libz.so;/usr/lib/libdl.so;/usr/lib/libm.so (found version "1.8.12")  
-- Looking for CL_VERSION_2_2
-- Looking for CL_VERSION_2_2 - found
-- Found OpenCL: /usr/lib/libOpenCL.so (found version "2.2") 
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu/atom_cl.h...
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Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu/lj_cubic_cl.h...
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Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu/lj_gromacs_cl.h...
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Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu/re_squared_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu/re_squared_lj_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu/tersoff_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu/tersoff_zbl_cl.h...
Creating /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu/tersoff_mod_cl.h...
-- Generating style_angle.h...
-- Generating style_atom.h...
-- Generating style_body.h...
-- Generating style_bond.h...
-- Generating style_command.h...
-- Generating style_compute.h...
-- Generating style_dihedral.h...
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-- Generating style_integrate.h...
-- Generating style_kspace.h...
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-- Generating style_nstencil.h...
-- Generating style_ntopo.h...
-- Generating style_pair.h...
-- Generating style_reader.h...
-- Generating style_region.h...
-- Generating packages_angle.h...
-- Generating packages_atom.h...
-- Generating packages_body.h...
-- Generating packages_bond.h...
-- Generating packages_command.h...
-- Generating packages_compute.h...
-- Generating packages_dihedral.h...
-- Generating packages_dump.h...
-- Generating packages_fix.h...
-- Generating packages_improper.h...
-- Generating packages_integrate.h...
-- Generating packages_kspace.h...
-- Generating packages_minimize.h...
-- Generating packages_nbin.h...
-- Generating packages_npair.h...
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-- Generating lmpinstalledpkgs.h...
-- Skipping building 'chain.x' with Ninja build tool due to lack of Fortran support
-- The Fortran compiler identification is GNU 4.8.5
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran  -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Found PythonInterp: /usr/bin/python3.6 (found version "3.6.8") 
-- Running test discovery...
-- Found 53 tests.
-- Building package: ASPHERE
-- Building package: BODY
-- Building package: CLASS2
-- Building package: COLLOID
-- Building package: CORESHELL
-- Building package: DIPOLE
-- Building package: GRANULAR
-- Building package: KSPACE
-- Building package: MANYBODY
-- Building package: MC
-- Building package: MESSAGE
-- Building package: MISC
-- Building package: MOLECULE
-- Building package: PERI
-- Building package: POEMS
-- Building package: QEQ
-- Building package: REPLICA
-- Building package: RIGID
-- Building package: SHOCK
-- Building package: SPIN
-- Building package: SNAP
-- Building package: SRD
-- Building package: KIM
-- Building package: PYTHON
-- Building package: MPIIO
-- Building package: VORONOI
-- Building package: USER-ATC
-- Building package: USER-BOCS
-- Building package: USER-CGDNA
-- Building package: USER-MESO
-- Building package: USER-CGSDK
-- Building package: USER-COLVARS
-- Building package: USER-DIFFRACTION
-- Building package: USER-DPD
-- Building package: USER-DRUDE
-- Building package: USER-EFF
-- Building package: USER-FEP
-- Building package: USER-H5MD
-- Building package: USER-MANIFOLD
-- Building package: USER-MEAMC
-- Building package: USER-MGPT
-- Building package: USER-MISC
-- Building package: USER-MOFFF
-- Building package: USER-PHONON
-- Building package: USER-PTM
-- Building package: USER-QTB
-- Building package: USER-REAXC
-- Building package: USER-SDPD
-- Building package: USER-SMTBQ
-- Building package: USER-SPH
-- Building package: USER-TALLY
-- Building package: USER-UEF
-- Building package: USER-YAFF
-- Building package: USER-OMP
-- Building package: OPT
-- Building package: GPU
-- The following packages have been found:
 * MPI
 * OpenMP
 * LAPACK
 * Threads
 * BLAS
 * JPEG
 * PNG
 * ZLIB
 * FFTW3
 * PythonLibs
 * VORO
 * PkgConfig
 * KIM-API
 * HDF5
 * OpenCL
 * PythonInterp
-- <<< Build configuration >>>
   Build type       
   Install path     /usr
   Compilers and Flags:
   C++ Compiler     /usr/bin/c++
       Type         GNU
       Version      4.8.5
   C++ Flags        -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp 
   Defines          LAMMPS_SMALLBIG;LAMMPS_MEMALIGN=64;LAMMPS_JPEG;LAMMPS_PNG;LAMMPS_GZIP;FFT_FFTW3;LMP_PYTHON;LMP_MPIIO;LMP_USER_OMP
-- Fortran Compiler /usr/bin/gfortran
           Type     GNU
           Version  4.8.5
   Fortran Flags    -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules 
-- C Compiler /usr/bin/cc
     Type     GNU
     Version  4.8.5
     C Flags    
-- Linker flags:
   Executable      -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/openmpi3/lib -Wl,--enable-new-dtags
-- Shared libraries  -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/openmpi3/lib -Wl,--enable-new-dtags
-- Link libraries: /usr/lib/openmpi3/lib/libmpi_cxx.so;/usr/lib/openmpi3/lib/libmpi.so;/usr/lib/libjpeg.so;/usr/lib/libpng.so;/usr/lib/libz.so;/usr/lib/libfftw3.so;/usr/lib/libpython3.6m.so;/usr/lib/libvoro++.so;-lkim-api;cslib;m;poems;atc;colvars;h5md;gpu
-- Using mpi with headers in /usr/include/openmpi3-arm and /usr/lib/openmpi3/lib/libmpi_cxx.so;/usr/lib/openmpi3/lib/libmpi.so
-- GPU Api: OPENCL
-- OCL Tune: GENERIC
-- GPU Precision: MIXED
-- Using FFTW3 as primary FFT library
-- Using double precision FFTs
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:
    CMAKE_CXX_FLAGS_RELEASE
    CMAKE_C_FLAGS_RELEASE
    CMAKE_Fortran_FLAGS_RELEASE
    INCLUDE_INSTALL_DIR
    LIB_INSTALL_DIR
    SHARE_INSTALL_PREFIX
    SYSCONF_INSTALL_DIR
-- Build files have been written to: /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3
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/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:318.14:
      iseed = sseed                                                     
              1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:97.15:
          x2 = xboundlo + random(iseed)*xprd                            
               1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:98.15:
          y2 = yboundlo + random(iseed)*yprd                            
               1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:99.15:
          z2 = zboundlo + random(iseed)*zprd                            
               1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:132.21:
 10         xinner = 2.0*random(iseed) - 1.0                            
                     1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:133.21:
            yinner = 2.0*random(iseed) - 1.0                            
                     1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:134.21:
            zinner = 2.0*random(iseed) - 1.0                            
                     1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:147.17:
            x2 = x1 + xsurf*bondlength(iset)                            
                 1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:148.17:
            y2 = y1 + ysurf*bondlength(iset)                            
                 1
Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1)
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/chain.f:149.17:
            z2 = z1 + zsurf*bondlength(iset)                            
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/usr/bin/cc -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -fPIE   -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/WriteDataFile.c.o   -c /builddir/build/BUILD/lammps-stable_7Aug2019/tools/msi2lmp/src/WriteDataFile.c
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/cslib.cpp: In member function 'void CSLIB_NS::CSlib::onefield(int, int, int&, int&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/cslib.cpp:649:26: warning: 'bigbytes' may be used uninitialized in this function [-Wmaybe-uninitialized]
   nbytes = (int) bigbytes;
                          ^
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[  1%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp: In member function 'virtual void CSLIB_NS::MsgFile::recv(int&, int*&, int&, char*&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp:125:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(lengths,sizeof(int),2,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp:132:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(header,sizeof(int),nheader,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_file.cpp:135:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(buf,1,nbuf,fp);
                                    ^
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[  2%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_two.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_two.cpp: In member function 'void CSLIB_NS::MsgMPITwo::init(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src/msg_mpi_two.cpp:60:39: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(port,MPI_MAX_PORT_NAME,fp);
                                       ^
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[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:182:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (_ef_atom)
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:196:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
       if (_vf_atom)
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:231:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (_ef_atom)
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:250:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
       if (_vf_atom)
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp: In instantiation of 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:313:16:   required from here
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_answer.cpp:224:7: warning: unused variable 'ii' [-Wunused-variable]
   int ii, vstart=0, iend=_inum;
       ^
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/usr/bin/make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3 && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3 /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3 /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/CMakeFiles/poems.dir/DependInfo.cmake --color=
Scanning dependencies of target poems
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3'
/usr/bin/make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3'
[  2%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/body.cpp.o
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[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.cpp.o
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[  2%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/fastmatrixops.cpp.o
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In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.cpp:17:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  3%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_alb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_alb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarbias_alb.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Coupling.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/fixedpoint.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/fixedpoint.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/fixedpoint.cpp
[  3%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/freebodyjoint.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/freebodyjoint.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/freebodyjoint.cpp
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/inertialframe.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/mat4x4.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/mat4x4.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.cpp:17:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/mat6x6.cpp.o
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[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/onfunctions.cpp.o
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In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dpd.cpp:17:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
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[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/particle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/particle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/particle.cpp
[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemsobject.cpp.o
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[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.cpp.o
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In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.h: In constructor 'TreeNode::TreeNode(const int&, TreeNode*, TreeNode*, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.h:36:6: warning: 'TreeNode::data' will be initialized after [-Wreorder]
  int data;
      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.h:32:12: warning:   'TreeNode* TreeNode::left' [-Wreorder]
  TreeNode *left;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/poemstreenode.cpp:22:1: warning:   when initialized here [-Wreorder]
 TreeNode::TreeNode (const int & item, TreeNode *lptr,TreeNode *rptr,
 ^
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In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems/sphericaljoint.cpp.o
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In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentum.cpp
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_beck_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentum.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentum.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3 && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3 /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3 /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color=
Scanning dependencies of target ocl_get_devices
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3'
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3'
[  6%] Building CXX object CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DUCL_OPENCL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp:25:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Linking CXX executable ocl_get_devices
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/ocl_get_devices.dir/link.txt --verbose=1
/usr/bin/c++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp  -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/openmpi3/lib -Wl,--enable-new-dtags -rdynamic CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ucl_get_devices.cpp.o  -o ocl_get_devices -lOpenCL 
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[  6%] Built target ocl_get_devices
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.cpp
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cd /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3 && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3 /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3 /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/CMakeFiles/binary2txt.dir/DependInfo.cmake --color=
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make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3'
[  6%] Building CXX object CMakeFiles/binary2txt.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/binary2txt.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp: In function 'int main(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:97:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&ntimestep,sizeof(bigint),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:107:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&natoms,sizeof(bigint),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:108:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&triclinic,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:109:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&boundary[0][0],6*sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:110:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&xlo,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:111:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&xhi,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:112:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&ylo,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:113:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&yhi,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:114:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&zlo,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:115:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&zhi,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:117:32: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(&xy,sizeof(double),1,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:118:32: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(&xz,sizeof(double),1,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:119:32: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(&yz,sizeof(double),1,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:121:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&size_one,sizeof(int),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:122:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&nchunk,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:159:28: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(&n,sizeof(int),1,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp:171:32: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
  fread(buf,sizeof(double),n,fp);
                                ^
[  6%] Linking CXX executable binary2txt
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/binary2txt.dir/link.txt --verbose=1
/usr/bin/c++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp  -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/openmpi3/lib -Wl,--enable-new-dtags -rdynamic CMakeFiles/binary2txt.dir/builddir/build/BUILD/lammps-stable_7Aug2019/tools/binary2txt.cpp.o  -o binary2txt 
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3'
[  6%] Built target binary2txt
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs_ext.cpp
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_angles.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_angles.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_angles.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_coordnums.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_coordnums.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_coordnums.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_ext.cpp
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_distances.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_distances.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_distances.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_born_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.cpp
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferPartitionOfUnity.cpp.o
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[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
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[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_gpath.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_gpath.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_gpath.cpp
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_protein.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_protein.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_protein.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferKernel.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_ext.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.cpp
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_rotations.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_rotations.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarcomp_rotations.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_buck_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferPartitionOfUnity.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomToMoleculeTransfer.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomToMoleculeTransfer.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomToMoleculeTransfer.cpp
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvardeps.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvardeps.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvardeps.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_charmm_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.cpp
[  8%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvargrid.cpp.o
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[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.cpp.o
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[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/BodyForce.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/BodyForce.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/BodyForce.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarmodule.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarmodule.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarmodule.cpp
[  8%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarparse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarparse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarparse.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CBLattice.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CBLattice.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CBLattice.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CauchyBorn.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CauchyBorn.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CauchyBorn.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CbPotential.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CbPotential.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/CbPotential.cpp
[  8%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarproxy.cpp.o
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[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.cpp
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ChargeRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ChargeRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ChargeRegulator.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.cpp:16:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarscript.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarscript.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarscript.cpp
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ConcentrationRegulator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ConcentrationRegulator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ConcentrationRegulator.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_ext.cpp
[ 10%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvartypes.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvartypes.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvartypes.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ChargeRegulator.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ChargeRegulator.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.cpp
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronChargeDensity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronChargeDensity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronChargeDensity.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarvalue.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarvalue.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/colvarvalue.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronDragPower.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronDragPower.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronDragPower.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElasticTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronFlux.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronFlux.cpp
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatCapacity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatCapacity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatCapacity.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp: In member function 'void Lepton::CompiledExpression::compileExpression(const Lepton::ExpressionTreeNode&, std::vector<std::pair<Lepton::ExpressionTreeNode, int> >&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:91:49: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i = 0; i < node.getChildren().size(); i++) {
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:113:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             for (int i = 1; i < args.size(); i++)
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp: In member function 'double Lepton::CompiledExpression::evaluate() const':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:170:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i = 0; i < variablesToCopy.size(); i++)
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:175:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int step = 0; step < operation.size(); step++) {
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/CompiledExpression.cpp:180:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             for (int i = 0; i < args.size(); i++)
                                           ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_dpd_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionProgram.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionProgram.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_alloy_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_alloy_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_alloy_ext.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp: In instantiation of 'void LAMMPS_AL::EAM<numtyp, acctyp>::loop(bool, bool) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp:533:16:   required from here
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.cpp:448:14: warning: variable 'vflag' set but not used [-Wunused-but-set-variable]
   int eflag, vflag;
              ^
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatFlux.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatFlux.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronHeatFlux.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_alloy_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronPhononExchange.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronPhononExchange.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ElectronPhononExchange.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const std::vector<Lepton::ExpressionTreeNode>&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:40:55: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (operation->getNumArguments() != children.size())
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&, const Lepton::ExpressionTreeNode&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:47:55: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (operation->getNumArguments() != children.size())
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:53:55: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (operation->getNumArguments() != children.size())
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ExpressionTreeNode.cpp:58:55: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (operation->getNumArguments() != children.size())
                                                       ^
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Operation.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Operation.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Operation.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_ext.cpp
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_fs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_fs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_fs_ext.cpp
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ParsedExpression.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ParsedExpression.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/ParsedExpression.cpp
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_eam_fs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -DLEPTON -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ParsedExpression Lepton::Parser::parse(const string&, const std::map<std::basic_string<char>, Lepton::CustomFunction*>&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:181:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             if (pos != tokens.size())
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:190:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         if (pos != tokens.size())
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ExpressionTreeNode Lepton::Parser::parsePrecedence(const std::vector<Lepton::ParseToken>&, int&, const std::map<std::basic_string<char>, Lepton::CustomFunction*>&, const std::map<std::basic_string<char>, Lepton::ExpressionTreeNode>&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:201:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (pos == tokens.size())
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:227:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars/lepton/src/Parser.cpp:241:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
                                ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gauss_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.cpp:27:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_gayberne_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
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[ 11%] Built target colvars
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj96_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long_ext.cpp
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_class2_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye_ext.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Element.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Element.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Element.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm_ext.cpp
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_cubic_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf_ext.cpp
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Interpolate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Interpolate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Interpolate.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_expand_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Mesh.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Mesh.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Mesh.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_gromacs_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.h:9,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FE_Engine.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long_ext.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldEulerIntegrator.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Function.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Function.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Function.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FundamentalAtomicQuantity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FundamentalAtomicQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FundamentalAtomicQuantity.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_mie_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/GhostManager.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/GhostManager.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/GhostManager.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/FieldManager.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_morse_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/InterscaleOperators.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/InterscaleOperators.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/InterscaleOperators.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor.cpp:18:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_kernel.h:27:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_neighbor_shared.cpp:17:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ImplicitSolveOperator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.cpp:25:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_pppm_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.cpp:27:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_re_squared_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Array.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Array2D.h:9,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KD_Tree.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KernelFunction.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KernelFunction.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KernelFunction.cpp
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KinetoThermostat.cpp.o
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[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.cpp.o
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[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_soft_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_sw_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KinetoThermostat.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/KinetoThermostat.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MPI_Wrappers.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MPI_Wrappers.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MPI_Wrappers.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Kinetostat.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MPI_Wrappers.cpp:2:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Material.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Material.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Material.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table_ext.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_table_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MeshReader.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MeshReader.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MeshReader.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MoleculeSet.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MoleculeSet.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MoleculeSet.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PaqAtcUtility.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PaqAtcUtility.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PaqAtcUtility.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/NonLinearSolver.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp: In member function 'void ATC::OutputManager::read_restart_file(std::string, ATC::RESTART_LIST*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/OutputManager.cpp:164:42: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&myVal,sizeof(double),1,fp);
                                          ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_mod_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParDiagonalMatrix.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ParSparseMatrix.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h: At global scope:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerPairQuantity.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.cpp:26:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_ufm_ext.cpp:22:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.h:8,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PhysicsModel.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PoissonSolver.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_vashishta_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PolynomialSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PolynomialSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PolynomialSolver.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PrescribedDataManager.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PrescribedDataManager.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PrescribedDataManager.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Quadrature.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Quadrature.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Quadrature.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SchrodingerSolver.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SchrodingerSolver.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SchrodingerSolver.cpp
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SpeciesTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SpeciesTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SpeciesTimeIntegrator.cpp
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_ext.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Stress.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Stress.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Stress.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_yukawa_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ThermalTimeIntegrator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ThermalTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ThermalTimeIntegrator.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.cpp:24:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SchrodingerSolver.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SchrodingerSolver.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl_ext.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DGENERIC_OCL -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/gpu -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl_ext.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/lal_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/gpu/geryon/ocl_device.h:376:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 18%] Linking CXX static library libgpu.a
/usr/bin/cmake3 -P CMakeFiles/gpu.dir/cmake_clean_target.cmake
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeIntegrator.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ThermalTimeIntegrator.h:5,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ThermalTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixDef.h:23:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/DenseVector.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Vector.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
   static std::string to_cap(const std::string &s) {
                      ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ViscousStress.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ViscousStress.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ViscousStress.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationChargeDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationChargeDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationChargeDiffusion.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Thermostat.h:4,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/Thermostat.cpp:1:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationDiffusion.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronContinuity.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronContinuity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronContinuity.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronMomentum.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronMomentum.cpp
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronTemperature.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronTemperature.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationElectronTemperature.cpp
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationMassDiffusion.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationMassDiffusion.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationMassDiffusion.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix.h:297:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.h:11,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/TransferLibrary.cpp:2:
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h: In member function 'void ATC_matrix::SparseMatrix<T>::compress() [with T = double]':
/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/SparseMatrix-inl.h:341:5: warning: 'next.ATC_matrix::TRI_COORD<double>::v' may be used uninitialized in this function [-Wmaybe-uninitialized]
     val[i] = next.v;
     ^
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationMomentum.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationMomentum.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationMomentum.cpp
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc/WeakEquationPhononTemperature.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/angle.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_hybrid.cpp: In member function 'virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_hybrid.cpp:337:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_hybrid.cpp:346:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_hybrid.cpp:349:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_zero.cpp: In member function 'virtual void LAMMPS_NS::AngleZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/angle_zero.cpp:131:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_map.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_body.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_body.cpp
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_charge.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_charge.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/atom_vec_charge.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom.cpp: In member function 'void LAMMPS_NS::Atom::data_atoms(int, char*, LAMMPS_NS::tagint, LAMMPS_NS::tagint, int, int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom.cpp:975:48: warning: 'iptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       imagedata = ((imageint) (atoi(values[iptr]) + IMGMAX) & IMGMASK) |
                                                ^
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[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_zero.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/change_box.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/change_box.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/change_box.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_hybrid.cpp:338:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_hybrid.cpp:347:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_hybrid.cpp:350:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/citeme.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/citeme.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/citeme.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_zero.cpp: In member function 'virtual void LAMMPS_NS::BondZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/bond_zero.cpp:129:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm.cpp.o
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[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_brick.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_brick.cpp: In member function 'virtual void LAMMPS_NS::CommBrick::borders()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_brick.cpp:702:28: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int nsend,nrecv,sendflag,nfirst,nlast,ngroup;
                            ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_adf.cpp.o
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[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_tiled.cpp: In member function 'void LAMMPS_NS::CommTiled::box_drop_brick(int, double*, double*, int&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_tiled.cpp:1496:17: warning: 'dir' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += dir;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_adf.cpp: In member function 'virtual void LAMMPS_NS::ComputeADF::init()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_adf.cpp:309:7: warning: 'x0' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int x0;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_tiled.cpp: In member function 'virtual void LAMMPS_NS::CommTiled::borders()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/comm_tiled.cpp:814:9: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
         for (i = atom->nlocal; i < nlast; i++) {
         ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angmom_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angmom_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angmom_chunk.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp: In member function 'int LAMMPS_NS::ComputeAngleLocal::compute_angles(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp:301:25: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ptr[n] = 180.0*theta/MY_PI;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp:309:17: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ivar++;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp:247:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_angle_local.cpp:245:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->angle_atom2[atom2][i]) continue;
                                       ^
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_centro_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_centro_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_centro_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_spread_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_spread_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_spread_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp: In member function 'int LAMMPS_NS::ComputeBondLocal::compute_bonds(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:400:28: warning: 'engrot' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engrot;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:397:28: warning: 'engvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engvib;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:403:30: warning: 'engtrans' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engtrans;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:391:28: warning: 'engpot' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engpot;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:406:34: warning: 'omegasq' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = sqrt(omegasq);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:409:26: warning: 'vvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = vvib;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:413:19: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ivar++;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:281:47: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         btype = onemols[imol]->bond_type[iatom][i];
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_bond_local.cpp:281:29: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         btype = onemols[imol]->bond_type[iatom][i];
                             ^
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cluster_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cluster_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cluster_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cna_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_cna_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin1d()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1514:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap < boxlo[idim]) xremap += prd[idim];
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1515:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap >= boxhi[idim]) xremap -= prd[idim];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1514:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap < boxlo[idim]) xremap += prd[idim];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin2d()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1616:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap < boxlo[jdim]) yremap += prd[jdim];
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1617:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap >= boxhi[jdim]) yremap -= prd[jdim];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1616:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap < boxlo[jdim]) yremap += prd[jdim];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin3d()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1749:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap < boxlo[kdim]) zremap += prd[kdim];
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1750:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap >= boxhi[kdim]) zremap -= prd[kdim];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:1749:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap < boxlo[kdim]) zremap += prd[kdim];
                              ^
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_com_chunk.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp: In constructor 'LAMMPS_NS::ComputeChunkAtom::ComputeChunkAtom(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_chunk_atom.cpp:415:29: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
         delta[idim] *= scale;
                             ^
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_contact_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_contact_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_contact_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_coord_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_coord_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_coord_atom.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_deprecated.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_displace_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_displace_atom.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_erotate_sphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_erotate_sphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_erotate_sphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_dihedral_local.cpp: In member function 'int LAMMPS_NS::ComputeDihedralLocal::compute_dihedrals(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_dihedral_local.cpp:319:17: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ivar++;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_dihedral_local.cpp:243:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_dihedral_local.cpp:242:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->dihedral_atom2[atom2][i]) continue;
                                       ^
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_erotate_sphere_atom.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_gyration_chunk.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_global_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeGlobalAtom::compute_peratom()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_global_atom.cpp:517:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j >= 0 && j < vmax) array_atom[i][m] = source[j];
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_global_atom.cpp:448:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j >= 0 && j < vmax) array_atom[i][m] = source[j];
                             ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_inertia_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_inertia_chunk.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_ke_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_improper_local.cpp: In member function 'int LAMMPS_NS::ComputeImproperLocal::compute_impropers(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_improper_local.cpp:162:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_improper_local.cpp:161:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->improper_atom2[atom2][i]) continue;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_improper_local.cpp:217:17: warning: 'cbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
           cbuf[n] = 180.0*acos(c)/MY_PI;
                 ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_chunk.cpp
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_local.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_local.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_property_local.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_pressure.cpp: In member function 'virtual double LAMMPS_NS::ComputePressure::compute_scalar()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_pressure.cpp:257:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       scalar = (temperature->dof * boltz * t +
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_pressure.cpp: In member function 'virtual void LAMMPS_NS::ComputePressure::compute_vector()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_pressure.cpp:304:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
                               ^
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/compute_rdf.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/create_bonds.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_box.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_box.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/create_box.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_atoms.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::add_random()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp:663:55: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp:663:31: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp:224:46: warning: 'molseed' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ranmol = new RanMars(lmp,molseed+comm->me);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_atoms.cpp:116:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"basis") == 0) {
                        ^
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/delete_bonds.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_bonds.cpp: In member function 'void LAMMPS_NS::CreateBonds::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/create_bonds.cpp:129:10: warning: 'style' may be used uninitialized in this function [-Wmaybe-uninitialized]
   } else if (style == SANGLE) {
          ^
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/deprecated.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_zero.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/displace_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/displace_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/displace_atoms.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp:322:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp:331:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dihedral_hybrid.cpp:334:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp.o
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[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::box_too_small_check()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp:851:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp:851:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::image_check()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp:752:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/domain.cpp:752:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump.cpp: In member function 'virtual void LAMMPS_NS::Dump::write()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump.cpp:514:20: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->v = vhold;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump.cpp:513:20: warning: 'xhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->x = xhold;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump.cpp:515:28: warning: 'imagehold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->image = imagehold;
                            ^
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_dcd.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_movie.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_movie.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_movie.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp: In member function 'virtual int LAMMPS_NS::DumpCustom::count()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp:1031:30: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 (*ptr != 0.0 && value != 0.0))
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp:528:13: warning: 'values' may be used uninitialized in this function [-Wmaybe-uninitialized]
     double *values;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_custom.cpp:527:18: warning: 'ptrhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     double *ptr,*ptrhold;
                  ^
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_xyz.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_xyz.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_xyz.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/error.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/error.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/error.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp: In member function 'void LAMMPS_NS::DumpImage::create_image()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:1033:66: warning: 'color2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:1027:66: warning: 'color1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             image->draw_cylinder(x[atom1],xmid,color1,diameter,3);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:968:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:968:41: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:831:55: warning: 'color' may be used uninitialized in this function [-Wmaybe-uninitialized]
       image->draw_cylinder(pt1,pt2,color,ldiamvalue,3);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/dump_image.cpp:1036:72: warning: 'diameter' may be used uninitialized in this function [-Wmaybe-uninitialized]
         } else image->draw_cylinder(x[atom1],x[atom2],color,diameter,3);
                                                                        ^
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_adapt.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_addforce.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp: In member function 'void LAMMPS_NS::Finish::end(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp:773:33: warning: 'nneighfull' may be used uninitialized in this function [-Wmaybe-uninitialized]
     tmp = MAX(nneigh,nneighfull);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/finish.cpp:773:33: warning: 'nneigh' may be used uninitialized in this function [-Wmaybe-uninitialized]
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[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_chunk.cpp: In member function 'virtual void LAMMPS_NS::FixAveChunk::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_chunk.cpp:1058:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp:538:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo.cpp:854:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_correlate.cpp:483:34: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
     values[lastindex][i] = scalar;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp: In member function 'virtual void LAMMPS_NS::FixAveHistoWeight::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_histo_weight.cpp:496:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_aveforce.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_aveforce.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_aveforce.cpp
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_balance.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_balance.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_box_relax.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_box_relax.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_box_relax.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:701:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_vector(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:912:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In member function 'int LAMMPS_NS::FixAveTime::column_length(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:972:9: warning: 'lengthone' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (lengthone != nrows)
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:630:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else vector[i] += scalar;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_balance.cpp: In member function 'void LAMMPS_NS::FixBalance::rebalance()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_balance.cpp:297:67: warning: 'sendproc' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (lbstyle == BISECTION) irregular->migrate_atoms(0,1,sendproc);
                                                                   ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_controller.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_controller.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_controller.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp: In constructor 'LAMMPS_NS::FixAveTime::FixAveTime(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_ave_time.cpp:412:9: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (value == -1)
         ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deprecated.cpp.o
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[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_dt_reset.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_dt_reset.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_dt_reset.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_enforce2d.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_enforce2d.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_enforce2d.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp: In constructor 'LAMMPS_NS::FixDeform::FixDeform(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_deform.cpp:183:18: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
         set[index].style = VARIABLE;
                  ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_move.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_move.cpp
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_neigh_history.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_neigh_history.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_neigh_history.cpp
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_nh.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_nh.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_nh.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_move.cpp: In member function 'virtual void LAMMPS_NS::FixMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_move.cpp:845:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_move.cpp:815:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_move.cpp:785:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
                                                             ^
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_nh_sphere.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_restrain.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_restrain.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_setforce.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_setforce.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_setforce.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_recenter.cpp: In member function 'virtual void LAMMPS_NS::FixRecenter::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_recenter.cpp:182:41: warning: 'bboxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_recenter.cpp:182:53: warning: 'bboxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]);
                                                     ^
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[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_spring_chunk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_spring_chunk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_spring_chunk.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_spring_rg.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_restrain.cpp: In member function 'void LAMMPS_NS::FixRestrain::restrain_dihedral(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_restrain.cpp:565:33: warning: 'ddf1' may be used uninitialized in this function [-Wmaybe-uninitialized]
   df1 = df1*cos_target[m] - ddf1*sin_target[m];
                                 ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_viscous.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_viscous.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_vector.cpp: In constructor 'LAMMPS_NS::FixVector::FixVector(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_vector.cpp:149:26: warning: 'finalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
     extarray = finalvalue;
                          ^
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[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj1043.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj1043.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj1043.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj126.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj126.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_lj126.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall.cpp: In constructor 'LAMMPS_NS::FixWall::FixWall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall.cpp:75:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_reflect.cpp: In constructor 'LAMMPS_NS::FixWallReflect::FixWallReflect(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/fix_wall_reflect.cpp:67:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/hashlittle.cpp.o
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[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp:738:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&ngroup,sizeof(int),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp:750:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/group.cpp:754:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(names[i],sizeof(char),n,fp);
                                                     ^
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance_group.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance_group.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance_group.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp: In member function 'void LAMMPS_NS::Image::draw_cube(double*, double*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/image.cpp:515:31: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
           tdir[2] = camDir[2] * t;
                               ^
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/imbalance_neigh.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_zero.cpp
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/info.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/info.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/info.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_hybrid.cpp:319:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_hybrid.cpp:328:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/improper_hybrid.cpp:331:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/input.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/integrate.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/lmppython.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp: In function 'void MathExtra::no_squish_rotate(int, double*, double*, double*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:260:52: warning: 'kq[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:260:39: warning: 'kq[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:260:26: warning: 'kq[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:260:13: warning: 'kq[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:271:28: warning: 'kp[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[3] = c_phi*p[3] + s_phi*kp[3];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:270:28: warning: 'kp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[2] = c_phi*p[2] + s_phi*kp[2];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:269:28: warning: 'kp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[1] = c_phi*p[1] + s_phi*kp[1];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_extra.cpp:268:28: warning: 'kp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[0] = c_phi*p[0] + s_phi*kp[0];
                            ^
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/math_special.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/memory.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/minimize.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/minimize.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/molecule.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1367:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1384:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1387:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(id_restart_global[i],sizeof(char),n,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1390:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1393:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(style_restart_global[i],sizeof(char),n,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1396:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1399:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(state_restart_global[i],sizeof(char),n,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1409:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nfix_restart_peratom,sizeof(int),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1426:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1429:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(id_restart_peratom[i],sizeof(char),n,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1432:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1435:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(style_restart_peratom[i],sizeof(char),n,fp);
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/modify.cpp:1438:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/nbin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/nbin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/nbin.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/nbin_standard.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/nbin_standard.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/nbin_standard.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/neigh_list.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/neigh_list.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/neigh_list.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/neigh_request.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/neigh_request.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/neigh_request.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_stencil(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp:1673:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (newtflag) {
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_pair(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/neighbor.cpp:1781:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (newtflag) {
     ^
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_copy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_copy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_copy.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBin::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp:103:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp:101:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin.cpp:101:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_atomonly.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_atomonly.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_atomonly.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBinGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp:109:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp:107:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_bin_ghost.cpp:107:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp: In member function 'virtual void LAMMPS_NS::NPairFullMulti::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp:110:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp:108:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_multi.cpp:108:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsq::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp:104:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp:102:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp:102:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq.cpp:88:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsqGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp:103:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp:101:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_full_nsq_ghost.cpp:101:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_atomonly_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_atomonly_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_atomonly_newton.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp:107:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp:105:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff.cpp:105:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp:115:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp:113:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newtoff_ghost.cpp:113:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp:139:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp:137:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton.cpp:137:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp:113:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp:111:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_bin_newton_tri.cpp:111:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newtoff.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp:147:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp:145:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton.cpp:145:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp:122:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp:120:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_multi_newton_tri.cpp:120:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff_ghost.cpp:126:39: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (includegroup && !(mask[j] & bitmask)) continue;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp:105:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp:103:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp:103:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newtoff.cpp:89:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp:122:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp:120:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp:120:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_nsq_newton.cpp:90:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:173:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:131:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:129:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:129:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:151:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
               neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:20:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newtoff.cpp:71:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:219:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:177:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:175:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:175:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:152:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:20:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:70:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:219:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:220:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       numneigh_middle[i] = n_middle;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton.cpp:218:29: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ilist_middle[inum] = i;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:181:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:139:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:137:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:137:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:159:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
               neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                         ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:20:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_bin_newton_tri.cpp:71:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:168:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:129:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:127:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:127:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:147:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:75:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newtoff.cpp:113:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newtoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newtoff.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:188:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:148:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:146:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:146:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:167:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:77:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_respa_nsq_newton.cpp:116:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_bin_newton_tri.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newtoff.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newton.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newtoff.cpp:77:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_half_size_nsq_newton.cpp:80:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_halffull_newton.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip.cpp.o
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[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_size_off2on.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_size_off2on.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_size_off2on.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipRespa::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp:149:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp:150:36: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       numneigh_middle[i] = n_middle;
                                    ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:223:67: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (posix_memalign(&ptr, LAMMPS_MEMALIGN, pagesize*sizeof(T)))
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_respa.cpp:61:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/npair_skip_size_off2on_oneside.cpp.o
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[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/nstencil_half_multi_3d_newton.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp: In member function 'void LAMMPS_NS::LAMMPS::init_pkg_lists()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp:901:13: note: variable tracking size limit exceeded with -fvar-tracking-assignments, retrying without
 void _noopt LAMMPS::init_pkg_lists()
             ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ntopo_dihedral_template.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ntopo_dihedral_template.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ntopo_improper_all.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ntopo_improper_all.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ntopo_improper_all.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp: In constructor 'LAMMPS_NS::LAMMPS::LAMMPS(int, char**, MPI_Comm)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp:639:5: warning: 'wlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
     for (iarg = wfirst; iarg < wlast; iarg++)
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/lammps.cpp:165:7: warning: 'wfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int wfirst,wlast;
       ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ntopo_improper_partial.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:280:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:284:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&AA[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:285:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&BB[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:286:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&aa[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:287:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:288:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&beta[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:289:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:319:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_beck.cpp:320:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:332:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:336:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:337:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:338:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:339:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:340:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:341:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:372:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:373:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:374:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born.cpp:375:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp: In member function 'void LAMMPS_NS::Pair::write_file(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:1675:5: warning: 'rsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (rsq < cutsq[itype][jtype]) {
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:1686:32: warning: 'q_hold' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (atom->q) atom->q = q_hold;
                                ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp: In member function 'virtual void LAMMPS_NS::Pair::init_tables(double, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:412:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (msmflag) ftable[i] = qqrd2e/r * fgamma;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:399:30: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
         etable[i] = qqrd2e/r * egamma;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:403:30: warning: 'derfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
         etable[i] = qqrd2e/r * derfc;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:413:61: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair.cpp:413:56: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
           else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
                                                        ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:363:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:367:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:368:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:369:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:371:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:372:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:404:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:405:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:406:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:407:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:408:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:362:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:366:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:367:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:368:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:369:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:371:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:403:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alf,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:404:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:405:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:406:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:407:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:165:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:161:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:162:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:166:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:161:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:484:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:485:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:479:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:480:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:479:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:168:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:165:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_wolf.cpp:169:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:486:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:487:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:481:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:482:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_born_coul_dsf.cpp:481:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:310:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:314:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:315:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:316:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:317:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:346:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:347:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:348:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck.cpp:349:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:366:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:371:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:372:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:373:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:374:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:405:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:406:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:407:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:408:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:409:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:467:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:467:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:146:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_buck_coul_cut.cpp:146:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_streitz.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_streitz.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_streitz.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:247:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:250:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&cut[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:274:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:275:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_cut.cpp:276:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDebye::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp:148:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp:149:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp:150:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_debye.cpp:151:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:255:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:279:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:280:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:281:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_dsf.cpp:282:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_deprecated.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:251:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:275:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alf,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:276:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:277:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:278:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:315:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:316:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_coul_wolf.cpp:315:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                         ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:316:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:320:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:321:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:322:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:350:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&temperature,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:351:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:352:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd.cpp:353:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:234:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:238:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:239:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:267:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_start,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:268:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_stop,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:269:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:270:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_dpd_tstat.cpp:271:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:282:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:286:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:287:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:288:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:315:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:316:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_gauss.cpp:317:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:676:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:699:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(compute_tally,sizeof(int),nstyles,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:704:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:707:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:713:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:717:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(special_lj[m],sizeof(double),4,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:720:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:724:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(special_coul[m],sizeof(double),4,fp);
                                                              ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp: In member function 'virtual void LAMMPS_NS::PairHybridOverlay::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid_overlay.cpp:44:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int multflag;
       ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_hybrid.cpp:399:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int multflag;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:608:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:612:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:613:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:614:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:643:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:644:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:645:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:646:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:279:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:283:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:284:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:285:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:286:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:313:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp: In member function 'virtual double LAMMPS_NS::PairLJCubic::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:345:32: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:342:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:130:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                        ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cubic.cpp:127:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:390:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_lj*forcelj*r2inv;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj96_cut.cpp:394:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:602:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:606:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:607:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:608:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:637:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:638:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:639:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:640:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:355:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:359:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:360:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:361:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:362:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:392:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:393:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:394:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:395:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:396:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:384:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_lj*forcelj*r2inv;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut.cpp:388:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:451:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_cut.cpp:138:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:173:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:174:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:175:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:176:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:177:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:378:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:382:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:383:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:384:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:414:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:415:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:416:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:417:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:418:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:419:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDebye::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:215:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:211:71: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:211:53: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:109:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:109:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_debye.cpp:112:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:166:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:167:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:160:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:166:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:463:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:463:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:463:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_dsf.cpp:457:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:370:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:374:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:375:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:376:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:407:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alf,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:409:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:410:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:411:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:412:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulWolf::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:166:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_cut_coul_wolf.cpp:159:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:326:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:330:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:331:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:332:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shift[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:333:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:362:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:363:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:364:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_expand.cpp:365:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:341:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:345:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:346:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:347:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:348:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:378:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:379:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:380:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:381:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:435:65: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs.cpp:137:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:380:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:384:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:385:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:414:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:415:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:416:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_inner,sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:417:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:418:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:419:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacsCoulGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:501:51: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:497:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:490:38: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tc*tc*tc * (coulsw3 + coulsw4*tc);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:157:58: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoulswitch = tc*tc*tc * (coulsw3 + coulsw4*tc);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:167:59: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:163:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_gromacs_coul_gromacs.cpp:163:46: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                              ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:354:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:358:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:359:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:360:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:361:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:391:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:392:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:393:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:394:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp: In member function 'virtual double LAMMPS_NS::PairLJSmooth::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:452:30: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:451:60: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 -
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:447:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]) -
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:142:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:141:68: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 -
                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth.cpp:137:27: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
                           ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:285:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:289:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:290:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:291:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:318:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_lj_smooth_linear.cpp:319:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:629:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:633:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:634:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:635:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamR[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:636:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamA[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:637:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:668:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:669:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:670:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:671:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:267:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:271:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:272:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:273:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:274:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:302:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:303:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_morse.cpp:304:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:392:46: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_mie*forcemie*r2inv;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_mie_cut.cpp:396:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:247:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:251:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&prefactor[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:252:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:277:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_soft.cpp:278:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:979:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:980:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:981:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewaldflag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:982:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&pppmflag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:983:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&msmflag,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:984:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&dispersionflag,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:985:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tip4pflag,sizeof(int),1,fp);
                                       ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp: In member function 'virtual double LAMMPS_NS::PairTable::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:1044:41: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:1044:14: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:1041:35: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phi = tb->e[itable] + fraction*tb->de[itable];
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:178:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:178:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_table.cpp:175:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:281:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:285:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:286:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:287:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp: In member function 'virtual void LAMMPS_NS::PairUFM::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:315:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:316:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_ufm.cpp:317:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:255:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:259:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:260:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:287:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:288:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:289:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_yukawa.cpp:290:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/random_mars.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/random_mars.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/random_mars.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp: In member function 'virtual void LAMMPS_NS::PairZBL::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp:131:53: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp: In member function 'virtual double LAMMPS_NS::PairZBL::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zbl.cpp:279:45: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                             ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/random_park.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/random_park.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/random_park.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp:173:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp:177:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp:202:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pair_zero.cpp:203:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&coeffflag,sizeof(int),1,fp);
                                       ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_data.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_data.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/read_data.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp: In member function 'void LAMMPS_NS::ProcMap::output(char*, int*, int***)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp:693:16: warning: 'kme' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[5] = kme + 1;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp:692:16: warning: 'jme' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[4] = jme + 1;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp:691:16: warning: 'ime' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[3] = ime + 1;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp: In member function 'int LAMMPS_NS::ProcMap::best_factors(int, int**, int*, int, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/procmap.cpp:887:10: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return index;
          ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp:576:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
                                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp:504:29: warning: 'valuehalf_select' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else lo[dim] = valuehalf;
                             ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute_old(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/rcb.cpp:1068:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
                                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::seek(LAMMPS_NS::bigint, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp:283:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized]
   bigint ntimestep;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::next(LAMMPS_NS::bigint, LAMMPS_NS::bigint, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp:423:5: warning: 'eofflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (eofflag) ntimestep = -1;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_dump.cpp:378:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized]
   bigint ntimestep;
          ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/reader.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/reader.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/reader.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:305:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&flag,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:309:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&procsperfile,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:312:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:316:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&n,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:322:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(buf,sizeof(double),n,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:382:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&flag,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:385:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&procsperfile,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:394:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:398:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&n,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:404:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(buf,sizeof(double),n,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_layout()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:1104:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(all_written_send_sizes,sizeof(int),nprocs_file,fp);
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'char* LAMMPS_NS::ReadRestart::read_string()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:1286:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(value,sizeof(char),n,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_int_vec(int, int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:1298:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(vec,sizeof(int),n,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_double_vec(int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/read_restart.cpp:1309:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(vec,sizeof(double),n,fp);
                                              ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/reader_native.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/reader_native.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/reader_native.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/reader_xyz.cpp.o
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[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cone.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cone.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cone.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region.cpp: In member function 'int LAMMPS_NS::Region::surface(double, double, double, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region.cpp:190:34: warning: 'xorig[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].delz = xorig[2] - zs;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region.cpp:189:34: warning: 'xorig[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].dely = xorig[1] - ys;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region.cpp:188:34: warning: 'xorig[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].delx = xorig[0] - xs;
                                  ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_deprecated.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_deprecated.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_deprecated.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp: In member function 'virtual int LAMMPS_NS::RegBlock::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp:334:28: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
   add_contact(0,x,xp,yp,zp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp:334:28: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_block.cpp:334:28: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp: In member function 'virtual int LAMMPS_NS::RegCylinder::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp:716:30: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     add_contact(0,x,xp,yp,zp);
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp:716:30: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_cylinder.cpp:716:30: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_intersect.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_intersect.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_intersect.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_plane.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_plane.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_plane.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_prism.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/region_prism.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/region_prism.cpp
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/set.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/set.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/special.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/special.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/special.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/run.cpp: In member function 'void LAMMPS_NS::Run::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/run.cpp:172:41: warning: 'stop' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (stopflag) update->endstep = stop;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/run.cpp:170:45: warning: 'start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (startflag) update->beginstep = start;
                                             ^
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[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/timer.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/set.cpp: In member function 'void LAMMPS_NS::Set::setrandom(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/set.cpp:1150:24: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized]
           quat[1] = 0.0;
                        ^
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[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/utils.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/universe.cpp: In member function 'void LAMMPS_NS::Universe::reorder(char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/universe.cpp:148:38: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
   MPI_Comm_split(uorig,0,key,&uworld);
                                      ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/verlet.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/verlet.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/verlet.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::next(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:685:33: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
       fscanf(fp,"%d",&nextindex);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp: In member function 'void LAMMPS_NS::Velocity::set(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:544:63: warning: 'zvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(zvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:539:63: warning: 'yvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(yvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:534:63: warning: 'xvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(xvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:457:17: warning: 'vz' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vz *= zscale;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:453:17: warning: 'vy' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vy *= yscale;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:449:17: warning: 'vx' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vx *= xscale;
                 ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_coeff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_coeff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/write_coeff.cpp
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:30:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/memory.h: In member function 'void LAMMPS_NS::Velocity::create(double, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/memory.h:171:5: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     sfree(array[0]);
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/velocity.cpp:165:12: note: 'vhold' was declared here
   double **vhold;
            ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_data.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_data.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/write_data.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_dump.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_dump.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/write_dump.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_restart.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/write_restart.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/write_restart.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::group_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:3994:39: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
   } else argstack[nargstack++] = value;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate_boolean(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:4764:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int op,opprevious,flag1,flag2;
       ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:4068:20: warning: 'nstride' may be used uninitialized in this function [-Wmaybe-uninitialized]
     int index,nvec,nstride;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:4211:7: warning: 'nvec' may be used uninitialized in this function [-Wmaybe-uninitialized]
       for (int i = 0; i < nvec; i++) {
       ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_temp_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_temp_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_temp_asphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate(char*, LAMMPS_NS::Variable::Tree**, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:1186:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int op,opprevious;
       ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nh_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nh_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nh_asphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp: In member function 'virtual double LAMMPS_NS::ComputeERotateAsphere::compute_scalar()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp:138:35: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertia[0] = tbonus[tri[i]].inertia[0];
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp:129:32: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         length = lbonus[line[i]].length;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/compute_erotate_asphere.cpp:108:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nph_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nph_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nph_asphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'void LAMMPS_NS::Variable::compute_atom(int, int, double*, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:964:11: warning: 'vstore' may be used uninitialized in this function [-Wmaybe-uninitialized]
   double *vstore;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::math_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:3746:37: warning: 'value2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       double value = value1 + value2*(1.0-cos(omega*delta*update->dt));
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/variable.cpp:3412:42: warning: 'value1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       argstack[nargstack++] = sqrt(value1);
                                          ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_npt_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_npt_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_npt_asphere.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nve_asphere.cpp.o
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[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nvt_asphere.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nvt_asphere.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nvt_asphere.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nve_asphere_noforce.cpp: In member function 'virtual void LAMMPS_NS::FixNVEAsphereNoforce::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/fix_nve_asphere_noforce.cpp:88:33: warning: 'bonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = bonus[ellipsoid[i]].shape;
                                 ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_line_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_line_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_line_lj.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:463:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:466:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:470:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:474:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:475:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:476:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:508:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gamma,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:509:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&upsilon,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:510:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:511:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:512:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:513:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:441:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:444:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:448:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:452:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:453:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:454:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:482:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:483:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp: In member function 'double LAMMPS_NS::PairGayBerne::gayberne_analytic(int, int, double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double*, double, double*, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:726:36: warning: 'deta2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:725:36: warning: 'deta2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:724:36: warning: 'deta2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:726:21: warning: 'dchi2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:725:21: warning: 'dchi2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:724:21: warning: 'dchi2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:726:51: warning: '*((void*)& dUr2 +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:725:51: warning: '*((void*)& dUr2 +8)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:724:51: warning: 'dUr2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_line_lj.cpp: In member function 'virtual void LAMMPS_NS::PairLineLJ::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_line_lj.cpp:304:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_gayberne.cpp:216:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_nparticle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_nparticle.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp: In member function 'virtual void LAMMPS_NS::PairTriLJ::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_tri_lj.cpp:378:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polygon.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polygon.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE/pair_resquared.cpp:191:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_body_local.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_body_local.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_body_local.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_temp_body.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_temp_body.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/compute_temp_body.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::BodyRoundedPolyhedron::data_body(int, int, int, int*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/body_rounded_polyhedron.cpp:216:7: warning: 'nedges' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int nedges,nentries;
       ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_nh_body.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_nh_body.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_nh_body.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_nph_body.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polygon.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolygon::post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polygon.cpp:337:60: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
                           contact_list, num_contacts, facc);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polygon.cpp:299:9: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (delr > eradi) dz = cylradius;
         ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:244:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable]
       int interact, num_contacts, done;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:14: warning: variable 'rsqinv' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:33: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:39: warning: variable 'eradj' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:45: warning: variable 'rradi' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:108:51: warning: variable 'rradj' set but not used [-Wunused-but-set-variable]
   double rsq,rsqinv,r,radi,radj,eradi,eradj,rradi,rradj,k_nij,k_naij;
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolygon::sphere_against_sphere(int, int, double, double, double, double, double, double, double**, double**, double**, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:601:10: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
   double eradi,eradj,rradi,rradj;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:601:16: warning: variable 'eradj' set but not used [-Wunused-but-set-variable]
   double eradi,eradj,rradi,rradj;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:603:32: warning: variable 'fn' set but not used [-Wunused-but-set-variable]
   double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:603:38: warning: variable 'ft' set but not used [-Wunused-but-set-variable]
   double rij,rsqinv,R,fx,fy,fz,fn[3],ft[3],fpair,shift,energy;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'int LAMMPS_NS::PairBodyRoundedPolygon::vertex_against_edge(int, int, double, double, double**, double**, double**, LAMMPS_NS::tagint*, LAMMPS_NS::PairBodyRoundedPolygon::Contact*, int&, double&, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:706:24: warning: variable 'nei' set but not used [-Wunused-but-set-variable]
   int ni, npi, ifirst, nei, iefirst;
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:706:29: warning: variable 'iefirst' set but not used [-Wunused-but-set-variable]
   int ni, npi, ifirst, nei, iefirst;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:707:11: warning: variable 'npj' set but not used [-Wunused-but-set-variable]
   int nj, npj, jfirst, nej, jefirst;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:708:32: warning: variable 'eradi' set but not used [-Wunused-but-set-variable]
   double xpi[3], xpj[3], dist, eradi, eradj, rradi, rradj;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_nparticle.cpp: In member function 'virtual void LAMMPS_NS::PairBodyNparticle::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_nparticle.cpp:325:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::FixWallBodyPolyhedron::post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/fix_wall_body_polyhedron.cpp:357:58: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         contact_list, num_contacts, facc);
                                                          ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:274:11: warning: variable 'interact' set but not used [-Wunused-but-set-variable]
       int interact, num_contacts;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'void LAMMPS_NS::PairBodyRoundedPolyhedron::sanity_check()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:2344:22: warning: variable 'x3' set but not used [-Wunused-but-set-variable]
   double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:2344:28: warning: variable 'x4' set but not used [-Wunused-but-set-variable]
   double x1[3],x2[3],x3[3],x4[3],h_a[3],h_b[3],d_a,d_b;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:106:15: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int nei,nej,iefirst,jefirst;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:106:7: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int nei,nej,iefirst,jefirst;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:105:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polygon.cpp:105:13: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst;
             ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:375:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:376:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:377:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:378:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:380:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_k[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:381:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:382:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:384:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:385:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:386:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/angle_class2.cpp:387:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp: In member function 'virtual void LAMMPS_NS::BondClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp:185:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp:186:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp:187:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/bond_class2.cpp:188:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp: In member function 'virtual void LAMMPS_NS::DihedralClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:838:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:839:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:840:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:841:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:842:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:843:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:845:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:846:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:847:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:848:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_r0[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:850:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:851:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:852:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:853:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_r0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:855:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:856:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:857:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:858:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_r0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:860:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:861:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:862:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:863:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:865:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:866:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:867:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:868:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:870:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:871:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:872:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:874:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:875:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_r10[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/dihedral_class2.cpp:876:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_r30[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'virtual void LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:218:21: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (r > eradi + eradj + cut_inner) continue;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:121:43: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:121:35: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:121:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY/pair_body_rounded_polyhedron.cpp:121:13: warning: 'npi' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp: In member function 'virtual void LAMMPS_NS::ImproperClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:607:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:608:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi0[1],sizeof(double),atom->nimpropertypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:610:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k1[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:611:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k2[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:612:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k3[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:613:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_1[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:614:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_2[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:615:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_3[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:613:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:617:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:618:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:619:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:648:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:649:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:650:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:651:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp: In member function 'void LAMMPS_NS::ImproperClass2::angleangle(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/improper_class2.cpp:823:58: warning: 'eimproper' may be used uninitialized in this function [-Wmaybe-uninitialized]
                delxBD-delxBC,delyBD-delyBC,delzBD-delzBC);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:393:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_lj*forcelj*r2inv;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2.cpp:397:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:369:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:370:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:371:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:372:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:402:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:403:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:404:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:405:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:406:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/fix_wall_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/fix_wall_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/fix_wall_colloid.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:463:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:463:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:143:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_cut.cpp:143:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:808:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:812:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:813:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:814:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:845:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:846:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:847:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:848:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:849:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:850:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:851:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:940:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:940:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:933:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:933:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:936:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:931:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:605:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:609:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:610:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:645:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:646:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:647:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagfld,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:648:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:649:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:650:42: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_target, sizeof(double),1,fp);
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:651:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed, sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:652:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:653:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:654:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:655:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:539:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:513:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:539:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:539:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:545:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:542:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:179:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:184:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:187:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:187:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:181:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2/pair_lj_class2_coul_long.cpp:181:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:304:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_pu);
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian.cpp:236:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_sh);
                                          ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp: In member function 'virtual void LAMMPS_NS::PairBrownianPoly::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp:290:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_pu);
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_brownian_poly.cpp:239:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_sh);
                                          ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:397:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (comm->me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:401:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a12[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:402:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:403:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d1[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:404:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:405:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:435:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:436:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:437:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU_poly.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU_poly.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU_poly.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual double LAMMPS_NS::PairColloid::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:540:20: warning: 'phi' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return factor_lj*phi;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_colloid.cpp:191:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       f[i][2] += delz*fpair;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:685:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:689:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:690:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:723:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:724:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:725:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagfld,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:726:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:727:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:728:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:729:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:730:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate.cpp:731:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1911:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1915:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1916:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1948:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1949:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1950:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1951:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1952:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1953:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1954:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricateU.cpp:1955:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID/pair_lubricate_poly.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSFCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:141:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:137:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:138:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:142:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_dsf_cs.cpp:137:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:178:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:170:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:175:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:179:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:172:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_long_cs.cpp:172:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolfCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:141:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:138:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_born_coul_wolf_cs.cpp:142:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_wolf_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_wolf_cs.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:176:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:168:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:173:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:176:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:170:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_buck_coul_long_cs.cpp:170:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp:157:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp:162:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp:159:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_coul_long_cs.cpp:159:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/atom_vec_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/atom_vec_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/atom_vec_dipole.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:526:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:502:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:526:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:526:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:532:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:529:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:169:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:174:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:178:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:171:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:171:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:440:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:444:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:445:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:446:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:447:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:476:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:477:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:478:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:479:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:493:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:497:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:498:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:499:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:527:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:528:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:529:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:530:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:239:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:237:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:235:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:235:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:239:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:244:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:70: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:54: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:47: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:31: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:70: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:54: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_cut_dipole_long.cpp:300:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:347:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:351:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_read[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:352:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_read[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:353:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:382:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:383:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:384:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:385:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE/pair_lj_long_dipole_long.cpp:386:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_freeze.cpp.o
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[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp.o
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[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hertz_history.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hertz_history.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hertz_history.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp: In member function 'virtual void LAMMPS_NS::FixPour::pre_exchange()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp:679:42: warning: 'natom' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ninserted_mols = ninserted_atoms / natom;
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp:695:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
       atom->nbonds += onemols[imol]->nbonds * ninserted_mols;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp:653:65: warning: 'denstmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
           atom->rmass[n] = 4.0*MY_PI/3.0 * radtmp*radtmp*radtmp * denstmp;
                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_pour.cpp:502:30: warning: 'radtmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
         coords[0][3] = radtmp;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp: In member function 'void LAMMPS_NS::FixWallGran::granular(double, double, double, double, double*, double, double*, double*, double*, double*, double, double, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1363:49: warning: 'relrot3' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1363:36: warning: 'relrot2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1363:23: warning: 'relrot1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz; //Omega_T (eq 29 of Marshall)
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1172:55: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
   damp_normal_prefactor = normal_coeffs[1]*damp_normal;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/fix_wall_gran.cpp:1203:23: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
     F_pulloff = 4*M_PI*coh*Reff;
                       ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:543:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:569:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kn,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:570:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kt,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:571:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gamman,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:572:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gammat,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:573:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&xmu,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_gran_hooke_history.cpp:574:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&dampflag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1253:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1257:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&normal_model[i][j],sizeof(int),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1258:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&damping_model[i][j],sizeof(int),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1259:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&tangential_model[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1260:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&roll_model[i][j],sizeof(int),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1261:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&twist_model[i][j],sizeof(int),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1262:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(normal_coeffs[i][j],sizeof(double),4,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1263:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(tangential_coeffs[i][j],sizeof(double),3,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1264:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(roll_coeffs[i][j],sizeof(double),3,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1265:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(twist_coeffs[i][j],sizeof(double),3,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1266:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cutoff_type[i][j],sizeof(double),1,fp);
                                                        ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual double LAMMPS_NS::PairGranular::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1644:27: warning: 'magtortwist' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[8] = magtortwist;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1642:19: warning: 'fr3' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[6] = fr3;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1641:19: warning: 'fr2' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[5] = fr2;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1640:19: warning: 'fr1' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[4] = fr1;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1643:18: warning: 'fr' may be used uninitialized in this function [-Wmaybe-uninitialized]
   svector[7] = fr;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1615:49: warning: 'relrot3' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1615:36: warning: 'relrot2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1615:23: warning: 'relrot1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtwist = relrot1*nx + relrot2*ny + relrot3*nz;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1626:55: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
     magtortwist = -k_twist*history[twist_history_index] - damp_twist*magtwist;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1461:69: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
   damp_normal_prefactor = normal_coeffs[itype][jtype][1]*damp_normal;
                                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1436:40: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
     sqrt3 = MAX(0, 4*dR - t5 + SIXROOT6*coh*MY_PI*R2/(E*t6));
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1436:50: warning: 'R2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     sqrt3 = MAX(0, 4*dR - t5 + SIXROOT6*coh*MY_PI*R2/(E*t6));
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:382:49: warning: 'allhistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
           history = &allhistory[size_history*jj];
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:452:71: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
             shrmag = sqrt(history[0]*history[0] + history[1]*history[1] +
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:168:8: warning: 'touch' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *touch,**firsttouch;
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:389:30: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
           F_pulloff = 4*MY_PI*coh*Reff;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:353:75: warning: 'damp_normal' may be used uninitialized in this function [-Wmaybe-uninitialized]
         damp_normal_prefactor = normal_coeffs[itype][jtype][1]*damp_normal;
                                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:226:34: warning: 'firsthistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
       allhistory = firsthistory[i];
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:225:27: warning: 'firsttouch' may be used uninitialized in this function [-Wmaybe-uninitialized]
       touch = firsttouch[i];
                           ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp: In member function 'virtual void LAMMPS_NS::EwaldDipole::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp:506:16: warning: unused variable 'vk' [-Wunused-variable]
     double uk, vk;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp:413:18: warning: unused variable 'partial2' [-Wunused-variable]
   double partial,partial2,partial_peratom;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp: In member function 'void LAMMPS_NS::EwaldDipole::slabcorr()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp:780:12: warning: unused variable 'x' [-Wunused-variable]
   double **x = atom->x;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole.cpp:781:10: warning: unused variable 'zprd' [-Wunused-variable]
   double zprd = domain->zprd;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp: In member function 'virtual void LAMMPS_NS::EwaldDipoleSpin::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:485:16: warning: unused variable 'vk' [-Wunused-variable]
     double uk, vk;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp: In member function 'void LAMMPS_NS::EwaldDipoleSpin::slabcorr()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:766:12: warning: unused variable 'x' [-Wunused-variable]
   double **x = atom->x;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:767:10: warning: unused variable 'zprd' [-Wunused-variable]
   double zprd = domain->zprd;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:772:10: warning: unused variable 'spx' [-Wunused-variable]
   double spx,spy,spz;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:772:14: warning: unused variable 'spy' [-Wunused-variable]
   double spx,spy,spz;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual void LAMMPS_NS::PairGranular::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:920:79: warning: 'normal_coeffs_one[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         normal_coeffs[i][j][0] = normal_coeffs[j][i][0] = normal_coeffs_one[0];
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:912:61: warning: 'normal_coeffs_one[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       normal_coeffs[i][j][1] = normal_coeffs[j][i][1] = damp;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:918:60: warning: 'normal_coeffs_one[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                     poiss[i][j],poiss[i][j]);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:923:79: warning: 'normal_coeffs_one[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         normal_coeffs[i][j][3] = normal_coeffs[j][i][3] = normal_coeffs_one[3];
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp: In member function 'virtual double LAMMPS_NS::PairGranular::init_one(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR/pair_granular.cpp:1213:10: warning: 'cutoff' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return cutoff;
          ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_disp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_disp.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d_wrap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d_wrap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d_wrap.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp: In member function 'virtual void LAMMPS_NS::EwaldDipoleSpin::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/ewald_dipole_spin.cpp:430:27: warning: 'partial2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       tk[i][0] += partial2*eg[k][0];
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp: In function 'void fft_3d(double (*)[2], double (*)[2], int, fft_plan_3d*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp:69:9: warning: variable 'total' set but not used [-Wunused-but-set-variable]
   int i,total,length,offset,num;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp:69:15: warning: variable 'length' set but not used [-Wunused-but-set-variable]
   int i,total,length,offset,num;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fft3d.cpp:69:22: warning: unused variable 'offset' [-Wunused-variable]
   int i,total,length,offset,num;
                      ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/fix_tune_kspace.cpp.o
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[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:424:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:428:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:429:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:430:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:431:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:432:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:433:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:467:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:468:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:469:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:470:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:471:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:472:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:473:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:565:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:566:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:558:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:558:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:561:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:556:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:188:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:180:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:185:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:189:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:182:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_long.cpp:182:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:182:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:179:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:178:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:183:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:241:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:242:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:237:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_born_coul_msm.cpp:236:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:402:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:406:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:407:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:409:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:441:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:442:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:443:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:444:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:445:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:446:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:447:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp: In member function 'virtual void LAMMPS_NS::MSM::direct(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1640:47: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v5sum += v5_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1639:47: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v4sum += v4_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1638:47: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v3sum += v3_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1637:47: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v2sum += v2_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1636:47: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v1sum += v1_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1635:47: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v0sum += v0_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:537:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:537:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:530:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:530:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:533:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:528:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:182:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:174:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:179:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:182:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:176:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_long.cpp:176:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp: In member function 'void LAMMPS_NS::MSM::direct_top(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1995:50: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v5sum += v5_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1994:50: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v4sum += v4_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1993:50: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v3sum += v3_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1992:50: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v2sum += v2_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1991:50: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v1sum += v1_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/msm.cpp:1990:50: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v0sum += v0_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:358:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:362:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_a_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:363:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_rho_read[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:364:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_c_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_buck_read[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:397:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_buck_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:398:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:399:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:400:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:401:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:402:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_long_coul_long.cpp:403:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:178:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:175:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:174:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:178:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:236:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:236:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:232:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_buck_coul_msm.cpp:231:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:292:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:295:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&scale[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:321:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:322:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:323:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:324:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:325:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:372:29: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:374:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:374:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:372:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:143:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:138:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:140:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:140:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:156:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:161:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:158:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_long.cpp:158:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:198:31: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:200:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:200:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_coul_msm.cpp:198:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:825:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:829:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:830:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:831:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:832:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:864:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:865:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:866:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:867:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:868:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:869:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:870:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:892:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:896:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:897:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:898:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:899:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:931:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:932:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:933:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:934:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:935:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:936:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:937:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:377:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:405:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * fgamma;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:377:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:411:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:408:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:969:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:961:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:961:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:964:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:959:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1045:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       philj6 = -lj4[itype][jtype]*r6inv +
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1040:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1028:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1028:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1031:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1026:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:514:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:506:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:506:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:509:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:504:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*egamma;
                                 ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:208:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:203:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:205:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:205:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:544:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:516:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:544:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:544:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:550:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:547:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:604:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:567:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:604:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:193:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:198:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:604:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:202:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:195:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:610:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:195:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmm_coul_long.cpp:202:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:607:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:214:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:219:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:235:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl6 = -lj4[itype][jtype]*r6inv +
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:216:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:216:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:233:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl12 = r6inv*lj3[itype][jtype]*r6inv -
                                               ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:796:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:800:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:801:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:802:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:833:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:834:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:835:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:836:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:837:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:838:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:839:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:930:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:922:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:922:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:925:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:920:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:354:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:378:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * fgamma;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:354:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:384:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:381:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:464:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:456:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:456:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:459:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:454:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*egamma;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:533:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:509:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:533:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:533:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:539:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:536:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:531:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:532:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:533:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:534:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:535:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:537:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:538:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:539:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:540:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:541:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:542:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:543:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:198:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:193:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:202:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:195:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_msm.cpp:195:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:180:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:185:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:189:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:182:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_coul_long.cpp:182:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:358:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:362:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_read[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:363:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_read[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:364:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:395:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:396:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:397:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:398:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:399:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:400:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_coul_long.cpp:401:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:409:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:414:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:411:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:404:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:403:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:331:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:327:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_cut_tip4p_long.cpp:411:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1542:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1543:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1544:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1545:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1546:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1548:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1549:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1550:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1551:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1552:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1553:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:470:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:471:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:472:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:473:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:474:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:377:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:382:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:379:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:372:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:371:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:299:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:295:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_tip4p_long.cpp:379:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_middle()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:974:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:970:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:943:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:939:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_cg.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_cg.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_cg.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:445:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:450:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:447:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:440:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:439:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:367:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:363:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:447:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_inner()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:713:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:709:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:682:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:678:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1415:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1414:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1316:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pair_lj_long_tip4p_long.cpp:1312:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h: In constructor 'LAMMPS_NS::PPPMDipole::PPPMDipole(LAMMPS_NS::LAMMPS*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:63:55: warning: 'LAMMPS_NS::PPPMDipole::uz_brick_dipole' will be initialized after [-Wreorder]
   FFT_SCALAR ***ux_brick_dipole,***uy_brick_dipole,***uz_brick_dipole;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:61:17: warning:   'FFT_SCALAR*** LAMMPS_NS::PPPMDipole::vdxx_brick_dipole' [-Wreorder]
   FFT_SCALAR ***vdxx_brick_dipole,***vdyy_brick_dipole,***vdzz_brick_dipole;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:60:1: warning:   when initialized here [-Wreorder]
 PPPMDipole::PPPMDipole(LAMMPS *lmp) : PPPM(lmp),
 ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:62:17: warning: 'LAMMPS_NS::PPPMDipole::vdxy_brick_dipole' will be initialized after [-Wreorder]
   FFT_SCALAR ***vdxy_brick_dipole,***vdxz_brick_dipole,***vdyz_brick_dipole;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:61:38: warning:   'FFT_SCALAR*** LAMMPS_NS::PPPMDipole::vdyy_brick_dipole' [-Wreorder]
   FFT_SCALAR ***vdxx_brick_dipole,***vdyy_brick_dipole,***vdzz_brick_dipole;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:60:1: warning:   when initialized here [-Wreorder]
 PPPMDipole::PPPMDipole(LAMMPS *lmp) : PPPM(lmp),
 ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:18:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:62:59: warning: 'LAMMPS_NS::PPPMDipole::vdyz_brick_dipole' will be initialized after [-Wreorder]
   FFT_SCALAR ***vdxy_brick_dipole,***vdxz_brick_dipole,***vdyz_brick_dipole;
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.h:61:59: warning:   'FFT_SCALAR*** LAMMPS_NS::PPPMDipole::vdzz_brick_dipole' [-Wreorder]
   FFT_SCALAR ***vdxx_brick_dipole,***vdyy_brick_dipole,***vdzz_brick_dipole;
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:60:1: warning:   when initialized here [-Wreorder]
 PPPMDipole::PPPMDipole(LAMMPS *lmp) : PPPM(lmp),
 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp: In member function 'virtual void LAMMPS_NS::PPPMDipole::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:537:13: warning: unused variable 'q' [-Wunused-variable]
     double *q = atom->q;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:540:9: warning: unused variable 'ntotal' [-Wunused-variable]
     int ntotal = nlocal;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp: In member function 'double LAMMPS_NS::PPPMDipole::compute_qopt_dipole()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:929:10: warning: variable 'cnx' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:929:14: warning: variable 'cny' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:929:18: warning: variable 'cnz' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:932:10: warning: variable 'numerator' set but not used [-Wunused-but-set-variable]
   double numerator,denominator;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:933:13: warning: unused variable 'u2' [-Wunused-variable]
   double u1,u2,u3,sqk;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:933:16: warning: unused variable 'u3' [-Wunused-variable]
   double u1,u2,u3,sqk;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp: In member function 'void LAMMPS_NS::PPPMDipole::compute_gf_dipole()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:1024:10: warning: variable 'cnx' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:1024:14: warning: variable 'cny' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:1024:18: warning: variable 'cnz' set but not used [-Wunused-but-set-variable]
   double cnx,cny,cnz;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:1027:10: warning: variable 'numerator' set but not used [-Wunused-but-set-variable]
   double numerator,denominator;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp: In member function 'virtual void LAMMPS_NS::PPPMDipole::slabcorr()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:2392:12: warning: unused variable 'x' [-Wunused-variable]
   double **x = atom->x;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole.cpp:2393:10: warning: unused variable 'zprd' [-Wunused-variable]
   double zprd = domain->zprd;
          ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_disp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_disp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_disp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp: In member function 'virtual void LAMMPS_NS::PPPMDipoleSpin::slabcorr()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp:666:12: warning: unused variable 'x' [-Wunused-variable]
   double **x = atom->x;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp:667:10: warning: unused variable 'zprd' [-Wunused-variable]
   double zprd = domain->zprd;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp:672:10: warning: unused variable 'spx' [-Wunused-variable]
   double spx,spy,spz;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_dipole_spin.cpp:672:14: warning: unused variable 'spy' [-Wunused-variable]
   double spx,spy,spz;
              ^
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_disp_tip4p.cpp.o
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[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE/pppm_stagger.cpp.o
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[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/fix_qeq_comb.cpp: In member function 'virtual void LAMMPS_NS::FixQEQComb::post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/fix_qeq_comb.cpp:163:32: warning: 'ilist' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,ii,iloop,loopmax,inum,*ilist;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/fix_qeq_comb.cpp:163:26: warning: 'inum' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,ii,iloop,loopmax,inum,*ilist;
                          ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo_morse.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:3394:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:3395:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_adp.cpp:629:66: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fp,filename,file->nr,&file->z2r[i][j][1]);
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::TORSION(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:1236:64: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ev_tally4(i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl);
                                                                ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp: In member function 'virtual void LAMMPS_NS::PairATM::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp:313:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp:316:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&nu[i][j][k],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp: In member function 'virtual void LAMMPS_NS::PairATM::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp:341:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_atm.cpp:342:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_triple,sizeof(double),1,fp);
                                           ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp: In member function 'void LAMMPS_NS::PairBOP::read_table(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:4979:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);  // skip first comment line
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:4980:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:4985:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5014:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5082:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);  // skip first comment line
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5084:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5086:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5090:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5095:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5099:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5101:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5103:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5112:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5119:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5123:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5127:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5129:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5133:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5135:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5139:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5141:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5145:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5147:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5151:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5153:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5157:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5159:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5161:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5170:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5177:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5185:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5193:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5201:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5208:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5212:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5229:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Spbicubic(double, double, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:4171:49: warning: 'yn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (j > 0) df[1] += c * ((double) j) * xn * yn1;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Sptricubic(double, double, double, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:4211:46: warning: 'zn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (k > 0) df[2] += c * kr * xn * yn * zn1;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:5220:5: warning: 'nws' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(nws==3) {
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:4965:13: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,j,k,n,m;
             ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::FLJ(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:806:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair = dC*dwij / rij;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:850:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:845:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:845:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:850:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:821:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:817:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkjS / rikS;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:840:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:845:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:850:45: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:845:45: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:821:40: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:840:45: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:876:76: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
             v_tally4(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS);
                                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_airebo.cpp:876:76: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::read_lib()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:326:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:327:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:338:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:350:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:358:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:366:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:375:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLIB,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:384:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLIB,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:391:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLIB,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:404:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:422:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:431:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
              fgets(s,MAXLIB,fp);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:446:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:464:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:473:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(s,MAXLIB,fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:488:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:506:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLIB,fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:515:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(s,MAXLIB,fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::comb_zetaterm_d(double, double, double, double, double, double*, double, double*, double, double*, double*, double*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:2309:44: warning: 'com6' may be used uninitialized in this function [-Wmaybe-uninitialized]
             {com6+=prefac_ij2*pcrossk*dfc_k;}
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp: In member function 'double LAMMPS_NS::PairBOP::sigmaBo(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1758:42: warning: 'dis_jk[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1758:62: warning: 'dis_jk[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1759:35: warning: 'dis_jk[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         +dis_ik[2]*dis_jk[2])/(r_ik*r_jk);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1770:51: warning: 'r_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     dcA_ikj[2][1]=(-dis_ik[2]*r_ik*r_jk-cosAng_ikj
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:1495:38: warning: 'temp_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
             bt_sg[nb_jk].temp=temp_jk;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_bop.cpp:3636:30: warning: 'temp_ji' may be used uninitialized in this function [-Wmaybe-uninitialized]
               else if(temp_kk==temp_ji&&setting==0) {
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::force_zeta(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double, double, double, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, int, double&, double, double, int, int, int, double, double, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:1794:48: warning: 'prady' may be used uninitialized in this function [-Wmaybe-uninitialized]
      prady  += 1.0 *  btor[2] * bbtor * att_eng;
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:1793:48: warning: 'pradx' may be used uninitialized in this function [-Wmaybe-uninitialized]
      pradx  += 1.0 *  btor[1] * bbtor * att_eng;
                                                ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::direct(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, int, int, int, double, double, double, double, double, double, double, double, double&, double&, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:2799:20: warning: 'dcurlji' may be used uninitialized in this function [-Wmaybe-uninitialized]
    smf1n += dcurlji*iq*(afbn-fafbnl)*esucon/r;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_comb3.cpp:2802:20: warning: 'dcurlij' may be used uninitialized in this function [-Wmaybe-uninitialized]
    smf1j += dcurlij*jq*(afbj-fafbnl)*esucon/r;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp: In member function 'virtual void LAMMPS_NS::PairEAM::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp:469:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp:470:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp:472:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp: In member function 'void LAMMPS_NS::PairEAM::grab(FILE*, int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam.cpp:787:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloy::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:191:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_alloy.cpp:204:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFS::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:193:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp: In member function 'int LAMMPS_NS::PairEIM::grabpair(FILE*, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp:969:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(line,MAXLINE,fptr);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eim.cpp:973:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(line,MAXLINE,fptr);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp: In member function 'virtual void LAMMPS_NS::PairEAMCD::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_cd.cpp:386:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair += D_i * rhojp * t1;
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_eam_fs.cpp:209:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw_zbl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw_zbl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_gw_zbl.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_nb3b_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_nb3b_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_nb3b_harmonic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp: In member function 'void LAMMPS_NS::PairLCBOP::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:981:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:987:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:988:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:989:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&gamma_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:990:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&A);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:991:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:992:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:993:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&alpha);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:994:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:995:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:996:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&d);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:997:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:998:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_4);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:999:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_6);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1000:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&L);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1001:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&kappa);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1002:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_0);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1003:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1004:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_0);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1005:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1_LR);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1006:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2_LR);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1007:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1008:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1009:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1010:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1011:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&lambda_1);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1012:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&lambda_2);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1013:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1014:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&delta);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1017:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1026:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(s,MAXLINE,fp);
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1033:40: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         while (1) { fgets(s,MAXLINE,fp); if (s[0] != '#') break; }
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1040:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_lcbop.cpp:1046:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_rebo.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_rebo.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_rebo.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:576:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:577:60: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     while (line == strchr(line,'#')) fgets(line,MAXLINE,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:593:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:611:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:647:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'void LAMMPS_NS::PairPolymorphic::grab(FILE*, int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:878:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_sw.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_sw.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_sw.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff_mod.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_tersoff_mod.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:259:7: warning: 'emb' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (emb > epsilon) {
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:287:82: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally(i,i,nlocal,newton_pair,evdwl,0.0,0.0,delx,dely,delz);
                                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:287:82: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY/pair_polymorphic.cpp:287:82: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
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[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_atom_swap.cpp: In member function 'int LAMMPS_NS::FixAtomSwap::attempt_semi_grand()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_atom_swap.cpp:384:54: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
         atom->v[i][0] *= sqrt_mass_ratio[itype][jtype];
                                                      ^
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_tfmc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_tfmc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_tfmc.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp: In member function 'virtual void LAMMPS_NS::FixBondSwap::post_integrate()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:628:44: warning: 'jlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jangle = 0; jangle < num_angle[jlast]; jangle++) {
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:606:44: warning: 'jprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jangle = 0; jangle < num_angle[jprev]; jangle++) {
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:201:25: warning: 'jnext' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:617:44: warning: 'ilast' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (iangle = 0; iangle < num_angle[ilast]; iangle++) {
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:490:39: warning: 'iprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (iprev >= 0) iprevtag = tag[iprev];
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:201:7: warning: 'inext' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:413:53: warning: 'jnextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(jnextangletype,i,jnext,jlast) +
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:418:49: warning: 'jangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(jangletype,jprev,j,jnext) -
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:417:53: warning: 'inextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(inextangletype,i,inext,ilast) -
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:412:56: warning: 'iangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             delta += angle_eng(iangletype,iprev,i,jnext) +
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_bond_swap.cpp:456:37: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jbond = 0; jbond < num_bond[j]; jbond++)
                                     ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/fix_client_md.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/fix_client_md.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/fix_client_md.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:348:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:352:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:353:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:381:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:382:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&max_cell_size,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:383:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:384:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/pair_dsmc.cpp:385:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp: In member function 'double LAMMPS_NS::FixGCMC::energy_full()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC/fix_gcmc.cpp:2293:11: warning: 'imolecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (imolecule == molecule[j]) continue;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp: In member function 'void LAMMPS_NS::Message::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/message.cpp:64:3: warning: 'clientserver' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (clientserver == 1) {
   ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_md.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_md.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_md.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp: In member function 'void LAMMPS_NS::Server::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server.cpp:43:3: warning: 'protocol' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (protocol == MD) {
   ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/compute_msd_nongauss.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/compute_msd_nongauss.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/compute_msd_nongauss.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp: In member function 'void LAMMPS_NS::ServerMC::loop()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:116:28: warning: 'xold[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
           x[m][2] = xold[2];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:115:28: warning: 'xold[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
           x[m][1] = xold[1];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:114:28: warning: 'xold[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
           x[m][0] = xold[0];
                            ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:15:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/atom.h:301:57: warning: 'atomid' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else if (map_style == 2) return map_find_hash(global);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE/server_mc.cpp:42:10: note: 'atomid' was declared here
   tagint atomid;
          ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/compute_ti.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/compute_ti.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/compute_ti.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_deposit.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_deposit.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_deposit.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_efield.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_efield.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_efield.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'int sizeofint(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:558:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   while (size >= num && num_of_bits < 32) {
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'int sizeofints(int, unsigned int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:599:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   while (bytes[num_of_bytes] >= num) {
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'void sendints(int*, int, int, unsigned int*, unsigned int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:653:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   if (num_of_bits >= num_of_bytes * 8) {
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:654:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (i = 0; i < num_of_bytes; i++) {
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:659:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (i = 0; i < num_of_bytes-1; i++) {
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'int receivebits(int*, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:694:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (lastbits < num_of_bits) {
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp: In function 'int xdr3dfcoord(XDR*, float*, int*, float*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:396:54: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define LASTIDX (sizeof(magicints) / sizeof(int) - 1 )
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:934:23: note: in expansion of macro 'LASTIDX'
     while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:45:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:938:14: note: in expansion of macro 'MYMIN'
     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:45:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:1114:14: note: in expansion of macro 'MYMIN'
     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
              ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:1140:54: warning: 'bitsizeint[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[2] = receivebits(buf, bitsizeint[2]);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:1139:54: warning: 'bitsizeint[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[1] = receivebits(buf, bitsizeint[1]);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/dump_xtc.cpp:1138:54: warning: 'bitsizeint[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[0] = receivebits(buf, bitsizeint[0]);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_deposit.cpp: In member function 'virtual void LAMMPS_NS::FixDeposit::pre_exchange()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_deposit.cpp:529:56: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else atom->avec->create_atom(ntype+onemols[imol]->type[m],coords[m]);
                                                        ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_gld.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_gld.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_gld.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_oneway.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_oneway.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_oneway.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_orient_bcc.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_orient_bcc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_orient_bcc.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp: In member function 'virtual void LAMMPS_NS::FixEvaporate::pre_exchange()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/fix_evaporate.cpp:322:31: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         } else if (me == proc && i == iatom) {
                               ^
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[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:321:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:325:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:326:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:327:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:328:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:329:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:359:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:360:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:361:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut.cpp:362:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:372:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:376:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:377:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:378:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:379:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:380:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:381:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:413:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:414:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:415:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:416:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:417:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:477:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
                                                                 ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/xdr_compat.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/xdr_compat.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/xdr_compat.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:149:58: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                         r0n[itype][jtype]*rninv -
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_cut.cpp:151:58: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                         r0m[itype][jtype]*rminv) -
                                                          ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:416:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:420:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:421:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:422:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:423:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:424:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:457:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:458:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:459:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:460:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:461:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:462:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:463:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_delta.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_delta.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_delta.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:549:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:549:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:552:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:547:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:559:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:182:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:187:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:192:50: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (mm[itype][jtype]*r0n[itype][jtype]*rninv -
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:193:50: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:184:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC/pair_nm_cut_coul_long.cpp:184:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp: In member function 'virtual void LAMMPS_NS::AngleCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp:248:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp:249:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp:250:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k_ub[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_charmm.cpp:251:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r_ub[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp: In member function 'virtual void LAMMPS_NS::AngleCosine::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine.cpp:196:70: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (comm->me == 0) fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                                      ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp: In member function 'virtual void LAMMPS_NS::AngleCosinePeriodic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp:249:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp:250:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b[1],sizeof(int),atom->nangletypes,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_periodic.cpp:251:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineSquared::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp:218:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_cosine_squared.cpp:219:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp: In member function 'virtual void LAMMPS_NS::AngleHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp:218:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_harmonic.cpp:219:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp: In member function 'virtual void LAMMPS_NS::AngleTable::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp:312:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/angle_table.cpp:313:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_angle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_angle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_angle.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_bond.cpp.o
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[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_template.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_template.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/atom_vec_template.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp: In member function 'virtual void LAMMPS_NS::BondFENE::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp:218:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp:219:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp:220:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene.cpp:221:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp: In member function 'virtual void LAMMPS_NS::BondFENEExpand::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:227:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:228:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:229:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:230:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_fene_expand.cpp:231:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp: In member function 'virtual void LAMMPS_NS::BondGromos::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp:169:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_gromos.cpp:170:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp:170:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_harmonic.cpp:171:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp: In member function 'virtual void LAMMPS_NS::BondMorse::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp:174:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&d0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp:175:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_morse.cpp:176:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp: In member function 'virtual void LAMMPS_NS::BondNonlinear::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp:169:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp:170:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_nonlinear.cpp:171:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&lamda[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp: In member function 'virtual void LAMMPS_NS::BondQuartic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:278:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:279:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b1[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:280:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b2[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:281:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&rc[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_quartic.cpp:282:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&u0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp: In member function 'virtual void LAMMPS_NS::BondTable::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp:255:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/bond_table.cpp:256:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:426:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:427:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:428:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:429:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmm.cpp:430:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weightflag,sizeof(int),1,fp);
                                        ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmmfsw::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:469:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:470:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:471:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:472:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_charmmfsw.cpp:473:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weightflag,sizeof(int),1,fp);
                                        ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp:330:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp:331:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sign[1],sizeof(int),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_harmonic.cpp:332:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/fix_cmap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/fix_cmap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/fix_cmap.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp: In member function 'virtual void LAMMPS_NS::DihedralHelix::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp:325:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp:326:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_helix.cpp:327:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralMultiHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:321:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:322:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:323:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:324:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a4[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_multi_harmonic.cpp:325:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a5[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp: In member function 'virtual void LAMMPS_NS::DihedralOPLS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp:333:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp:334:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp:335:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/dihedral_opls.cpp:336:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:336:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:337:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sign[1],sizeof(int),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:338:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->nimpropertypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:206:15: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       pd = -pd;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_cvff.cpp:205:18: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
       p = 2.0 - p;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp:277:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_harmonic.cpp:278:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp: In member function 'virtual void LAMMPS_NS::ImproperUmbrella::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp:318:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kw[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp:319:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&w0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/improper_umbrella.cpp:320:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp:149:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp:298:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (donor_flag == 0) type2param[i][j][k] = nparams;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingLJ::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp:508:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else k = atom->map(klist[kk]+tagprev);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp:119:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:377:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:381:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:382:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:383:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:384:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:438:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:439:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:440:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_inner,sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:441:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:442:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:443:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_lj.cpp:371:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (donor_flag == 0) type2param[i][j][k] = nparams;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingMorse::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_hbond_dreiding_morse.cpp:411:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else k = atom->map(klist[kk]+tagprev);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmm::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:500:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:198:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:166:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:131:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:131:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/atom_vec_peri.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/atom_vec_peri.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/atom_vec_peri.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:435:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:439:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:440:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:441:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:442:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:472:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:473:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:474:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:475:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:476:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:620:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:624:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:625:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:626:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:662:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:663:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:664:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:665:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:666:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:668:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:669:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:670:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:671:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:672:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:532:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       philj6 = -lj4[itype][jtype]*r6inv +
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:527:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:477:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:504:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:505:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:506:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:507:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:508:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:510:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:194:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl6 = -lj4[itype][jtype]*r6inv +
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:192:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl12 = r6inv*lj3[itype][jtype]*r6inv -
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:335:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:334:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:262:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_tip4p_cut.cpp:258:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:377:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:376:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:304:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:300:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_damage_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_damage_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_damage_atom.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_plasticity_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_plasticity_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_plasticity_atom.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/fix_peri_neigh.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/fix_peri_neigh.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/fix_peri_neigh.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeDilatationAtom::compute_peratom()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/compute_dilatation_atom.cpp:104:11: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
   double *theta;
           ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriEPS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:567:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:571:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:572:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:573:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:574:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:575:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_eps.cpp:576:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_yieldstress[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriLPS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:492:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:496:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:497:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:498:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:499:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_lps.cpp:500:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp: In member function 'virtual void LAMMPS_NS::PairPeriPMB::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:421:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:425:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&kspring[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:426:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:427:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_pmb.cpp:428:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_dynamic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_dynamic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_dynamic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp: In member function 'virtual void LAMMPS_NS::PairPeriVES::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:550:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:554:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:555:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:556:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:557:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:558:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:559:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_lambdai[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI/pair_peri_ves.cpp:560:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_taubi[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp: In member function 'virtual int LAMMPS_NS::FixQEq::pack_forward_comm(int, int*, double*, int, int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq.cpp:480:10: warning: 'm' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return m;
          ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_fire.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_fire.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_fire.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp: In member function 'void LAMMPS_NS::FixPOEMS::readfile(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS/fix_poems.cpp:985:26: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (me == 0) fclose(fp);
                          ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_point.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_point.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_point.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_shielded.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_shielded.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_shielded.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ/fix_qeq_slater.cpp.o
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[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/hyper.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/hyper.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/hyper.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp: In member function 'virtual void LAMMPS_NS::FixHyperGlobal::pre_reverse(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp:305:20: warning: 'r0max' may be used uninitialized in this function [-Wmaybe-uninitialized]
     fbiasr = fbias / r0max / rmax;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp:305:34: warning: 'rmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
     fbiasr = fbias / r0max / rmax;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp:226:18: warning: 'jmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,j,m,imax,jmax;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_global.cpp:226:13: warning: 'imax' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,j,m,imax,jmax;
             ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/neb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/neb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/neb.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/prd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/prd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/prd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_local.cpp: In member function 'virtual void LAMMPS_NS::FixHyperLocal::pre_reverse(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_hyper_local.cpp:479:27: warning: 'ijhalf' may be used uninitialized in this function [-Wmaybe-uninitialized]
     maxhalf[iold] = ijhalf;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp: In member function 'virtual void LAMMPS_NS::FixNEB::min_post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp:615:45: warning: 'lenuntilIm' may be used uninitialized in this function [-Wmaybe-uninitialized]
       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp:615:45: warning: 'idealPos' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/fix_neb.cpp:615:58: warning: 'meanDist' may be used uninitialized in this function [-Wmaybe-uninitialized]
       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
                                                          ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/tad.cpp.o
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[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA/temper.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_ehex.cpp: In member function 'virtual void LAMMPS_NS::FixEHEX::init()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_ehex.cpp:198:48: warning: 'id_shake' may be used uninitialized in this function [-Wmaybe-uninitialized]
      fshake = ((FixShake*) modify->fix[id_shake]);
                                                ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nh.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nh.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nh_small.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nh_small.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nh_small.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In constructor 'LAMMPS_NS::FixRigid::FixRigid(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:579:51: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (langflag) random = new RanMars(lmp,seed + me);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:396:30: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][2] = zflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:395:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][1] = yflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:394:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][0] = xflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:358:34: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (domain->dimension == 2 && zflag == 1.0)
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:364:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fflag[m-1][1] = yflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:363:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fflag[m-1][0] = xflag;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:224:32: warning: 'molecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (custom_flag) delete [] molecule;
                                ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph_small.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph_small.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nph_small.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_npt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_npt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_npt.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_npt_small.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_npt_small.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_npt_small.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_xv()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1482:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1477:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1461:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1405:50: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1404:60: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1404:50: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                  ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nve.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nve.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nve.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_v()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1627:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1614:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1576:40: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x1 = x[i][1] + ybox*yprd + zbox*yz;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1575:50: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:1575:40: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2223:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           radone = lbonus[line[i]].length;
                                  ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nve_small.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nve_small.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nve_small.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::readfile(int, double*, double**, double**, double**, LAMMPS_NS::imageint*, int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2296:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
                                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_static()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2122:32: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (inpfile && inbody[ibody]) continue;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2103:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2020:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         orient[i][0] = lbonus[line[i]].theta - theta_body;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid.cpp:2085:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_nvt_small.cpp.o
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[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_append_atoms.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_append_atoms.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_append_atoms.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_msst.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_msst.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_msst.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_nphug.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_nphug.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_nphug.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidSmall::write_restart_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2659:26: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (me == 0) fclose(fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_xv()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1394:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1389:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1374:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_v()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1532:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:1519:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_wall_piston.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_wall_piston.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK/fix_wall_piston.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In constructor 'LAMMPS_NS::FixRigidSmall::FixRigidSmall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:515:57: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (langflag) random = new RanMars(lmp,seed + comm->me);
                                                         ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/atom_vec_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/atom_vec_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/atom_vec_spin.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2380:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           radone = lbonus[line[i]].length;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::readfile(int, double**, int*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2466:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
                                                                   ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/compute_spin.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/compute_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/compute_spin.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_static()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2264:32: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (inpfile && inbody[ibody]) continue;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2242:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2157:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         orient[i][0] = lbonus[line[i]].theta - theta_body;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID/fix_rigid_small.cpp:2224:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/fix_langevin_spin.cpp.o
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[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/fix_neb_spin.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/min_spin.cpp: In member function 'void LAMMPS_NS::MinSpin::advance_spins(double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/min_spin.cpp:245:10: warning: unused variable 'msq' [-Wunused-variable]
   double msq,scale,fm2,energy,dts2;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/min_spin.cpp:245:14: warning: unused variable 'scale' [-Wunused-variable]
   double msq,scale,fm2,energy,dts2;
              ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleCut::compute_single_pair(int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:326:8: warning: unused variable 'ilist' [-Wunused-variable]
   int *ilist,*jlist,*numneigh,**firstneigh;  
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:503:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:507:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
    fread(&cut_spin_long[i][j],sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:532:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_long_global,sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_cut.cpp:533:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleLong::compute_single_pair(int, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:360:8: warning: variable 'ilist' set but not used [-Wunused-but-set-variable]
   int *ilist,*jlist,*numneigh,**firstneigh;  
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:572:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:576:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_long[i][j],sizeof(int),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDipoleLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:601:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_long_global,sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dipole_long.cpp:602:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDmi::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:535:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:539:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&DM[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:540:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_dmx[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:541:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_dmy[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:542:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_dmz[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:543:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&vmech_dmx[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:544:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&vmech_dmy[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:545:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&vmech_dmz[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:546:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_dmi[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp: In member function 'virtual void LAMMPS_NS::PairSpinDmi::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:580:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_dmi_global,sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:581:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_dmi.cpp:582:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp: In member function 'virtual void LAMMPS_NS::PairSpinExchange::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:500:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:504:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&J1_mag[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:505:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&J1_mech[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:506:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&J2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:507:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&J2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:508:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_exchange[i][j],sizeof(double),1,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp: In member function 'virtual void LAMMPS_NS::PairSpinExchange::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:539:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_exchange_global,sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:540:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_exchange.cpp:541:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp: In member function 'virtual void LAMMPS_NS::PairSpinMagelec::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:519:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:523:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&ME[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:524:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_mex[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:525:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_mey[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:526:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&v_mez[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:527:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_magelec[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp: In member function 'virtual void LAMMPS_NS::PairSpinMagelec::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:557:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_magelec_global,sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:558:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_magelec.cpp:559:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_sna_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_sna_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_sna_atom.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snad_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snad_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snad_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp: In member function 'virtual void LAMMPS_NS::PairSpinNeel::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:690:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:694:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&g1[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:695:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&g1_mech[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:696:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&g2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:697:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&g2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:698:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&q1[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:699:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&q1_mech[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:700:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&q2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:701:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&q2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:702:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_spin_neel[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp: In member function 'virtual void LAMMPS_NS::PairSpinNeel::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:736:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_spin_neel_global,sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:737:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN/pair_spin_neel.cpp:738:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snav_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snav_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/compute_snav_atom.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp: In member function 'void LAMMPS_NS::PairSNAP::compute_bispectrum()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp:276:15: warning: unused variable 'numneigh' [-Wunused-variable]
   int *jlist,*numneigh,**firstneigh;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/pair_snap.cpp:276:26: warning: unused variable 'firstneigh' [-Wunused-variable]
   int *jlist,*numneigh,**firstneigh;
                          ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp: In member function 'void LAMMPS_NS::SNA::compute_zi()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:351:7: warning: unused variable 'ma2' [-Wunused-variable]
   int ma2, mb2;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:351:12: warning: unused variable 'mb2' [-Wunused-variable]
   int ma2, mb2;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp: In member function 'void LAMMPS_NS::SNA::compute_yi(const double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:436:9: warning: unused variable 'mb' [-Wunused-variable]
     int mb = (2 * (mb1min+mb2max) - j1 - j2 + j) / 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:437:9: warning: unused variable 'ma' [-Wunused-variable]
     int ma = (2 * (ma1min+ma2max) - j1 - j2 + j) / 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:408:7: warning: unused variable 'j' [-Wunused-variable]
   int j;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:409:7: warning: unused variable 'jjz' [-Wunused-variable]
   int jjz;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:423:7: warning: unused variable 'ma2' [-Wunused-variable]
   int ma2, mb2;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:423:12: warning: unused variable 'mb2' [-Wunused-variable]
   int ma2, mb2;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp: In member function 'void LAMMPS_NS::SNA::compute_deidrj(double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:550:11: warning: unused variable 'ma' [-Wunused-variable]
       int ma = mb;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp: In member function 'void LAMMPS_NS::SNA::compute_dbidrj()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:709:11: warning: unused variable 'ma' [-Wunused-variable]
       int ma = mb;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:759:11: warning: unused variable 'ma' [-Wunused-variable]
       int ma = mb;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:809:11: warning: unused variable 'ma' [-Wunused-variable]
       int ma = mb;
           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:659:12: warning: unused variable 'jjjzarray_r' [-Wunused-variable]
   double** jjjzarray_r;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:660:12: warning: unused variable 'jjjzarray_i' [-Wunused-variable]
   double** jjjzarray_i;
            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:661:10: warning: unused variable 'jjjmambzarray_r' [-Wunused-variable]
   double jjjmambzarray_r;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP/sna.cpp:662:10: warning: unused variable 'jjjmambzarray_i' [-Wunused-variable]
   double jjjmambzarray_i;
          ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/fix_store_kim.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/fix_store_kim.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/fix_store_kim.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp: In constructor 'LAMMPS_NS::FixWallSRD::FixWallSRD(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_wall_srd.cpp:65:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp: In member function 'void LAMMPS_NS::KimInit::do_init(char*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_init.cpp:294:7: warning: variable 'kimerror' set but not used [-Wunused-but-set-variable]
   int kimerror;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_static()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2965:25: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       c1 = tbonus[tri[i]].c1;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2953:30: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       length = lbonus[line[i]].length;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2937:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = ebonus[ellipsoid[i]].shape;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_dynamic()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:3048:30: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       inertia = tbonus[tri[i]].inertia;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:3035:40: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       biglist[k].theta = lbonus[line[i]].theta;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:3023:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = ebonus[ellipsoid[i]].shape;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp: In member function 'void LAMMPS_NS::KimQuery::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:92:9: warning: variable 'varname' set but not used [-Wunused-but-set-variable]
   char *varname, *function, *value;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:92:19: warning: variable 'function' set but not used [-Wunused-but-set-variable]
   char *varname, *function, *value;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:92:30: warning: unused variable 'value' [-Wunused-variable]
   char *varname, *function, *value;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:98:10: warning: variable 'model_name' set but not used [-Wunused-but-set-variable]
   char * model_name;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_query.cpp:108:8: warning: variable 'split' set but not used [-Wunused-but-set-variable]
   bool split = false;
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::reset_velocities()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1016:33: warning: 'dof_tstat' may be used uninitialized in this function [-Wmaybe-uninitialized]
       tbin = vbin[i].value[0]/(n-dof_tstat) * tfactor;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::parameterize()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2682:37: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double *c1 = tbonus[tri[i]].c1;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2702:41: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double length = lbonus[line[i]].length;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:2699:46: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double *shape = ebonus[ellipsoid[i]].shape;
                                              ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/pair_kim.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/pair_kim.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/pair_kim.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp: In member function 'void LAMMPS_NS::KimInteractions::do_setup(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_interactions.cpp:147:5: warning: 'fixed_types' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (!fixed_types) {
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp: In function 'double {anonymous}::get_temperature_conversion_factor({anonymous}::units, {anonymous}::units)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM/kim_units.cpp:1019:10: warning: unused variable 'to_si' [-Wunused-variable]
   double to_si;
          ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::collisions_multi()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1547:33: warning: 'xbcollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[2] = xbcollfirst[2];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1546:33: warning: 'xbcollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[1] = xbcollfirst[1];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1545:33: warning: 'xbcollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[0] = xbcollfirst[0];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1544:33: warning: 'xscollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[2] = xscollfirst[2];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1543:33: warning: 'xscollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[1] = xscollfirst[1];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1542:33: warning: 'xscollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[0] = xscollfirst[0];
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1550:29: warning: 'normfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[2] = normfirst[2];
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1549:29: warning: 'normfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[1] = normfirst[1];
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1548:29: warning: 'normfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[0] = normfirst[0];
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1575:32: warning: 'typefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (collidestyle == SLIP && type == SPHERE)
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD/fix_srd.cpp:1580:33: warning: 'jfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
         force_wall(v[i],vsnew,j);
                                 ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp:88:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::post_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_invoke.cpp:105:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
              ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/pair_python.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/pair_python.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/pair_python.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::init()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:139:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_init, NULL);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:157:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_initial_integrate, arglist);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:175:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_final_integrate, NULL);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate_respa(int, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:193:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_initial_integrate_respa, arglist);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate_respa(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:212:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_final_integrate_respa, arglist);
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::reset_dt()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/fix_python_move.cpp:230:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_reset_dt, NULL);
              ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_atom_mpiio.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_atom_mpiio.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_atom_mpiio.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp: In member function 'int LAMMPS_NS::PythonImpl::create_entry(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp:412:47: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   else if (format && strlen(format) != ninput+noutput)
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp: In member function 'virtual void LAMMPS_NS::PythonImpl::invoke_function(int, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON/python_impl.cpp:322:36: warning: 'pValue' may be used uninitialized in this function [-Wmaybe-uninitialized]
     PyTuple_SetItem(pArgs,i,pValue);
                                    ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_cfg_mpiio.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_cfg_mpiio.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_cfg_mpiio.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_custom_mpiio.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_custom_mpiio.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO/dump_custom_mpiio.cpp
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[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp: In member function 'void LAMMPS_NS::ComputeVoronoi::processCell(voro::voronoicell_neighbor&, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp:514:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for (j=0; j<narea.size(); ++j)
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp:529:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       if (neighs != narea.size())
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp:546:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         for( j=0; j<vlist.size(); j+=vlist[j]+1 ) {
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI/compute_voronoi_atom.cpp:590:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       if (neighs != narea.size())
                                ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/fix_bocs.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/fix_bocs.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/fix_bocs.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna2_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna2_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna2_fene.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'double LAMMPS_NS::ComputePressureBocs::get_cg_p_corr(double**, int, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp:250:10: warning: 'correction' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return correction;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'virtual double LAMMPS_NS::ComputePressureBocs::compute_scalar()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp:347:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       scalar = (temperature->dof * boltz * t +
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'virtual void LAMMPS_NS::ComputePressureBocs::compute_vector()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS/compute_pressure_bocs.cpp:394:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
                               ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/fix_nve_dot.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/fix_nve_dot.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/fix_nve_dot.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp: In member function 'virtual void LAMMPS_NS::BondOxdnaFene::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp:382:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp:383:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&Delta[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/bond_oxdna_fene.cpp:384:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/fix_nve_dotc_langevin.cpp.o
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[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp.o
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[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:685:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:832:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:837:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&k_cxst[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:838:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_0[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:839:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_c[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:840:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_lo[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:841:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_hi[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:842:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_lc[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:843:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_hc[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:844:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst_lo[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:845:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst_hi[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:847:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:848:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst1_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:849:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst1_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:850:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:851:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst1_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:853:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:854:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst4_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:855:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst4_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:856:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:857:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst4_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:859:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst5[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:860:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst5_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:861:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst5_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:862:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst5[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:863:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst5_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:865:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst6[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:866:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst6_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:867:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst6_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:868:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst6[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:869:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst6_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:871:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&AA_cxst1[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:872:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&BB_cxst1[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Coaxstk::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:936:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:937:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_coaxstk.cpp:938:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:367:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:453:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:458:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&kappa_dh[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:459:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&qeff_dh_pf[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:460:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_dh[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:461:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_dh_ast[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:462:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_dh_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp: In member function 'virtual void LAMMPS_NS::PairOxdna2Dh::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:495:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:496:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna2_dh.cpp:497:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:831:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:571:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:991:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:996:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&k_cxst[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:997:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_0[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:998:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_c[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:999:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_lo[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1000:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_hi[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1001:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_lc[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1002:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_cxst_hc[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1003:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst_lo[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1004:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst_hi[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1006:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1007:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst1_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1008:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst1_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1009:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1010:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst1_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1012:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1013:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst4_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1014:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst4_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:713:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:718:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_ss[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1015:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:719:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_ss[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1016:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst4_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:720:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_ss_ast[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1018:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst5[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:721:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_ss[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1019:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst5_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:722:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_ss_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:723:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_sb[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1020:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst5_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:724:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_sb[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1021:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst5[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:725:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_sb_ast[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1022:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst5_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:726:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_sb[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1024:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst6[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:727:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_sb_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:728:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_bb[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1025:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_cxst6_0[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:729:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_bb[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1026:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst6_ast[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:730:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_bb_ast[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1027:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst6[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:731:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_bb[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1028:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_cxst6_c[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:732:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_bb_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1030:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst3p[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1031:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_cxst3p_ast[i][j],sizeof(double),1,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1032:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst3p[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1033:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_cxst3p_c[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1034:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_cxst4p[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1035:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_cxst4p_ast[i][j],sizeof(double),1,fp);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaExcv::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:775:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1036:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_cxst4p[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:776:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1037:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_cxst4p_c[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_excv.cpp:777:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaCoaxstk::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1107:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1108:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_coaxstk.cpp:1109:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:797:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:976:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:981:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_hb[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:982:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:983:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_0[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:984:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:985:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_lo[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:986:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_hi[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:987:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_lc[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:988:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_hb_hc[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:989:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb_lo[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:990:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb_hi[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:991:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shift_hb[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:993:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb1[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:994:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb1_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:995:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb1_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:996:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb1[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:997:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb1_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:999:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb2[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1000:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb2_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1001:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb2_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1002:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb2[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1003:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb2_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1005:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb3[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1006:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb3_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1007:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb3_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1008:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb3[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1009:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb3_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1011:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb4[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1012:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb4_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1013:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb4_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1014:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb4[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1015:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb4_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1017:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb7[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1018:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb7_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1019:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb7_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1020:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb7[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1021:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb7_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1023:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_hb8[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1024:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_hb8_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1025:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb8_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1026:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_hb8[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1027:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_hb8_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaHbond::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1102:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1103:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_hbond.cpp:1104:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:920:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1082:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1087:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_st[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1088:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1089:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_0[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1090:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_c[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1091:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_lo[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1092:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_hi[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1093:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_lc[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1094:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_st_hc[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1095:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st_lo[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1096:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st_hi[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1097:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shift_st[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1099:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st4[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1100:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_st4_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1101:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st4_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1102:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st4[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1103:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st4_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1105:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st5[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1106:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_st5_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1107:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st5_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1108:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st5[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1109:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st5_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1111:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st6[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1112:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_st6_0[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1113:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st6_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1114:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st6[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1115:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_st6_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1117:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st1[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1118:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_st1_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1119:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st1[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1120:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_st1_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1121:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_st2[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1122:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_st2_ast[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1123:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_st2[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1124:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cosphi_st2_c[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaStk::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1190:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1191:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_stk.cpp:1192:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:785:7: warning: variable 'irequest' set but not used [-Wunused-but-set-variable]
   int irequest;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:950:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:955:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&k_xst[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:956:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_0[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:957:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_c[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:958:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_lo[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:959:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_hi[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:960:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_lc[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:961:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_xst_hc[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:962:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst_lo[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:963:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst_hi[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:965:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst1[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:966:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst1_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:967:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst1_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:968:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst1[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:969:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst1_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:971:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst2[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:972:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst2_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:973:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst2_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:974:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst2[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:975:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst2_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:977:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst3[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:978:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst3_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:979:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst3_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:980:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst3[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:981:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst3_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:983:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst4[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:984:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst4_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:985:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst4_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:986:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst4[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:987:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst4_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:989:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst7[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:990:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst7_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:991:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst7_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:992:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst7[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:993:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst7_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:995:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a_xst8[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:996:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&theta_xst8_0[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:997:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst8_ast[i][j],sizeof(double),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:998:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b_xst8[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:999:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&dtheta_xst8_c[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp: In member function 'virtual void LAMMPS_NS::PairOxdnaXstk::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1072:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1073:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA/pair_oxdna_xstk.cpp:1074:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_edpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_edpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_edpd.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_mdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_mdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_mdpd.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_tdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_tdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/atom_vec_tdpd.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/compute_edpd_temp_atom.cpp.o
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[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/compute_tdpd_cc_atom.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd_rhosum.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd_rhosum.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd_rhosum.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:455:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:459:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:460:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:461:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&power[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:462:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:463:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&kappa[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:464:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&powerT[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:465:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cutT[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:468:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&sc[i][j][k],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:472:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&kc[i][j][k],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:510:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:511:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:512:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp: In member function 'virtual void LAMMPS_NS::PairMDPD::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:350:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:354:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&A_att[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:355:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&B_rep[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:356:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:357:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:358:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_r[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp: In member function 'virtual void LAMMPS_NS::PairMDPD::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:388:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&temperature,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:389:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:390:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_mdpd.cpp:391:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp: In member function 'virtual void LAMMPS_NS::PairEDPD::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:221:34: warning: 'dQr' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Q[j]    -= ( dQc - dQd + dQr );
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:221:28: warning: 'dQd' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Q[j]    -= ( dQc - dQd + dQr );
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_edpd.cpp:221:28: warning: 'dQc' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp: In member function 'virtual void LAMMPS_NS::PairTDPD::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:397:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:401:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:402:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:403:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&power[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:404:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:405:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cutcc[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:407:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&kappa[i][j][k],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:408:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&epsilon[i][j][k],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:409:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fread(&powercc[i][j][k],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp: In member function 'virtual void LAMMPS_NS::PairTDPD::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:445:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&temperature,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:446:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:447:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO/pair_tdpd.cpp:448:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp: In member function 'virtual void LAMMPS_NS::AngleSDK::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp:335:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp:336:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/angle_sdk.cpp:337:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&repscale[1],sizeof(double),atom->nangletypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDK::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:376:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:380:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lj_type[i][j],sizeof(int),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:381:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:382:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:383:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDK::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:413:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:414:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:415:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk.cpp:416:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDKCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:468:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:472:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lj_type[i][j],sizeof(int),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:473:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:474:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:475:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSDKCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:507:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:508:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:509:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:510:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:511:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:512:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_long.cpp:513:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK/pair_lj_sdk_coul_msm.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/colvarproxy_lammps.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/colvarproxy_lammps.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/colvarproxy_lammps.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp: In member function 'virtual void LAMMPS_NS::FixColvars::setup(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/fix_colvars.cpp:558:33: warning: unused variable 'id' [-Wunused-variable]
     std::vector<int>           &id = *(proxy->modify_atom_ids());
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp: In function 'void write_group(FILE*, int, LAMMPS_NS::Atom*, LAMMPS_NS::Group*, int, int, MPI_Comm, FILE*, FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp:131:25: warning: 'recvlist' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (num > 0) delete[] recvlist;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp: In member function 'void LAMMPS_NS::Group2Ndx::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/group_ndx.cpp:165:80: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
       write_group(fp,gid,atom,group,comm->me,comm->nprocs,world,screen,logfile);
                                                                                ^
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_saed.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_saed.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_saed.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_xrd.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_xrd.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/compute_xrd.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp: In member function 'void LAMMPS_NS::Ndx2Group::command(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS/ndx_group.cpp:127:37: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
         name = find_section(fp,NULL);
                                     ^
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION/fix_saed_vtk.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/atom_vec_dpd.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/compute_dpd.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_shardlow.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_shardlow.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_shardlow.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp: In member function 'void LAMMPS_NS::FixEOStable::read_table(LAMMPS_NS::FixEOStable::Table*, LAMMPS_NS::FixEOStable::Table*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:217:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:219:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:220:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:226:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:236:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table.cpp:238:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp: In member function 'void LAMMPS_NS::FixEOStableRX::read_table(LAMMPS_NS::FixEOStableRX::Table*, LAMMPS_NS::FixEOStableRX::Table*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:436:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:438:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:439:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:445:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:473:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_eos_table_rx.cpp:475:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/fix.h:17:0,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.h:23,
                 from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:14:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp: In member function 'virtual void LAMMPS_NS::FixRX::post_constructor()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/pointers.h:37:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define MAX(A,B) ((A) > (B) ? (A) : (B))
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:324:24: note: in expansion of macro 'MAX'
         tmpmaxstrlen = MAX(tmpmaxstrlen,strlen(word));
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp: In member function 'void LAMMPS_NS::FixRX::initSparse()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:549:59: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             if (sparseKinetics_inu[i][idx] >= nu_bin.size())
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:567:59: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
             if (sparseKinetics_inu[i][idx] >= nu_bin.size())
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/fix_rx.cpp:583:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i = 1; i < nu_bin.size(); ++i)
                                     ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nbin_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nbin_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nbin_ssa.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nstencil_half_bin_2d_newton_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nstencil_half_bin_2d_newton_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nstencil_half_bin_2d_newton_ssa.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonSSA::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:207:54: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                        tag[j]-tagprev);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:205:68: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                   which = find_special(onemols[imol]->special[iatom],
                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/npair_half_bin_newton_ssa.cpp:205:52: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                   which = find_special(onemols[imol]->special[iatom],
                                                    ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:316:7: warning: unused variable 'irequest' [-Wunused-variable]
   int irequest = neighbor->request(this,instance_me);
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:378:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:382:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:383:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:384:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdt::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:413:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&temperature,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:414:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:415:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt.cpp:416:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:409:7: warning: unused variable 'irequest' [-Wunused-variable]
   int irequest = neighbor->request(this,instance_me);
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:479:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:483:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:484:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:485:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&kappa[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:486:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp: In member function 'virtual void LAMMPS_NS::PairDPDfdtEnergy::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:516:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:517:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_dpd_fdt_energy.cpp:518:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'virtual void LAMMPS_NS::PairExp6rx::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:971:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:975:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'virtual void LAMMPS_NS::PairExp6rx::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1001:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1002:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1003:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1004:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'void LAMMPS_NS::PairMultiLucy::read_table(LAMMPS_NS::PairMultiLucy::Table*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:365:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:367:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:368:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:374:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:387:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:389:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucy::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:708:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:709:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp: In member function 'void LAMMPS_NS::PairExp6rx::getMixingWeights(int, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&) const':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1221:32: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1235:35: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1214:32: warning: 'nMolecules1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1228:35: warning: 'nMoleculesOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1221:5: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1235:5: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1214:5: warning: 'fraction1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_exp6_rx.cpp:1228:5: warning: 'fractionOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucy::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:177:24: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
         f[i][2] += delz*fpair;
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy.cpp:189:52: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (rho[i]*rho[i] < tb->innersq || rho[j]*rho[j] < tb->innersq)
                                                    ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/compute_temp_drude.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/compute_temp_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/compute_temp_drude.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'void LAMMPS_NS::PairMultiLucyRX::read_table(LAMMPS_NS::PairMultiLucyRX::Table*, char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:510:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:512:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:513:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:519:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:532:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:534:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'virtual void LAMMPS_NS::PairMultiLucyRX::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:853:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:854:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp: In member function 'void LAMMPS_NS::PairTableRX::getMixingWeights(int, double&, double&, double&, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:577:29: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2 = nMolecules2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:576:35: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2old = nMoleculesOld2;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:572:27: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2 = fraction2;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:571:33: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2old = fractionOld2;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:575:29: warning: 'nMolecules1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1 = nMolecules1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:574:35: warning: 'nMoleculesOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1old = nMoleculesOld1;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:570:27: warning: 'fraction1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1 = fraction1;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_table_rx.cpp:569:33: warning: 'fractionOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1old = fractionOld1;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'void LAMMPS_NS::PairMultiLucyRX::getMixingWeights(int, double&, double&, double&, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1015:29: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2 = nMolecules2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1014:35: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2old = nMoleculesOld2;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1010:27: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2 = fraction2;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1009:33: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite2old = fractionOld2;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1013:29: warning: 'nMolecules1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1 = nMolecules1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1012:35: warning: 'nMoleculesOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1old = nMoleculesOld1;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1008:27: warning: 'fraction1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1 = fraction1;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD/pair_multi_lucy_rx.cpp:1007:33: warning: 'fractionOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     mixWtSite1old = fractionOld1;
                                 ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_langevin_drude.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_langevin_drude.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_langevin_drude.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::init_style()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:360:7: warning: unused variable 'irequest' [-Wunused-variable]
   int irequest = neighbor->request(this,instance_me);
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:491:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:495:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:496:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:497:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&polar[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:498:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&thole[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:500:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:536:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:537:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:538:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&thole_global,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:539:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:540:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:541:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:542:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:543:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:544:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp: In member function 'int LAMMPS_NS::FixDrudeTransform<inverse>::pack_forward_comm(int, int*, double*, int, int*) [with bool inverse = false]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp:294:13: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
             buf[m++] = x[j][2] + dz;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp: In member function 'int LAMMPS_NS::FixDrudeTransform<inverse>::pack_forward_comm(int, int*, double*, int, int*) [with bool inverse = true]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/fix_drude_transform.cpp:294:13: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutTholeLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:668:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:661:78: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (drudetype[type[i]] != NOPOL_TYPE && drudetype[type[j]] != NOPOL_TYPE &&
                                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:663:27: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul += factor_e * dcoul;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:663:27: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:657:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:657:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:660:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:655:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/atom_vec_electron.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/atom_vec_electron.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/atom_vec_electron.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTholeLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:226:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:227:33: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:190:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:227:33: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:219:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:224:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:221:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:232:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:222:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = qi*qj * table;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:221:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_atom_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_atom_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_atom_eff.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_eff.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_eff.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_ke_eff.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp: In member function 'virtual void LAMMPS_NS::PairThole::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:314:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:318:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&polar[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:319:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&thole[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:320:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp: In member function 'virtual void LAMMPS_NS::PairThole::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:350:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&thole_global,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:351:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:352:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE/pair_thole.cpp:353:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_temp_deform_eff.cpp.o
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[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/compute_temp_eff.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/fix_adapt_fep.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/fix_adapt_fep.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/fix_adapt_fep.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp: In member function 'virtual void LAMMPS_NS::PairEffCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:968:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:971:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&cut[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp: In member function 'virtual void LAMMPS_NS::PairEffCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:995:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:996:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF/pair_eff_cut.cpp:997:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCutSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:275:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:279:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:280:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCutSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:309:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:310:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:312:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:313:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:314:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_cut_soft.cpp:362:80: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:297:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:301:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:328:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:329:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:331:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:332:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:333:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:839:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:843:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:844:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:845:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:846:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:847:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:882:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:883:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:884:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:886:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:887:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:888:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:889:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:890:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:372:82: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     prefactor = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_coul_long_soft.cpp:373:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:383:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:387:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:388:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:389:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:390:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:391:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:426:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:427:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:428:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:430:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:431:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:432:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:433:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:434:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:499:37: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:494:78: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e *lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:980:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (1.0/(denlj*denlj) - 1.0/denlj);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:972:81: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:973:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCutSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:142:80: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                                ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:526:71: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:547:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:548:66: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:547:58: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:547:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:186:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (1.0/(denlj*denlj) - 1.0/denlj);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:179:70: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:180:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:399:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:403:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:404:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:405:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:406:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:440:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:441:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:442:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:444:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:445:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:446:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:447:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:448:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:522:37: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:516:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:515:81: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:158:70: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:159:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2Soft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:322:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:326:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:327:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:328:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:329:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2Soft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:361:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:362:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:363:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:364:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:365:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_class2_soft.cpp:366:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:795:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:799:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:800:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:801:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:802:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:836:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:837:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:838:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:840:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:841:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:842:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:843:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:844:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:379:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:383:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:384:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:385:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:386:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:387:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:422:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:423:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:424:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphac,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:426:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:427:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:428:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:429:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:430:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:496:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:491:79: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCutSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:147:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:143:80: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:926:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:918:81: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
                                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:919:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:491:71: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:507:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:508:66: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:507:58: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:507:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:656:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:660:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:661:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:662:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:663:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:696:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nlambda,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:697:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alphalj,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:699:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:700:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:701:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:702:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:174:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:167:70: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:168:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:754:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:519:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:520:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:521:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:522:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:523:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:525:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:526:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:527:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:528:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:529:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_soft.cpp:411:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:391:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:390:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:318:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:314:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:315:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:319:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:320:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:321:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:322:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&lambda[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_morse_soft.cpp:323:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD/dump_h5md.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD/dump_h5md.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD/dump_h5md.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_manifoldforce.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_manifoldforce.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_manifoldforce.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLongSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:456:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:457:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:458:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:459:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:460:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:359:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:358:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:286:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP/pair_tip4p_long_soft.cpp:282:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_cylinder.cpp.o
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[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_cylinder_dent.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_thylakoid_shared.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_thylakoid_shared.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_torus.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_torus.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_torus.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_dens_final.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_dens_final.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_dens_final.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_thylakoid.cpp: In member function 'virtual void LAMMPS_NS::user_manifold::manifold_thylakoid::checkup()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_thylakoid.cpp:62:65: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'std::vector<LAMMPS_NS::user_manifold::thyla_part*>::size_type {aka unsigned int}' [-Wformat=]
     fprintf(screen,"I have %ld parts. They are:\n", parts.size());
                                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD/manifold_thylakoid.cpp:63:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for( int i = 0; i < parts.size(); ++i ){
                                    ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/pair_meamc.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/pair_meamc.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_linalg.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_linalg.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_linalg.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp: In member function 'void potdata::readpot(const char*, const char*, double)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:394:13: warning: variable 'dp' set but not used [-Wunused-but-set-variable]
    double f,dp;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:375:18: warning: variable 'alm' set but not used [-Wunused-but-set-variable]
  double alp = al,alm = al;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:158:19: warning: variable 'dr' set but not used [-Wunused-but-set-variable]
   double x0,x1,dx,dr;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:187:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:203:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:246:34: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,sizeof(line),in);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:306:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:329:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:331:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:334:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:343:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:345:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:358:34: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,sizeof(line),in);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp: In function 'void getparmindata(const char*, int*, double*, double*, double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:109:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,sizeof(line),in);
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:119:34: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,sizeof(line),in);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_readpot.cpp:123:34: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,sizeof(line),in);
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_setup_done.cpp: In member function 'double LAMMPS_NS::MEAM::phi_meam(double, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_setup_done.cpp:450:21: warning: 'rho0_2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rhobar2 = rho02 / rho_bkgd2 * G2;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/meam_setup_done.cpp:449:21: warning: 'rho0_1' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rhobar1 = rho01 / rho_bkgd1 * G1;
                     ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_splinetab.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_splinetab.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/mgpt_splinetab.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/pair_meamc.cpp: In member function 'void LAMMPS_NS::PairMEAMC::read_files(char*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC/pair_meamc.cpp:590:69: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
     meam_inst->meam_setup_param(which,value,nindex,index,&errorflag);
                                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineShift::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp:227:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
        fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp:228:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
        fread(&kcost[1],sizeof(double),atom->nangletypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp:229:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
        fread(&ksint[1],sizeof(double),atom->nangletypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift.cpp:230:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
        fread(&theta[1],sizeof(double),atom->nangletypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineShiftExp::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:259:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&umin[1],sizeof(double),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:260:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&a[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:261:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&cost[1],sizeof(double),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:262:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&sint[1],sizeof(double),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_cosine_shift_exp.cpp:263:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
          fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::compute_x(const int*, const int* const*, double*, double*, double*, double*, int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:593:24: warning: unused variable 'mx' [-Wunused-variable]
   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:593:27: warning: unused variable 'itag' [-Wunused-variable]
   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:593:32: warning: unused variable 'jtag' [-Wunused-variable]
   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:598:10: warning: unused variable 'nbc' [-Wunused-variable]
   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:598:20: warning: unused variable 'tbl' [-Wunused-variable]
   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:598:30: warning: unused variable 'tbm' [-Wunused-variable]
   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:599:13: warning: unused variable 'lmax_local' [-Wunused-variable]
   const int lmax_local = lmax;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:608:10: warning: variable 't0' set but not used [-Wunused-but-set-variable]
   double t0,t1;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:608:13: warning: variable 't1' set but not used [-Wunused-but-set-variable]
   double t0,t1;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:617:18: warning: unused variable 'tsort' [-Wunused-variable]
   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:617:42: warning: unused variable 'tlookup' [-Wunused-variable]
   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:619:10: warning: unused variable 'ntsort' [-Wunused-variable]
   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:619:36: warning: unused variable 'ntlookup' [-Wunused-variable]
   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'virtual void LAMMPS_NS::PairMGPT::coeff(int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:1837:9: warning: variable 'volpres_tag' set but not used [-Wunused-but-set-variable]
     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:1837:25: warning: variable 'precision_tag' set but not used [-Wunused-but-set-variable]
     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_5_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 64u))[1]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 64u))[1]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 64u))[1]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 64u))[1]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 128u))[2]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 128u))[2]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 128u))[2]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 128u))[2]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 192u))[3]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 192u))[3]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 192u))[3]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 192u))[3]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 256u))[4]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 256u))[4]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 256u))[4]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 256u))[4]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2148:35: warning: operation on '(*(M + 320u))[5]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2149:61: warning: operation on '(*(Mx + 320u))[5]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2150:61: warning: operation on '(*(My + 320u))[5]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2151:61: warning: operation on '(*(Mz + 320u))[5]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
   MAKE_ELEMENT_5(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_7_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 64u))[1]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 64u))[1]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 64u))[1]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 64u))[1]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(1,1);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 128u))[2]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 128u))[2]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 128u))[2]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 128u))[2]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(2,2);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 192u))[3]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 192u))[3]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 192u))[3]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 192u))[3]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(3,3);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 256u))[4]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 256u))[4]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 256u))[4]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(4,4);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 256u))[4]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(4,4);
   ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 320u))[5]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 320u))[5]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 320u))[5]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 320u))[5]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(5,5);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 384u))[6]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(6,6);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 384u))[6]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(6,6);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 384u))[6]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(6,6);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 384u))[6]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(6,6);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2167:35: warning: operation on '(*(M + 448u))[7]' may be undefined [-Wsequence-point]
     M [j][i] = M[i][j] =  fl  *tmp;                                  \
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(7,7);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2168:61: warning: operation on '(*(Mx + 448u))[7]' may be undefined [-Wsequence-point]
     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(7,7);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2169:61: warning: operation on '(*(My + 448u))[7]' may be undefined [-Wsequence-point]
     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(7,7);
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2170:61: warning: operation on '(*(Mz + 448u))[7]' may be undefined [-Wsequence-point]
     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
   MAKE_ELEMENT_7(7,7);
   ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp: In member function 'virtual void LAMMPS_NS::AngleDipole::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp:208:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_dipole.cpp:209:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gamma0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp: In member function 'virtual void LAMMPS_NS::AngleFourier::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp:234:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp:235:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C0[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp:236:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C1[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier.cpp:237:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp: In member function 'virtual void LAMMPS_NS::AngleFourierSimple::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp:240:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp:241:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_fourier_simple.cpp:242:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&N[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp: In member function 'virtual void LAMMPS_NS::AngleQuartic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp:235:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp:236:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp:237:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/angle_quartic.cpp:238:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonicShift::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp:179:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp:180:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift.cpp:181:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r1[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_ackland_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_ackland_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_ackland_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonicShiftCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:181:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:182:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/bond_harmonic_shift_cut.cpp:183:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r1[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_basal_atom.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_entropy_atom.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_stress_mop.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_stress_mop.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_pressure_grem.cpp: In member function 'virtual double LAMMPS_NS::ComputePressureGrem::compute_scalar()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_pressure_grem.cpp:93:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       scalar = (temperature->dof * boltz * t +
                                          ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_stress_mop_profile.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_temp_rotate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/compute_temp_rotate.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp: In member function 'virtual void LAMMPS_NS::DihedralCosineShiftExp::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:324:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&umin[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:325:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:326:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cost[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:327:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sint[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_cosine_shift_exp.cpp:328:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta[1],sizeof(double),atom->ndihedraltypes,fp);
                                                            ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp: At global scope:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT/pair_mgpt.cpp:575:13: warning: 'void tr_count(const double*, const double*, double*, const double*, double*, const double*, double*)' defined but not used [-Wunused-function]
 static void tr_count(const double * restrict A,
             ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp: In member function 'virtual void LAMMPS_NS::DihedralFourier::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp:367:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp:382:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(k[i],sizeof(double),nterms[i],fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp:383:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(multiplicity[i],sizeof(int),nterms[i],fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_fourier.cpp:384:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(shift[i],sizeof(double),nterms[i],fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralNHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp:321:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_nharmonic.cpp:331:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(a[i],sizeof(double),nterms[i],fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp: In member function 'virtual void LAMMPS_NS::DihedralQuadratic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp:328:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_quadratic.cpp:329:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi0[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp: In member function 'virtual void LAMMPS_NS::DihedralSpherical::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:758:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&nterms[1],sizeof(int),atom->ndihedraltypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:778:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(Ccoeff[i],sizeof(double),nterms[i],fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:779:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(phi_mult[i],sizeof(double),nterms[i],fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:780:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(phi_shift[i],sizeof(double),nterms[i],fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:781:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(phi_offset[i],sizeof(double),nterms[i],fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:782:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta1_mult[i],sizeof(double),nterms[i],fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:783:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta1_shift[i],sizeof(double),nterms[i],fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:784:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta1_offset[i],sizeof(double),nterms[i],fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:785:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta2_mult[i],sizeof(double),nterms[i],fp);
                                                        ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:786:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta2_shift[i],sizeof(double),nterms[i],fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_spherical.cpp:787:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(theta2_offset[i],sizeof(double),nterms[i],fp);
                                                          ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_addtorque.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_addtorque.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_addtorque.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp: In member function 'virtual void LAMMPS_NS::DihedralTable::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp:1045:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table.cpp:1046:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp: In member function 'virtual void LAMMPS_NS::DihedralTableCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp:1032:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/dihedral_table_cut.cpp:1033:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelateLong::end_of_step()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ave_correlate_long.cpp:507:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::read(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:2769:22: warning: variable 'edgeflag' set but not used [-Wunused-but-set-variable]
   int equivflag = 0, edgeflag = 0, bondflag = 0, customedgesflag = 0;
                      ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_electron_stopping.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_electron_stopping.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_electron_stopping.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ffl.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ffl.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ffl.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_filter_corotate.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_filter_corotate.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_filter_corotate.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::dedup_mega_gloves(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:1842:27: warning: 'dedup_size' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (int i = dedup_size-1; i > 0; --i) { //dedup_size
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::limit_bond(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:2003:79: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (stabilization_flag == 1) i_statted_tags[atom->map(temp_limit_glove[i])] = 0;
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:1980:15: warning: 'temp_limit_glove' may be used uninitialized in this function [-Wmaybe-uninitialized]
     delete [] temp_limit_glove;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp: In member function 'void LAMMPS_NS::FixBondReact::unlimit_bond()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_bond_react.cpp:2038:57: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (stabilization_flag == 1) i_statted_tags[i] = 1;
                                                         ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_flow_gauss.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_ees.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_ees.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_region_ees.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_region_ees.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_wall_region_ees.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp: In constructor 'LAMMPS_NS::FixTTMMod::FixTTMMod(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:120:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:121:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:125:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:126:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:130:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:131:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:135:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:136:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:145:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:146:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:150:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:151:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:155:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:156:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:160:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:161:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:165:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:166:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:170:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:171:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:175:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:176:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:180:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:181:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:185:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:186:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:190:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:191:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:195:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:196:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:200:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:201:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:205:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:206:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:210:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:211:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:215:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:216:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:220:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:221:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:225:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/fix_ttm_mod.cpp:226:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(linee,MAXLINE,fpr_2);
                             ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp: In member function 'virtual void LAMMPS_NS::ImproperCossq::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp:304:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_cossq.cpp:305:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp: In member function 'virtual void LAMMPS_NS::ImproperDistance::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp:250:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_distance.cpp:251:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp: In member function 'virtual void LAMMPS_NS::ImproperFourier::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:328:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:329:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:330:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C1[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:331:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C2[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_fourier.cpp:332:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&all[1],sizeof(int),atom->nimpropertypes,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp: In member function 'virtual void LAMMPS_NS::ImproperRing::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp:328:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/improper_ring.cpp:329:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairBuckMDF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:305:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:309:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:310:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:311:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:312:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairBuckMDF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:341:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:342:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:343:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_buck_mdf.cpp:344:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp: In member function 'virtual void LAMMPS_NS::PairAGNI::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:220:78: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (evflag) ev_tally_xyz_full(i,0.0,0.0,fxtmp,fytmp,fztmp,delx,dely,delz);
                                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:220:78: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:220:78: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp: In member function 'void LAMMPS_NS::PairAGNI::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:460:70: warning: 'wantdata' may be used uninitialized in this function [-Wmaybe-uninitialized]
     } else if (params && (wantdata >=0) && (nwords == params[wantdata].numeta+3)) {
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_agni.cpp:430:26: warning: 'curparam' may be used uninitialized in this function [-Wmaybe-uninitialized]
     } else if ((curparam >=0) && (nwords == 1) && (strcmp(words[0],"endVar") == 0)) {
                          ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_drip.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_drip.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_drip.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDiel::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:285:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rme[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:286:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigmae[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:287:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDiel::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:314:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:315:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_diel.cpp:316:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp: In member function 'virtual void LAMMPS_NS::PairCoulShield::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:301:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigmae[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:302:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp: In member function 'virtual void LAMMPS_NS::PairCoulShield::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:328:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:329:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_coul_shield.cpp:330:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip_multi.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip_multi.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_edip_multi.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp: In member function 'void LAMMPS_NS::PairE3B::presetParam(int, bool&, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp:617:17: warning: 'lconv' may be used uninitialized in this function [-Wmaybe-uninitialized]
   bondL *= lconv*BOND_DELTA;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_e3b.cpp:611:14: warning: 'econv' may be used uninitialized in this function [-Wmaybe-uninitialized]
   e2 *= econv;
              ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_extep.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_extep.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_extep.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp: In member function 'virtual void LAMMPS_NS::PairGaussCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:303:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:307:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&hgauss[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:308:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rmh[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:309:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigmah[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:310:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp: In member function 'virtual void LAMMPS_NS::PairGaussCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:339:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:340:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_gauss_cut.cpp:341:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp: In member function 'void LAMMPS_NS::PairILPGrapheneHBN::calc_FvdW(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:451:39: warning: unused variable 'k' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:451:41: warning: unused variable 'l' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:451:43: warning: unused variable 'kk' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:451:46: warning: unused variable 'll' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp: In member function 'void LAMMPS_NS::PairILPGrapheneHBN::calc_FRep(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:552:38: warning: unused variable 'r2inv' [-Wunused-variable]
   double rsq,r,Rcut,rhosq1,exp0,exp1,r2inv,r6inv,r8inv,Tap,dTap,Vilp;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:552:44: warning: unused variable 'r6inv' [-Wunused-variable]
   double rsq,r,Rcut,rhosq1,exp0,exp1,r2inv,r6inv,r8inv,Tap,dTap,Vilp;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:552:50: warning: unused variable 'r8inv' [-Wunused-variable]
   double rsq,r,Rcut,rhosq1,exp0,exp1,r2inv,r6inv,r8inv,Tap,dTap,Vilp;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:553:16: warning: unused variable 'TSvdw' [-Wunused-variable]
   double frho1,TSvdw,TSvdw2inv,Erep,fsum,rdsq1;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:553:22: warning: unused variable 'TSvdw2inv' [-Wunused-variable]
   double frho1,TSvdw,TSvdw2inv,Erep,fsum,rdsq1;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_ilp_graphene_hbn.cpp:555:22: warning: unused variable 'ILP_neighs_j' [-Wunused-variable]
   int *ILP_neighs_i,*ILP_neighs_j;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp: In member function 'void LAMMPS_NS::PairKolmogorovCrespiFull::calc_FvdW(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:453:39: warning: unused variable 'k' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:453:41: warning: unused variable 'l' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:453:43: warning: unused variable 'kk' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:453:46: warning: unused variable 'll' [-Wunused-variable]
   int i,j,ii,jj,inum,jnum,itype,jtype,k,l,kk,ll;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp: In member function 'void LAMMPS_NS::PairKolmogorovCrespiFull::calc_FRep(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:552:45: warning: variable 'r8inv' set but not used [-Wunused-but-set-variable]
   double rsq,r,rhosq1,exp0,exp1,r2inv,r6inv,r8inv,Tap,dTap,Vkc;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_full.cpp:555:21: warning: unused variable 'KC_neighs_j' [-Wunused-variable]
   int *KC_neighs_i,*KC_neighs_j;
                     ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_kolmogorov_crespi_z.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lebedeva_z.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lebedeva_z.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lebedeva_z.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_list.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_list.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_list.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJ_AB_MDF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:305:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:309:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&aparm[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:310:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bparm[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:311:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:312:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJ_AB_MDF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lennard_mdf.cpp:339:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:831:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:835:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:836:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:837:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shift[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:838:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:870:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:871:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:872:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:873:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:874:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:875:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:876:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJExpandCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:967:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:959:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:959:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:962:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:957:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:553:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:529:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:553:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:553:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:559:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:556:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJMDF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:313:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:317:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:318:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:319:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:320:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp: In member function 'virtual void LAMMPS_NS::PairLJMDF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_mdf.cpp:347:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpandCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:186:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:191:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:195:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:188:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_expand_coul_long.cpp:188:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:489:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:493:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:494:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:495:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:496:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:497:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&scale[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:526:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:527:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:528:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSpline::read_file(const char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:442:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:448:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:478:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSpline::SplineFunction::parse(FILE*, LAMMPS_NS::Error*, bool)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:642:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:645:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:651:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:658:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_spline.cpp:662:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual void LAMMPS_NS::PairLJSFDipoleSF::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:280:25: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:279:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               rsq*rcutlj2inv+
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:272:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:270:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:29: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:272:45: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:270:46: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:37: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:268:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:272:29: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:277:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'virtual double LAMMPS_NS::PairLJSFDipoleSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:625:17: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:624:10: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       rsq*rcutlj2inv+
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:622:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:617:29: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += qtmp * r3inv * qpfac * pjdotr;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:615:30: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += -q[j] * r3inv * pqfac * pidotr;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:617:21: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += qtmp * r3inv * qpfac * pjdotr;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:617:37: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += qtmp * r3inv * qpfac * pjdotr;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:615:38: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += -q[j] * r3inv * pqfac * pidotr;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:613:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSWSpline::read_file(const char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:471:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp: In member function 'void LAMMPS_NS::PairMEAMSWSpline::SplineFunction::parse(FILE*, LAMMPS_NS::Error*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:603:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(line, MAXLINE, fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:609:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(line, MAXLINE, fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:615:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(line, MAXLINE, fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_meam_sw_spline.cpp:619:41: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(line, MAXLINE, fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp: In member function 'virtual void LAMMPS_NS::PairMomb::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:310:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:314:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:315:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:316:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:317:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:318:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rr[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:319:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp: In member function 'virtual void LAMMPS_NS::PairMomb::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:351:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:352:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sscale,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:353:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&dscale,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:354:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_momb.cpp:355:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_tersoff_table.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_tersoff_table.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_tersoff_table.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSmoothLinear::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:276:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:280:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:281:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:282:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:283:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairMorseSmoothLinear::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:310:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_morse_smooth_linear.cpp:311:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/temper_grem.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/temper_grem.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/temper_grem.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp: In member function 'virtual void LAMMPS_NS::PairSRP::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:701:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:706:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:707:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp: In member function 'virtual void LAMMPS_NS::PairSRP::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:735:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:736:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bptype,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:737:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&btype,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:738:33: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&min,sizeof(int),1,fp);
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:739:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&midpoint,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/pair_srp.cpp:740:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&exclude,sizeof(int),1,fp);
                                     ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/temper_npt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/temper_npt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC/temper_npt.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2P6::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:388:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:389:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:390:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:391:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:392:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k5[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:393:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k6[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:395:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_k[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:396:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:397:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:399:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:400:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:401:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_class2_p6.cpp:402:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineBuck6d::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:334:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:335:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:336:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&th0[1],sizeof(double),atom->nangletypes,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineBuck6d::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:178:47: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
         evdwl = ebuck6d - offset[itype][jtype];
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/angle_cosine_buck6d.cpp:163:33: warning: 'r32inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     fpair = forcebuck6d * r32inv;
                                 ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperInversionHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp:315:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kw[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/improper_inversion_harmonic.cpp:316:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&w0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/dynamical_matrix.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/dynamical_matrix.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/dynamical_matrix.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:417:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:421:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:422:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d2[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:423:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d3[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:424:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:425:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha_ij[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:426:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:459:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&vdwl_smooth,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:460:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:461:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:462:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:463:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:464:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussDSF::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:191:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:193:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:186:51: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = ebuck6d - offset[itype][jtype];
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBuck6dCoulGaussDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:556:63: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  rsq*f_shift_ij[itype][jtype]);
                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:555:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:550:47: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck6d = ebuck6d - offset[itype][jtype];
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:449:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:453:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d1[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:454:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d2[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:455:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d3[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:456:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck6d4[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:457:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha_ij[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:458:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:492:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&vdwl_smooth,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:493:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&coul_smooth,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:494:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:495:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:496:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:497:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:498:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuck6dCoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:611:71: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:611:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:611:66: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:605:47: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck6d = ebuck6d - offset[itype][jtype];
                                               ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuck6dCoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:210:72: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:210:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:210:77: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
                                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:204:51: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = ebuck6d - offset[itype][jtype];
                                                   ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_alloy_types.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_alloy_types.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_alloy_types.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_canonical_coloured.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_canonical_coloured.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_canonical_coloured.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp: In member function 'void LAMMPS_NS::FixPhonon::GaussJordan(int, std::complex<double>*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp:787:14: warning: 'irow' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,icol,irow,j,k,l,ll,idr,idc;
              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON/fix_phonon.cpp:826:22: warning: 'icol' may be used uninitialized in this function [-Wmaybe-uninitialized]
     idr = icol*n+icol;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp: In function 'int get_neighbours(void*, size_t, size_t, int, size_t*, int32_t*, double (*)[3])':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp:189:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   if (atom_index < data->nlocal) {
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/compute_ptm_atom.cpp:203:14: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (j == atom_index)
              ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_convex_hull_incremental.cpp.o
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[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM/ptm_deformation_gradient.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/fix_qeq_reax.cpp: In member function 'virtual void LAMMPS_NS::FixQEqReax::pre_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/fix_qeq_reax.cpp:514:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     qeq_time = t_end - t_start;
                      ^
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[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_bonds.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/pair_reaxc.cpp: In member function 'virtual void LAMMPS_NS::PairReaxC::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/pair_reaxc.cpp:547:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     data->timing.nbrs = t_end - t_start;
                               ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_forces.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_forces.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_forces.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_control.cpp: In function 'char Read_Control_File(char*, control_params*, output_controls*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_control.cpp:121:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_hydrogen_bonds.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp: In function 'char Read_Force_Field(FILE*, reax_interaction*, control_params*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:58:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:61:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:80:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAX_LINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:92:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:97:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:98:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:99:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:152:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:178:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:197:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:216:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:236:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( s, MAX_LINE, fp );
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:321:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:331:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:335:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAX_LINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:362:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAX_LINE,fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:483:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(s,MAX_LINE,fp);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:488:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAX_LINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:544:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:549:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAX_LINE,fp);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:602:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:607:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:673:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( s, MAX_LINE, fp );
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_ffield.cpp:683:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( s, MAX_LINE, fp );
                             ^
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_init_md.cpp.o
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[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_io_tools.cpp.o
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[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_list.cpp.o
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[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_multi_body.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_multi_body.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_multi_body.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_nonbonded.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_nonbonded.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_nonbonded.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Tridiagonal_Solve(const double*, const double*, double*, double*, double*, unsigned int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:41:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for(i = 1; i < n; i++){
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Natural_Cubic_Spline(LAMMPS_NS::Error*, const double*, const double*, cubic_spline_coef*, unsigned int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:68:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 2; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:72:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:76:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n-2; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:80:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:87:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n; ++i ){
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp: In function 'void Complete_Cubic_Spline(LAMMPS_NS::Error*, const double*, const double*, double, double, cubic_spline_coef*, unsigned int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:118:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n; ++i )
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:122:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n; ++i )
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:126:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 0; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:131:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n-1; ++i )
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_lookup.cpp:136:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for( i = 1; i < n; ++i ){
                   ^
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_reset_tools.cpp.o
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[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_traj.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_traj.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_traj.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp: In function 'void* smalloc(LAMMPS_NS::Error*, rc_bigint, const char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:83:41: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
               "returning NULL.", n, name);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:83:41: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:90:79: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
     snprintf(errmsg, 256, "Failed to allocate %ld bytes for array %s", n, name);
                                                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:90:79: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp: In function 'void* scalloc(LAMMPS_NS::Error*, rc_bigint, rc_bigint, const char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:106:42: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
             "returning NULL.\n", n, name );
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:106:42: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:113:43: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'rc_bigint {aka long long int}' [-Wformat=]
              "returning NULL", name, size );
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:113:43: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'rc_bigint {aka long long int}' [-Wformat=]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:121:84: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
     snprintf(errmsg, 256, "Failed to allocate %ld bytes for array %s", n*size, name);
                                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_tool_box.cpp:121:84: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_valence_angles.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_valence_angles.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_valence_angles.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_vector.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_vector.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_vector.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_traj.cpp: In function 'int Write_Header(reax_system*, control_params*, output_controls*, mpi_datatypes*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC/reaxc_traj.cpp:107:79: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'rc_bigint {aka long long int}' [-Wformat=]
     sprintf( out_control->line, BIGINT_LINE, "number_of_atoms:", system->bigN );
                                                                               ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp: In member function 'virtual void LAMMPS_NS::FixMesoMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp:708:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp:677:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp:646:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'void LAMMPS_NS::FixRigidMeso::set_xv()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:330:50: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:329:60: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:329:50: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'virtual void LAMMPS_NS::PairSMTBQ::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:434:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(ptr,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:437:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(ptr,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:488:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:492:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:500:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:509:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:527:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:541:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:564:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:567:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:620:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:632:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:654:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:667:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:674:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets( ptr, MAXLINE, fp);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:694:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(ptr,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:697:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets( ptr, MAXLINE, fp);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:707:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:718:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:721:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:726:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:734:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:737:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:744:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:747:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:757:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:760:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:765:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:791:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:794:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:802:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:812:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets( ptr, MAXLINE, fp);
                           ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/atom_vec_meso.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/atom_vec_meso.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/atom_vec_meso.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'void LAMMPS_NS::FixRigidMeso::set_v()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:450:40: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x1 = x[i][1] + ybox*yprd + zbox*yz;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:449:50: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_rigid_meso.cpp:449:40: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp: In constructor 'LAMMPS_NS::FixMesoMove::FixMesoMove(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD/fix_meso_move.cpp:173:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"units") == 0) {
                        ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_e_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_e_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_e_atom.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_rho_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_rho_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_rho_atom.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_t_atom.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_t_atom.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/compute_meso_t_atom.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/fix_meso.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/fix_meso.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/fix_meso.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:693:3: warning: 'test' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (test == 0) {
   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'void LAMMPS_NS::PairSMTBQ::tabqeq()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:1457:70: warning: 'bCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (r > rc) {dij = aCoeff *square(r- rc-nang) *exp(bCoeff*r);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:1457:37: warning: 'aCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (r > rc) {dij = aCoeff *square(r- rc-nang) *exp(bCoeff*r);
                                     ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/fix_meso_stationary.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_rhosum.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_rhosum.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_rhosum.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_taitwater.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_taitwater.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_taitwater.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'void LAMMPS_NS::PairSMTBQ::Charge()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:2593:61: warning: 'gp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     QOxInit=max(QOxInit, -0.98* params[1].qform *nQEqcall[gp]/nQEqaall[gp])   ;
                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ/pair_smtbq.cpp:2812:24: warning: 't_init' may be used uninitialized in this function [-Wmaybe-uninitialized]
     dt = t_end - t_init;
                        ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH/pair_sph_taitwater_morris.cpp.o
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[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY/compute_force_tally.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/compute_temp_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/compute_temp_uef.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/dump_cfg_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/dump_cfg_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/dump_cfg_uef.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/fix_nh_uef.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/fix_nh_uef.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/fix_nh_uef.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/compute_pressure_uef.cpp: In member function 'virtual void LAMMPS_NS::ComputePressureUef::compute_vector()':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF/compute_pressure_uef.cpp:143:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
                               ^
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp: In member function 'virtual void LAMMPS_NS::AngleCross::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:281:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kss[1],sizeof(double),atom->nangletypes,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:282:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kbs0[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:283:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kbs1[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:284:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r00[1],sizeof(double),atom->nangletypes,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:285:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r01[1],sizeof(double),atom->nangletypes,fp);
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_cross.cpp:286:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp: In member function 'virtual void LAMMPS_NS::AngleMM3::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp:228:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/angle_mm3.cpp:229:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp: In member function 'virtual void LAMMPS_NS::BondMM3::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp:181:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/bond_mm3.cpp:182:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp: In member function 'virtual void LAMMPS_NS::ImproperDistHarm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp:259:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_distharm.cpp:260:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_data.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_data.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_data.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp: In member function 'virtual void LAMMPS_NS::ImproperSQDistHarm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp:259:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/improper_sqdistharm.cpp:260:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:523:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:527:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:528:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:529:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:530:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:563:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:564:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:565:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&truncw,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:566:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:567:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:568:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:569:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:570:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:523:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:527:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:528:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:529:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:530:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:563:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:564:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:565:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&truncw,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:566:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:567:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:568:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:569:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:570:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJSwitch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:658:19: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
     forcelj = expb*lj1[itype][jtype]*r-6.0*lj4[itype][jtype]*r6inv;
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:692:36: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:675:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:666:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:666:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:669:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:664:32: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc1;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:682:7: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (r>cut_lj[itype][jtype]-truncw) {
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJSwitch3CoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:193:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ecoul += prefactor2*erfc2*factor_coul;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:184:36: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc1;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:193:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ecoul += prefactor2*erfc2*factor_coul;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:189:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:211:41: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:194:24: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
           evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:201:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (r>cut_lj[itype][jtype]-truncw) {
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:186:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:186:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/thr_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual double LAMMPS_NS::PairMM3Switch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:677:17: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:693:36: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:677:35: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:668:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:668:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:671:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:666:32: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc1;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:683:7: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (r>cut_lj[itype][jtype]-truncw) {
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'virtual void LAMMPS_NS::PairMM3Switch3CoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:197:23: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:196:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ecoul += prefactor2*erfc2*factor_coul;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:187:36: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc1;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:196:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           ecoul += prefactor2*erfc2*factor_coul;
                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:192:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:213:41: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:197:41: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:203:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (r>cut_lj[itype][jtype]-truncw) {
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:189:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:189:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_omp.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_omp.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_gromos_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_gromos_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_gromos_omp.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_omp.cpp: In member function 'void LAMMPS_NS::BondFENEOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_omp.cpp:140:9: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_omp.cpp: In member function 'void LAMMPS_NS::BondFENEOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_omp.cpp:140:9: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'void LAMMPS_NS::BondFENEExpandOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_expand_omp.cpp:144:9: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'void LAMMPS_NS::BondFENEExpandOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_fene_expand_omp.cpp:144:9: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_morse_omp.cpp.o
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[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp: In member function 'void LAMMPS_NS::BondQuarticOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp:152:26: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (rsq < TWO_1_3) ebond += 4.0*sr6*(sr6-1.0) + 1.0;
                          ^
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_harmonic_shift_cut_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp: In member function 'void LAMMPS_NS::BondQuarticOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/bond_quartic_omp.cpp:152:26: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/dihedral_class2_omp.cpp.o
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[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_gravity_omp.cpp.o
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[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nvt_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nvt_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nvt_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:498:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:493:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:477:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:498:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:493:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:477:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:498:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:493:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:477:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:498:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:493:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:477:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_class2_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:675:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:662:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:675:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:662:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp: In member function 'void LAMMPS_NS::FixRigidOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:675:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_omp.cpp:662:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp: In member function 'virtual void LAMMPS_NS::FixQEqReaxOMP::pre_force(int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_qeq_reax_omp.cpp:347:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     qeq_time = t_end - t_start;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:437:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:432:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:417:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:437:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:432:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:417:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:437:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:432:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:417:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:437:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:432:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:417:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       pd = -pd;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:235:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
       p = 2.0 - p;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:611:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:598:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_harmonic_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_harmonic_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       pd = -pd;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:235:7: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
       p = 2.0 - p;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:611:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:598:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'void LAMMPS_NS::FixRigidSmallOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:611:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_small_omp.cpp:598:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       pd = -pd;
       ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_umbrella_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_umbrella_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_umbrella_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp: In member function 'void LAMMPS_NS::ImproperCvffOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_BOND = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cvff_omp.cpp:236:7: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cossq_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cossq_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_cossq_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/improper_fourier_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pppm_disp_tip4p_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pppm_disp_tip4p_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pppm_disp_tip4p_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pppm_tip4p_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pppm_tip4p_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pppm_tip4p_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:112:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:48:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:110:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:47:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:110:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_omp.cpp:47:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:118:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:116:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:49:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:116:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_bin_ghost_omp.cpp:49:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:120:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:49:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:118:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:48:46: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:118:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_multi_omp.cpp:48:41: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:112:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:110:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:49:36: note: 'iatom' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:110:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_omp.cpp:49:31: note: 'imol' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                               ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:112:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:110:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:49:36: note: 'iatom' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:110:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:49:31: note: 'imol' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                               ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:117:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:115:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:49:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:115:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:49:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:126:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:124:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:53:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:124:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:53:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:118:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:49:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:147:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:48:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:147:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_omp.cpp:48:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:123:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:121:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:48:43: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:121:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:48:38: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
                                      ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:124:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:122:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:50:46: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:122:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:50:41: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                         ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:120:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:155:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:49:46: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:155:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_omp.cpp:49:41: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:133:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:131:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:50:46: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:131:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:50:41: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
                                         ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:113:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:111:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:51:36: note: 'iatom' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:111:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:51:31: note: 'imol' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                               ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:121:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:119:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:54:36: note: 'iatom' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:119:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:54:31: note: 'imol' was declared here
   int i,j,n,itype,jtype,which,imol,iatom;
                               ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:131:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:129:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:50:46: note: 'iatom' was declared here
   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:129:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_nsq_newton_omp.cpp:50:41: note: 'imol' was declared here
   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:148:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:146:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:54:54: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:146:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:54:49: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:165:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (which == 0) neighptr_middle[n_middle++] = j;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:54:40: note: 'n_middle' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:190:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:57:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:94:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:81:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:81:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:81:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:150:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:192:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:53:54: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:192:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:53:49: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:166:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (which == 0) neighptr_middle[n_middle++] = j;
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:53:40: note: 'n_middle' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:236:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:56:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:93:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:80:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:80:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:80:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:155:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:153:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:53:54: note: 'iatom' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:153:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:53:49: note: 'imol' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:172:55: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (which == 0) neighptr_middle[n_middle++] = j;
                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:53:40: note: 'n_middle' was declared here
   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:197:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:56:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:21:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:93:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:80:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:80:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:80:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:145:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:143:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:55:47: note: 'iatom' was declared here
   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:143:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:55:42: note: 'imol' was declared here
   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:160:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (which == 0) neighptr_middle[n_middle++] = j;
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:55:33: note: 'n_middle' was declared here
   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:184:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:58:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:22:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:97:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:84:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:84:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:84:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newton_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp: In function '<built-in>':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:163:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:10: note: 'tagprev' was declared here
   tagint tagprev;
          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:161:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:56:57: note: 'iatom' was declared here
   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
                                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:161:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:56:52: note: 'imol' was declared here
   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:179:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (which == 0) neighptr_middle[n_middle++] = j;
                                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:56:43: note: 'n_middle' was declared here
   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:203:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:59:34: note: 'neighptr_middle' was declared here
   int *neighptr,*neighptr_inner,*neighptr_middle;
                                  ^
In file included from /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:22:0:
/builddir/build/BUILD/lammps-stable_7Aug2019/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:98:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:85:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:85:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:85:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
        ^
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:177:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
             ^
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:177:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_wolf_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
             ^
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_debye_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_debye_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_dsf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_dsf_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_cut_omp.cpp:155:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_wolf_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp:147:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = epsilon[itype][jtype]*
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp:145:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'void LAMMPS_NS::PairLJCubicOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp:147:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = epsilon[itype][jtype]*
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cubic_omp.cpp:145:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:154:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:157:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:154:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_expand_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_expand_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_expand_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:160:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:157:13: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:160:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:13: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:174:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:13: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:181:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:174:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:180:13: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:180:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulWolfOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:180:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_linear_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp:146:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_omp.cpp:146:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'void LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:13: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'void LAMMPS_NS::PairLJSmoothOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:13: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:150:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_smooth_omp.cpp:147:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
             ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_soft_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_ufm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_ufm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_ufm_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a * tb->e[itable] + b * tb->e[itable+1] +
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:185:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp: In member function 'void LAMMPS_NS::PairTableOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a * tb->e[itable] + b * tb->e[itable+1] +
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:187:13: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_table_omp.cpp:185:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
             ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gayberne_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gayberne_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gayberne_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_resquared_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_resquared_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_resquared_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp:146:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp: In member function 'void LAMMPS_NS::PairZBLOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_zbl_omp.cpp:146:13: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:159:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_poly_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_brownian_poly_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:170:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:171:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:170:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:171:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:175:13: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:211:19: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (EVFLAG) ev_tally_thr(this, i,j,nlocal,NEWTON_PAIR,
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:204:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       fztmp += delz*fpair;
       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:211:19: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (EVFLAG) ev_tally_thr(this, i,j,nlocal,NEWTON_PAIR,
                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:204:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       fztmp += delz*fpair;
       ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_poly_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lubricate_poly_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_yukawa_colloid_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:204:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp: In member function 'void LAMMPS_NS::PairColloidOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_colloid_omp.cpp:204:7: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hertz_history_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:259:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:250:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:259:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hooke_omp.cpp.o
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[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o
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[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_long_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBornCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:169:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:170:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_long_omp.cpp:173:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_long_coul_long_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairBuckCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:165:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:164:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:13: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:179:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:176:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:179:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:176:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_omp.cpp:176:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:174:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:174:34: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:169:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_msm_omp.cpp:171:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                    ^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:186:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:191:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:195:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:186:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:191:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:195:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_coul_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:181:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:190:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:181:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:190:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:183:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:454:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:466:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:461:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:466:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:463:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:454:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:454:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:454:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:469:23: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:440:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:436:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:383:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:379:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:443:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:438:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:443:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:440:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:432:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:431:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:415:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:411:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:356:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_omp.cpp:352:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_adp_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_adp_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_adp_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_inner(int, int, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1335:28: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1331:28: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1304:28: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1300:28: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_middle(int, int, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1597:28: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1593:28: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1566:28: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1562:28: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::TORSION_thr(int, int, int, int, double*, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:999:77: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ev_tally4_thr(this,i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl,thr);
                                                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp: In member function 'void LAMMPS_NS::PairAIREBOOMP::FLJ_thr(int, int, int, int, int, double*, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:569:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair = dC*dwij / rij;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:613:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:608:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:608:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:613:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:584:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:580:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkjS / rikS;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:603:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:608:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:613:45: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:608:45: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:584:40: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:603:45: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:639:84: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
             v_tally4_thr(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS,thr);
                                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_omp.cpp:639:84: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_airebo_morse_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_comb_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_comb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_comb_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyOMP::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:187:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_alloy_omp.cpp:200:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSOMP::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:139:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:167:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:189:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_fs_omp.cpp:205:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair += D_i * rhojp * t1;
           ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eim_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eim_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eim_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_rebo_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_rebo_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_rebo_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_sw_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_sw_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_sw_omp.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1073:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1078:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp: In member function 'void LAMMPS_NS::PairEAMCDOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CDEAMVERSION = 2]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_eam_cd_omp.cpp:481:11: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1067:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1066:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1030:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1010:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_mod_c_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1052:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1048:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:995:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:991:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o
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[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingLJOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:180:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp: In member function 'void LAMMPS_NS::PairHbondDreidingMorseOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp:193:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_lps_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_lps_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_lps_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:420:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:391:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:420:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:391:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:420:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:391:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:420:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:391:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:404:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:400:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:345:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:341:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PCutOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:375:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:371:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:316:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_cut_omp.cpp:312:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_pmb_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_pmb_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_peri_pmb_omp.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_cut_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (drudetype[type[i]] != NOPOL_TYPE &&
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:15: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:15: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = qi*qj * table;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:15: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:241:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:252:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:241:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_long_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (drudetype[type[i]] != NOPOL_TYPE &&
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:15: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:15: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = qi*qj * table;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:15: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += factor_e * dcoul;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:239:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:241:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:252:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:241:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j != di_closest){
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j != di_closest){
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j != di_closest){
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTholeLongOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:203:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j != di_closest){
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:210:15: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
               dcoul = qqrd2e * dqi * dqj / r;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:157:13: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = lj1[itype][jtype] * 4.0 * epsilon[itype][jtype] *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:154:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:157:13: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = lj1[itype][jtype] * 4.0 * epsilon[itype][jtype] *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:154:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:179:13: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = lj1[itype][jtype] * 4.0 * epsilon[itype][jtype] *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:173:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_soft_omp.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:179:13: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = lj1[itype][jtype] * 4.0 * epsilon[itype][jtype] *
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:173:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:174:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:435:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:435:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:435:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:406:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:435:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:406:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:419:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:415:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:360:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:356:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:406:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp: In member function 'void LAMMPS_NS::PairAGNIOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp:159:17: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (EVFLAG) ev_tally_xyz_full_thr(this,i,0.0,0.0,
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp:159:17: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_agni_omp.cpp:159:17: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:406:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_diel_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_diel_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_coul_diel_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_edip_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_edip_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_edip_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'void LAMMPS_NS::PairTIP4PLongSoftOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:390:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:386:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:331:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:327:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gauss_cut_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gauss_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_gauss_cut_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_meam_spline_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_meam_spline_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_meam_spline_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_morse_smooth_linear_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFOMP::eval(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:15: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j] * r3inv * pqfac * pidotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:277:15: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:15: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp * r3inv * qpfac * pjdotr;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:286:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_table_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_table_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_tersoff_table_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_asphere_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_asphere_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_nh_asphere_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp: In member function 'virtual void LAMMPS_NS::PairReaxCOMP::compute(int, int)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_reaxc_omp.cpp:223:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     data->timing.nbrs = t_end - t_start;
                               ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bond_orders_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bond_orders_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bond_orders_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 0; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_nonbonded_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_nonbonded_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_nonbonded_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:780:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:775:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:759:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bonds_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bonds_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_bonds_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:780:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:775:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:759:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:780:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:775:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:759:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_xv_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:780:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:775:31: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:759:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:957:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:944:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:957:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:944:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'void LAMMPS_NS::FixRigidNHOMP::set_v_thr() [with int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:957:21: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/fix_rigid_nh_omp.cpp:944:15: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
               ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_torsion_angles_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_forces_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_forces_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_forces_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 0; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp: In function 'int Init_ListsOMP(reax_system*, control_params*, simulation_data*, storage*, reax_list**, mpi_datatypes*, char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_init_md_omp.cpp:54:12: warning: variable 'comm' set but not used [-Wunused-but-set-variable]
   MPI_Comm comm;
            ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_multi_body_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_multi_body_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_multi_body_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_valence_angles_omp.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_valence_angles_omp.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/reaxc_valence_angles_omp.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_opt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 1; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2029:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2028:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1979:34: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (EVFLAG && vflag) key += 2;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1959:26: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = iH2;
                          ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_morse_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_morse_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_morse_opt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 1; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'void LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer(int, int, LAMMPS_NS::ThrData*) [with int EVFLAG = 0; int EFLAG = 0; int NEWTON_PAIR = 0; int CTABLE = 1; int LJTABLE = 1; int ORDER1 = 1; int ORDER6 = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2001:13: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1997:13: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1931:13: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2].x += fHx;
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1927:13: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1].x += fHx;
             ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_ufm_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_ufm_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_ufm_opt.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 ecoul = prefactor*erfc;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = etable[itable] + fraction*detable[itable];
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 ecoul = prefactor*erfc;
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:17: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:17: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = etable[itable] + fraction*detable[itable];
                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:40: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = etable[itable] + fraction*detable[itable];
                                        ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 1; int CTABLE = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongOpt::eval() [with int EVFLAG = 1; int EFLAG = 1; int NEWTON_PAIR = 0; int CTABLE = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:13: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_long_coul_long_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_long_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_long_coul_long_opt.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_opt.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:437:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 1; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:38: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:437:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:15: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 1]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 1; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH2;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               vlist[n++] = jH1;
               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'void LAMMPS_NS::PairLJCutTIP4PLongOpt::eval() [with int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0; int <anonymous> = 0]':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:23: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:23: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:23: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fHx;
                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:23: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fHx;
                       ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_alloy_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_alloy_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_alloy_opt.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_fs_opt.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_fs_opt.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT/pair_eam_fs_opt.cpp
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[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pppm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pppm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pppm_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_beck_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_beck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_beck_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_gpu.cpp.o
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/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_beck_gpu.cpp: In member function 'void LAMMPS_NS::PairBeckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_beck_gpu.cpp:240:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_gpu.cpp: In member function 'void LAMMPS_NS::PairBornGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_gpu.cpp:242:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp:281:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp:278:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp:278:72: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_gpu.cpp:282:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_gpu.cpp:237:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp:249:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_cut_gpu.cpp:249:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_debye_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_debye_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_dsf_gpu.cpp.o
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[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_tstat_gpu.cpp.o
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[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp: In member function 'void LAMMPS_NS::PairDPDGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_dpd_gpu.cpp:405:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp: In member function 'void LAMMPS_NS::PairGaussGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gauss_gpu.cpp:230:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJ96CutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj96_cut_gpu.cpp:226:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCubicGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp:234:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp:231:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cubic_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_gpu.cpp:236:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_cut_gpu.cpp:248:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:252:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:252:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:255:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:282:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:283:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:269:28: warning: 'forcecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:276:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:282:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_gpu.cpp:239:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp: In member function 'void LAMMPS_NS::PairLJGromacsGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp:235:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_gromacs_gpu.cpp:241:74: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
               if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairMIECutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_mie_cut_gpu.cpp:225:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp: In member function 'void LAMMPS_NS::PairMorseGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_morse_gpu.cpp:221:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp: In member function 'void LAMMPS_NS::PairSoftGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_soft_gpu.cpp:232:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp: In member function 'void LAMMPS_NS::PairTableGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp:333:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp:333:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp:330:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_table_gpu.cpp:338:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp: In member function 'void LAMMPS_NS::PairUFMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_ufm_gpu.cpp:235:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_gpu.cpp:224:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp: In member function 'void LAMMPS_NS::PairZBLGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp:232:59: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_zbl_gpu.cpp:237:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp: In member function 'void LAMMPS_NS::PairGayBerneGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp:335:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_gayberne_gpu.cpp:338:63: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                       -r12[0],-r12[1],-r12[2]);
                                                               ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp: In member function 'void LAMMPS_NS::PairRESquaredGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp:310:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_resquared_gpu.cpp:313:73: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                       fforce[2],-r12[0],-r12[1],-r12[2]);
                                                                         ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2GPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_gpu.cpp:223:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:272:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:273:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:276:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_class2_coul_long_gpu.cpp:276:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp:302:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       f[i][2] += delz*fpair;
                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_colloid_gpu.cpp:298:36: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (eflag) evdwl *= factor_lj;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_yukawa_colloid_gpu.cpp:235:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:325:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:326:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:330:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_cs_gpu.cpp:329:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp:306:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp:311:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp:308:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_cs_gpu.cpp:308:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:284:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:281:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:281:72: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                                        ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:285:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:353:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:351:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:349:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:349:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:353:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:358:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp:282:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp:283:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp:287:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_born_coul_long_gpu.cpp:286:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:70: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:54: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:47: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:409:31: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:70: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:412:54: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:417:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp:274:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp:275:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp:279:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_buck_coul_long_gpu.cpp:279:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp:281:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp:286:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp:283:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_coul_long_gpu.cpp:283:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:317:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:322:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:326:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:326:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:305:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:310:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:314:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:307:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_long_gpu.cpp:307:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:283:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:278:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:287:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'ecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,ecoul,fpair,delx,dely,delz);
                                                                      ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_sw_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_sw_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_sw_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSGPU::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:376:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:377:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:378:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:379:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:404:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:426:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyGPU::read_file(char*)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_alloy_gpu.cpp:433:55: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (me == 0) grab(fptr,file->nr,&file->rhor[i][1]);
                                                       ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_gpu.cpp
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_mod_gpu.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_mod_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_mod_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_eam_fs_gpu.cpp:442:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_tersoff_zbl_gpu.cpp.o
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[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_vashishta_gpu.cpp.o
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/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:311:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:316:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:320:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:313:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_expand_coul_long_gpu.cpp:313:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJSFDipoleSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:388:25: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
                         ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:387:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               rsq*rcutlj2inv +
                  ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:380:35: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv * qpfac * pjdotr;
                                   ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:378:36: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv * pqfac * pidotr;
                                    ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:29: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                             ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:380:43: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv * qpfac * pjdotr;
                                           ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:378:44: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv * pqfac * pidotr;
                                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:37: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                     ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:376:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
                                                 ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:380:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv * qpfac * pjdotr;
                            ^
/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:385:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) +
                          ^
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[100%] Building CXX object CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/main.cpp.o
/usr/bin/c++  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src -I/usr/include/openmpi3-arm -I/usr/include/python3.6m -I/usr/include/kim-api -I/usr/lib/kim-api/mod -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/message/cslib/src -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/ASPHERE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/BODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CLASS2 -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/COLLOID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/CORESHELL -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/DIPOLE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GRANULAR -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KSPACE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MANYBODY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MESSAGE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MOLECULE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PERI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/POEMS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/QEQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/REPLICA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/RIGID -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SHOCK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SPIN -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SNAP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/SRD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/KIM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/PYTHON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/MPIIO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/VORONOI -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-ATC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-BOCS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGDNA -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MESO -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-CGSDK -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-COLVARS -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-DRUDE -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-EFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-FEP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-H5MD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MEAMC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MGPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MISC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-MOFFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PHONON -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-PTM -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-QTB -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-REAXC -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SDPD -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-SPH -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-TALLY -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-UEF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-YAFF -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/USER-OMP -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/OPT -I/builddir/build/BUILD/lammps-stable_7Aug2019/src/GPU -I/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/styles -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/poems -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/atc -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/colvars -I/builddir/build/BUILD/lammps-stable_7Aug2019/lib/h5md/include  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -fPIE   -o CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/main.cpp.o -c /builddir/build/BUILD/lammps-stable_7Aug2019/src/main.cpp
[100%] Linking CXX executable lmp_openmpi3
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/lmp.dir/link.txt --verbose=1
/usr/bin/c++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp  -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/openmpi3/lib -Wl,--enable-new-dtags -rdynamic CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-stable_7Aug2019/src/main.cpp.o  -o lmp_openmpi3 -Wl,-rpath,/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3:/usr/lib/openmpi3/lib: liblammps_openmpi3.so.0 /usr/lib/openmpi3/lib/libmpi_cxx.so /usr/lib/openmpi3/lib/libmpi.so -ljpeg -lpng -lfftw3 -lpython3.6m -lvoro++ -lkim-api libcsmpi.a -lm libpoems.a libatc.a -lopenblas libcolvars.a libh5md.a -lhdf5 -lsz -lz -ldl -lm libgpu.a -lOpenCL 
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3'
[100%] Built target lmp
make[1]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3'
/usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3/CMakeFiles 0
+ popd
~/build/BUILD/lammps-stable_7Aug2019
+ test -n openmpi3
+ module unload mpi/openmpi3-arm
++ /usr/bin/modulecmd sh unload mpi/openmpi3-arm
+ eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON2_SITEARCH;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;'
++ MANPATH=/usr/share/man:/usr/local/share/man
++ export MANPATH
++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ PKG_CONFIG_PATH=/usr/lib/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset LD_LIBRARY_PATH
++ unset LOADEDMODULES
++ unset MPI_BIN
++ unset MPI_COMPILER
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset MPI_INCLUDE
++ unset MPI_LIB
++ unset MPI_MAN
++ unset MPI_PYTHON2_SITEARCH
++ unset MPI_PYTHON_SITEARCH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ unset PYTHONPATH
++ unset _LMFILES_
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.ciJOyt
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm
++ dirname /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm
+ cd lammps-stable_7Aug2019
+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 8818 -ocomm=
+++ /bin/basename sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ '[' '' = '' ']'
+++ LOADEDMODULES=
+++ export LOADEDMODULES
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ for mpi in ''\'''\''' mpich openmpi openmpi3
+ /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm -C serial
make: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
/usr/bin/cmake3 -S/builddir/build/BUILD/lammps-stable_7Aug2019/cmake -B/builddir/build/BUILD/lammps-stable_7Aug2019/serial --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/progress.marks
/usr/bin/make -f CMakeFiles/Makefile2 all
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cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/msi2lmp.dir/DependInfo.cmake --color=
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[  1%] Built target msi2lmp
/usr/bin/make -f CMakeFiles/chain.x.dir/build.make CMakeFiles/chain.x.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/chain.x.dir/DependInfo.cmake --color=
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[  1%] Built target chain.x
/usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/mpi_stubs.dir/DependInfo.cmake --color=
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/usr/bin/make -f CMakeFiles/mpi_stubs.dir/build.make CMakeFiles/mpi_stubs.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
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[  1%] Built target mpi_stubs
/usr/bin/make -f CMakeFiles/cslib.dir/build.make CMakeFiles/cslib.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/cslib.dir/DependInfo.cmake --color=
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[  2%] Built target cslib
/usr/bin/make -f CMakeFiles/colvars.dir/build.make CMakeFiles/colvars.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/colvars.dir/DependInfo.cmake --color=
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[  4%] Built target colvars
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/gpu.dir/DependInfo.cmake --color=
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[ 11%] Built target gpu
/usr/bin/make -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/poems.dir/DependInfo.cmake --color=
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[ 14%] Built target poems
/usr/bin/make -f CMakeFiles/gitversion.dir/build.make CMakeFiles/gitversion.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/gitversion.dir/DependInfo.cmake --color=
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/usr/bin/make -f CMakeFiles/gitversion.dir/build.make CMakeFiles/gitversion.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
/usr/bin/cmake3 -DCMAKE_CURRENT_SOURCE_DIR="/builddir/build/BUILD/lammps-stable_7Aug2019/cmake" -DGIT_EXECUTABLE="GIT_EXECUTABLE-NOTFOUND" -DGIT_FOUND="FALSE" -DLAMMPS_STYLE_HEADERS_DIR="/builddir/build/BUILD/lammps-stable_7Aug2019/serial/styles" -P /builddir/build/BUILD/lammps-stable_7Aug2019/cmake/Modules/generate_lmpgitversion.cmake
-- Generating lmpgitversion.h...
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[ 14%] Built target gitversion
/usr/bin/make -f CMakeFiles/atc.dir/build.make CMakeFiles/atc.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/atc.dir/DependInfo.cmake --color=
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[ 19%] Built target atc
/usr/bin/make -f CMakeFiles/h5md.dir/build.make CMakeFiles/h5md.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/h5md.dir/DependInfo.cmake --color=
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/usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/depend
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cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/lammps.dir/DependInfo.cmake --color=
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[100%] Built target lammps
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cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color=
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cd /builddir/build/BUILD/lammps-stable_7Aug2019/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial /builddir/build/BUILD/lammps-stable_7Aug2019/serial/CMakeFiles/binary2txt.dir/DependInfo.cmake --color=
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Install the project...
/usr/bin/cmake3 -P cmake_install.cmake
-- Install configuration: ""
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/liblammps.so.0
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/liblammps.so
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/library.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/angle.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/atom.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/bond.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/citeme.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/comm.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/compute.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/dihedral.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/domain.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/error.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/fix.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/force.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/group.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/improper.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/input.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/kspace.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/lammps.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/lattice.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/lmppython.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/memory.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/modify.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/neighbor.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/neigh_list.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/output.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/pair.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/pointers.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/region.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/timer.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/universe.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/update.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/variable.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/pkgconfig/liblammps.pc
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/cmake/Modules/FindLAMMPS.cmake
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/bin/lmp
-- Set runtime path of "/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/bin/lmp" to ""
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/man/man1/lmp.1
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/bin/binary2txt
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/bin/msi2lmp
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/man/man1/msi2lmp.1
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/TiO.meam.spline
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/README.reax
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Cu_u3.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.rdx
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CuZr_mm.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiCGe.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiC_1994.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/NiAlH_jea.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Si.tersoff.modc
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/BNC.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Al_zhou.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/V6.1.mgpt.README
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.budzien
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.V_O_C_H
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CdTeSe.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ta6.8x.mgpt.parmin
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/charmm22.cmap
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/C.lcbop
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ag_u3.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/AlO.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.Fe_O_C_H
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/lib.comb3
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiC_1990.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/V6.1.mgpt.potin
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.AB
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CdZnTe_v2.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Mo_Chen_PRM2017.snapcoeff
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-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CH.airebo
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CoAl.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.smtbq.Al2O3
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.lg
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/GaN.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Cu_u6.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/BNCH.ILP
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/GaN_sw.poly
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Mo_Chen_PRM2017.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CuTa.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CdTe.sw
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiO.1994.vashishta
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CH.rebo
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiC.tersoff.zbl
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiC.meam
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Pd_u3.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/W_2940_2017_2_He_JW2013.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/W_He_JW2013.table
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CC.Lebedeva
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/GaN.sw
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Al_prb.agni
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CC.KC
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Si.sw
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Cu.meam
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.comb
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Mo_Chen_PRM2017.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ni.meam
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/W_2940_2017_2.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CH.KC
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-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/GaN_tersoff.poly
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Al_mm.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Au_u3.eam
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-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CdTe.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiC.vashishta
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-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ti.meam.sw.spline
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-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ni.adp
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-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Mo5.2.mgpt.README
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-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/FeP_mm.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.FC
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-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.cho
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/GaAs.bop.table
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make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/mpich /builddir/build/BUILD/lammps-stable_7Aug2019/mpich /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color=
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
make[2]: Nothing to be done for `CMakeFiles/ocl_get_devices.dir/build'.
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[100%] Built target ocl_get_devices
/usr/bin/make -f CMakeFiles/binary2txt.dir/build.make CMakeFiles/binary2txt.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
cd /builddir/build/BUILD/lammps-stable_7Aug2019/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/cmake /builddir/build/BUILD/lammps-stable_7Aug2019/mpich /builddir/build/BUILD/lammps-stable_7Aug2019/mpich /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/CMakeFiles/binary2txt.dir/DependInfo.cmake --color=
make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
/usr/bin/make -f CMakeFiles/binary2txt.dir/build.make CMakeFiles/binary2txt.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
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make[2]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
[100%] Built target binary2txt
make[1]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
/usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-stable_7Aug2019/mpich/CMakeFiles 0
/usr/bin/make -f CMakeFiles/Makefile2 preinstall
make[1]: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
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make[1]: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
Install the project...
/usr/bin/cmake3 -P cmake_install.cmake
-- Install configuration: ""
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/mpich/lib/liblammps_mpich.so.0
-- Set runtime path of "/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/mpich/lib/liblammps_mpich.so.0" to ""
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/mpich/lib/liblammps_mpich.so
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/library.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/angle.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/atom.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/bond.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/citeme.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/comm.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/compute.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/dihedral.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/domain.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/error.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/fix.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/force.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/group.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/improper.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/input.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/kspace.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/lammps.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/lattice.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/lmppython.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/memory.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/modify.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/neighbor.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/neigh_list.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/output.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/pair.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/pointers.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/region.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/timer.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/universe.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/update.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/include/lammps/variable.h
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/mpich/lib/pkgconfig/liblammps_mpich.pc
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/cmake/Modules/FindLAMMPS_mpich.cmake
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/mpich/bin/lmp_mpich
-- Set runtime path of "/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/mpich/bin/lmp_mpich" to ""
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/man/mpich/man1/lmp_mpich.1
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/mpich/bin/binary2txt
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/mpich/bin/msi2lmp
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/man/mpich/man1/msi2lmp.1
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/TiO.meam.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/README.reax
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Cu_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.rdx
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CuZr_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiCGe.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiC_1994.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/NiAlH_jea.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Si.tersoff.modc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/BNC.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Al_zhou.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/V6.1.mgpt.README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.budzien
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.V_O_C_H
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CdTeSe.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ta6.8x.mgpt.parmin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/charmm22.cmap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/C.lcbop
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ag_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/AlO.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.Fe_O_C_H
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/lib.comb3
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiC_1990.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/V6.1.mgpt.potin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.AB
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CdZnTe_v2.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Mo_Chen_PRM2017.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ge.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/AlCu.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CH.airebo
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CoAl.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.smtbq.Al2O3
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.lg
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/GaN.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Cu_u6.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/BNCH.ILP
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/GaN_sw.poly
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Mo_Chen_PRM2017.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CuTa.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CdTe.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiO.1994.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CH.rebo
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiC.tersoff.zbl
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiC.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Pd_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/W_2940_2017_2_He_JW2013.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/W_He_JW2013.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CC.Lebedeva
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/GaN.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Al_prb.agni
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CC.KC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Si.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Cu.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.comb
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Mo_Chen_PRM2017.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ni.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/W_2940_2017_2.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CH.KC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.ZnOH
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/GaN_tersoff.poly
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Al_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Au_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiC.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/FeCr.cdeam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CdTe.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiC.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/W_2940_2017_2.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ti.meam.sw.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/W_zhou.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ni.adp
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ti.meam.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.comb3
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ta4.mgpt.parmin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Mg_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CuH.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiC.gw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ta06A.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/charmm36.cmap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CdTeZnSeHgS0.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Mo5.2.mgpt.potin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Pt_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/AlSiMgCuFe.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ta06A.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Mo5.2.mgpt.README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CdZnTe_v1.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/AlCu.adp
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/FeP_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.FC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Cu_zhou.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Si_2.meam.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.cho
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Install the project...
/usr/bin/cmake3 -P cmake_install.cmake
-- Install configuration: ""
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-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/openmpi/bin/binary2txt
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/V6.1.mgpt.README
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Install the project...
/usr/bin/cmake3 -P cmake_install.cmake
-- Install configuration: ""
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-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/cmake/Modules/FindLAMMPS_openmpi3.cmake
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/openmpi3/bin/lmp_openmpi3
-- Set runtime path of "/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/openmpi3/bin/lmp_openmpi3" to ""
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/man/openmpi3-arm/man1/lmp_openmpi3.1
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/openmpi3/bin/binary2txt
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/openmpi3/bin/msi2lmp
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/man/openmpi3-arm/man1/msi2lmp.1
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/README.reax
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Cu_u3.eam
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/NiAlH_jea.eam.fs
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/V6.1.mgpt.README
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.V_O_C_H
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiC.gw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ta06A.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/charmm36.cmap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CdTeZnSeHgS0.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Mo5.2.mgpt.potin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Pt_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/AlSiMgCuFe.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ta06A.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Mo5.2.mgpt.README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CdZnTe_v1.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/AlCu.adp
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/FeP_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.FC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Cu_zhou.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Si_2.meam.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.cho
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/GaAs.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/VFe_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Cu_smf7.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.ci-reax.CH
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiO.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.AuO
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CH.airebo-m
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CuNi.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CCu_v2.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/He_He_JW2013.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ni_smf7.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Fe_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CH_taper.KC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Zr_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Mo5.2.mgpt.parmin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/AlO.streitz
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/library.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.smtbq.TiO2
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiC.gw.zbl
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ci-reaxFF_ZBL.dat
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiO.1990.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiC_1989.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.smtbq.Al
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ta4.mgpt.README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/BN.extep
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/AlFe_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ta06A.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/AlCu.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/InP.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiC.edip
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/C.drip
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.reax.mattsson
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/WL.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ta6.8x.mgpt.potin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/MOH.nb3b.harmonic
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiC_Erhart-Albe.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Si.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/BNCH-old.ILP
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ni_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/SiO.1997.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Al_jpc.agni
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Si.tersoff.mod
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Si.b.meam.sw.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ta6.8x.mgpt.README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/V6.1.mgpt.parmin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Si_1.meam.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/W_2940_2017_2.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/ffield.eim
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Si.edip
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Al_jnp.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CuTa_eam.poly
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Ta4.mgpt.potin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/NiAlH_jea.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/Cu_mishin1.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/potentials/CC.KC-full
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/frc_files
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/frc_files/pcff_templates.dat
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/frc_files/cff91.frc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/frc_files/compass_published.frc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/frc_files/cvff.frc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/frc_files/clayff.frc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/frc_files/README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/frc_files/cvff_aug.frc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/frc_files/pcff.frc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/frc_files/oplsaa.frc
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/lammps/frc_files/pcff.rlb
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/etc/profile.d/lammps.sh
-- Installing: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/etc/profile.d/lammps.csh
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/python3.6/site-packages/lammps.py
make: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3'
removed '/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/mpich/bin/msi2lmp'
removed '/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/openmpi/bin/msi2lmp'
removed '/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/openmpi3/bin/msi2lmp'
removed '/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/mpich/bin/binary2txt'
removed '/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/openmpi/bin/binary2txt'
removed '/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/openmpi3/bin/binary2txt'
removed '/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/man/mpich/man1/msi2lmp.1'
removed '/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/man/openmpi-arm/man1/msi2lmp.1'
removed '/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/man/openmpi3-arm/man1/msi2lmp.1'
+ rm -v /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/mpich/bin/msi2lmp /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/openmpi/bin/msi2lmp /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/openmpi3/bin/msi2lmp /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/mpich/bin/binary2txt /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/openmpi/bin/binary2txt /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/openmpi3/bin/binary2txt /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/man/mpich/man1/msi2lmp.1 /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/man/openmpi-arm/man1/msi2lmp.1 /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/man/openmpi3-arm/man1/msi2lmp.1
+ /usr/lib/rpm/find-debuginfo.sh --strict-build-id -m --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 /builddir/build/BUILD/lammps-stable_7Aug2019
extracting debug info from /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/bin/msi2lmp
extracting debug info from /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/bin/lmp
extracting debug info from /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/bin/binary2txt
extracting debug info from /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/liblammps.so.0
extracting debug info from /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/openmpi3/bin/lmp_openmpi3
extracting debug info from /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/openmpi3/lib/liblammps_openmpi3.so.0
extracting debug info from /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/openmpi/bin/lmp_openmpi
extracting debug info from /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/openmpi/lib/liblammps_openmpi.so.0
extracting debug info from /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/mpich/bin/lmp_mpich
extracting debug info from /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/mpich/lib/liblammps_mpich.so.0
/usr/lib/rpm/sepdebugcrcfix: Updated 10 CRC32s, 0 CRC32s did match.
symlinked /usr/lib/debug/usr/lib/liblammps.so.0.debug to /usr/lib/debug/usr/lib/liblammps.so.debug
symlinked /usr/lib/debug/usr/lib/openmpi3/lib/liblammps_openmpi3.so.0.debug to /usr/lib/debug/usr/lib/openmpi3/lib/liblammps_openmpi3.so.debug
symlinked /usr/lib/debug/usr/lib/openmpi/lib/liblammps_openmpi.so.0.debug to /usr/lib/debug/usr/lib/openmpi/lib/liblammps_openmpi.so.debug
symlinked /usr/lib/debug/usr/lib/mpich/lib/liblammps_mpich.so.0.debug to /usr/lib/debug/usr/lib/mpich/lib/liblammps_mpich.so.debug
75603 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1
Bytecompiling .py files below /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/lib/python3.6 using /usr/bin/python3.6
+ /usr/lib/rpm/redhat/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-java-repack-jars
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.CuiHmD
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-stable_7Aug2019
+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 10424 -ocomm=
+++ /bin/basename sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ '[' '' = '' ']'
+++ LOADEDMODULES=
+++ export LOADEDMODULES
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ for mpi in ''\'''\''' mpich openmpi openmpi3
+ test -n ''
+ make -C serial -j4 test CTEST_OUTPUT_ON_FAILURE=1
make: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
Running tests...
/usr/bin/ctest3 --force-new-ctest-process 
Test project /builddir/build/BUILD/lammps-stable_7Aug2019/serial
      Start  1: ShowHelp
 1/54 Test  #1: ShowHelp ..............................   Passed    0.54 sec
      Start  2: test_core_balance_001_serial
 2/54 Test  #2: test_core_balance_001_serial ..........   Passed    1.10 sec
      Start  3: test_core_balance_002_serial
 3/54 Test  #3: test_core_balance_002_serial ..........   Passed    1.02 sec
      Start  4: test_core_balance_003_serial
 4/54 Test  #4: test_core_balance_003_serial ..........   Passed    1.00 sec
      Start  5: test_core_balance_004_serial
 5/54 Test  #5: test_core_balance_004_serial ..........   Passed    1.02 sec
      Start  6: test_core_balance_005_serial
 6/54 Test  #6: test_core_balance_005_serial ..........   Passed    1.03 sec
      Start  7: test_core_balance_006_serial
 7/54 Test  #7: test_core_balance_006_serial ..........   Passed    1.02 sec
      Start  8: test_core_comm_style_001_serial
 8/54 Test  #8: test_core_comm_style_001_serial .......   Passed    1.00 sec
      Start  9: test_core_comm_style_002_serial
 9/54 Test  #9: test_core_comm_style_002_serial .......   Passed    1.04 sec
      Start 10: test_core_displace_atoms_000_serial
10/54 Test #10: test_core_displace_atoms_000_serial ...   Passed    7.20 sec
      Start 11: test_core_displace_atoms_001_serial
11/54 Test #11: test_core_displace_atoms_001_serial ...   Passed    6.76 sec
      Start 12: test_core_displace_atoms_002_serial
12/54 Test #12: test_core_displace_atoms_002_serial ...   Passed    6.78 sec
      Start 13: test_core_empty_000_serial
13/54 Test #13: test_core_empty_000_serial ............   Passed    0.13 sec
      Start 14: test_core_empty_001_serial
14/54 Test #14: test_core_empty_001_serial ............   Passed    0.11 sec
      Start 15: test_core_empty_002_serial
15/54 Test #15: test_core_empty_002_serial ............   Passed    0.10 sec
      Start 16: test_core_min_001_serial
16/54 Test #16: test_core_min_001_serial ..............   Passed    8.15 sec
      Start 17: test_core_min_002_serial
17/54 Test #17: test_core_min_002_serial ..............   Passed   40.54 sec
      Start 18: test_core_min_003_serial
18/54 Test #18: test_core_min_003_serial ..............   Passed    8.51 sec
      Start 19: test_core_min_004_serial
19/54 Test #19: test_core_min_004_serial ..............   Passed    4.39 sec
      Start 20: test_core_min_005_serial
20/54 Test #20: test_core_min_005_serial ..............   Passed    4.41 sec
      Start 21: test_core_min_006_serial
21/54 Test #21: test_core_min_006_serial ..............   Passed    4.56 sec
      Start 22: test_core_min_007_serial
22/54 Test #22: test_core_min_007_serial ..............   Passed    9.07 sec
      Start 23: test_core_min_008_serial
23/54 Test #23: test_core_min_008_serial ..............   Passed    4.51 sec
      Start 24: test_core_min_009_serial
24/54 Test #24: test_core_min_009_serial ..............   Passed    9.53 sec
      Start 25: test_core_processors_001_serial
25/54 Test #25: test_core_processors_001_serial .......   Passed    1.03 sec
      Start 26: test_core_processors_002_serial
26/54 Test #26: test_core_processors_002_serial .......   Passed    1.01 sec
      Start 27: test_core_read_data_001_serial
27/54 Test #27: test_core_read_data_001_serial ........   Passed    0.11 sec
      Start 28: test_core_read_data_002_serial
28/54 Test #28: test_core_read_data_002_serial ........   Passed    0.11 sec
      Start 29: test_core_read_data_003_serial
29/54 Test #29: test_core_read_data_003_serial ........   Passed    0.11 sec
      Start 30: test_core_read_data_004_serial
30/54 Test #30: test_core_read_data_004_serial ........   Passed    0.11 sec
      Start 31: test_core_read_data_005_serial
31/54 Test #31: test_core_read_data_005_serial ........   Passed    0.10 sec
      Start 32: test_core_read_data_006_serial
32/54 Test #32: test_core_read_data_006_serial ........   Passed    0.11 sec
      Start 33: test_core_rerun_001_serial
33/54 Test #33: test_core_rerun_001_serial ............   Passed    8.43 sec
      Start 34: test_core_rerun_002_serial
34/54 Test #34: test_core_rerun_002_serial ............   Passed   10.41 sec
      Start 35: test_core_rerun_003_serial
35/54 Test #35: test_core_rerun_003_serial ............   Passed    8.34 sec
      Start 36: test_core_rerun_004_serial
36/54 Test #36: test_core_rerun_004_serial ............   Passed    8.71 sec
      Start 37: test_core_rerun_005_serial
37/54 Test #37: test_core_rerun_005_serial ............   Passed    8.70 sec
      Start 38: test_core_rerun_006_serial
38/54 Test #38: test_core_rerun_006_serial ............   Passed    8.39 sec
      Start 39: test_core_respa_000_serial
39/54 Test #39: test_core_respa_000_serial ............   Passed   70.17 sec
      Start 40: test_core_respa_001_serial
40/54 Test #40: test_core_respa_001_serial ............   Passed   70.56 sec
      Start 41: test_core_respa_002_serial
41/54 Test #41: test_core_respa_002_serial ............   Passed    0.10 sec
      Start 42: test_core_respa_003_serial
42/54 Test #42: test_core_respa_003_serial ............   Passed    0.10 sec
      Start 43: test_core_respa_004_serial
43/54 Test #43: test_core_respa_004_serial ............   Passed    0.10 sec
      Start 44: test_core_respa_005_serial
44/54 Test #44: test_core_respa_005_serial ............   Passed    0.10 sec
      Start 45: test_core_respa_006_serial
45/54 Test #45: test_core_respa_006_serial ............   Passed    0.10 sec
      Start 46: test_core_respa_007_serial
46/54 Test #46: test_core_respa_007_serial ............   Passed    0.10 sec
      Start 47: test_core_respa_008_serial
47/54 Test #47: test_core_respa_008_serial ............   Passed    0.10 sec
      Start 48: test_core_respa_100_serial
48/54 Test #48: test_core_respa_100_serial ............   Passed   71.30 sec
      Start 49: test_core_respa_101_serial
49/54 Test #49: test_core_respa_101_serial ............   Passed   71.26 sec
      Start 50: test_core_respa_102_serial
50/54 Test #50: test_core_respa_102_serial ............   Passed   70.52 sec
      Start 51: test_core_respa_103_serial
51/54 Test #51: test_core_respa_103_serial ............   Passed   57.17 sec
      Start 52: test_core_respa_200_serial
52/54 Test #52: test_core_respa_200_serial ............   Passed    2.15 sec
      Start 53: test_core_respa_201_serial
53/54 Test #53: test_core_respa_201_serial ............   Passed    2.65 sec
      Start 54: test_core_respa_202_serial
54/54 Test #54: test_core_respa_202_serial ............   Passed    3.05 sec
100% tests passed, 0 tests failed out of 54
Total Test time (real) = 599.13 sec
make: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/serial'
+ test -n ''
+ for mpi in ''\'''\''' mpich openmpi openmpi3
+ test -n mpich
+ module load mpi/mpich-arm
++ /usr/bin/modulecmd sh load mpi/mpich-arm
+ eval LD_LIBRARY_PATH=/usr/lib/mpich/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/mpich-arm' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/mpich:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib/mpich/bin' ';export' 'MPI_BIN;MPI_COMPILER=mpich-arm' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/mpich-arm' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib/mpich' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/mpich-arm' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib/mpich/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/mpich' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/mpich' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_mpich' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/mpich-arm' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib/mpich/lib/pkgconfig:/usr/lib/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;PYTHONPATH=/usr/lib/python2.7/site-packages/mpich' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/mpich-arm' ';export' '_LMFILES_;'
++ LD_LIBRARY_PATH=/usr/lib/mpich/lib
++ export LD_LIBRARY_PATH
++ LOADEDMODULES=mpi/mpich-arm
++ export LOADEDMODULES
++ MANPATH=/usr/share/man/mpich:/usr/share/man:/usr/local/share/man
++ export MANPATH
++ MPI_BIN=/usr/lib/mpich/bin
++ export MPI_BIN
++ MPI_COMPILER=mpich-arm
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/mpich-arm
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib/mpich
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/mpich-arm
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib/mpich/lib
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/mpich
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/mpich
++ export MPI_PYTHON_SITEARCH
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/mpich-arm
++ export MPI_SYSCONFIG
++ PATH=/usr/lib/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ PKG_CONFIG_PATH=/usr/lib/mpich/lib/pkgconfig:/usr/lib/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ PYTHONPATH=/usr/lib/python2.7/site-packages/mpich
++ export PYTHONPATH
++ _LMFILES_=/etc/modulefiles/mpi/mpich-arm
++ export _LMFILES_
+ make -C mpich -j4 test CTEST_OUTPUT_ON_FAILURE=1
make: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
Running tests...
/usr/bin/ctest3 --force-new-ctest-process 
Test project /builddir/build/BUILD/lammps-stable_7Aug2019/mpich
      Start  1: ShowHelp
 1/54 Test  #1: ShowHelp ..............................   Passed    0.48 sec
      Start  2: test_core_balance_001_serial
 2/54 Test  #2: test_core_balance_001_serial ..........   Passed    1.12 sec
      Start  3: test_core_balance_002_serial
 3/54 Test  #3: test_core_balance_002_serial ..........   Passed    1.04 sec
      Start  4: test_core_balance_003_serial
 4/54 Test  #4: test_core_balance_003_serial ..........   Passed    1.04 sec
      Start  5: test_core_balance_004_serial
 5/54 Test  #5: test_core_balance_004_serial ..........   Passed    1.04 sec
      Start  6: test_core_balance_005_serial
 6/54 Test  #6: test_core_balance_005_serial ..........   Passed    1.07 sec
      Start  7: test_core_balance_006_serial
 7/54 Test  #7: test_core_balance_006_serial ..........   Passed    1.06 sec
      Start  8: test_core_comm_style_001_serial
 8/54 Test  #8: test_core_comm_style_001_serial .......   Passed    1.06 sec
      Start  9: test_core_comm_style_002_serial
 9/54 Test  #9: test_core_comm_style_002_serial .......   Passed    1.05 sec
      Start 10: test_core_displace_atoms_000_serial
10/54 Test #10: test_core_displace_atoms_000_serial ...   Passed    6.82 sec
      Start 11: test_core_displace_atoms_001_serial
11/54 Test #11: test_core_displace_atoms_001_serial ...   Passed    6.72 sec
      Start 12: test_core_displace_atoms_002_serial
12/54 Test #12: test_core_displace_atoms_002_serial ...   Passed    6.65 sec
      Start 13: test_core_empty_000_serial
13/54 Test #13: test_core_empty_000_serial ............   Passed    0.13 sec
      Start 14: test_core_empty_001_serial
14/54 Test #14: test_core_empty_001_serial ............   Passed    0.14 sec
      Start 15: test_core_empty_002_serial
15/54 Test #15: test_core_empty_002_serial ............   Passed    0.13 sec
      Start 16: test_core_min_001_serial
16/54 Test #16: test_core_min_001_serial ..............   Passed    8.24 sec
      Start 17: test_core_min_002_serial
17/54 Test #17: test_core_min_002_serial ..............   Passed   40.25 sec
      Start 18: test_core_min_003_serial
18/54 Test #18: test_core_min_003_serial ..............   Passed    8.70 sec
      Start 19: test_core_min_004_serial
19/54 Test #19: test_core_min_004_serial ..............   Passed    4.36 sec
      Start 20: test_core_min_005_serial
20/54 Test #20: test_core_min_005_serial ..............   Passed    4.42 sec
      Start 21: test_core_min_006_serial
21/54 Test #21: test_core_min_006_serial ..............   Passed    4.63 sec
      Start 22: test_core_min_007_serial
22/54 Test #22: test_core_min_007_serial ..............   Passed    8.96 sec
      Start 23: test_core_min_008_serial
23/54 Test #23: test_core_min_008_serial ..............   Passed    4.54 sec
      Start 24: test_core_min_009_serial
24/54 Test #24: test_core_min_009_serial ..............   Passed    9.42 sec
      Start 25: test_core_processors_001_serial
25/54 Test #25: test_core_processors_001_serial .......   Passed    1.04 sec
      Start 26: test_core_processors_002_serial
26/54 Test #26: test_core_processors_002_serial .......   Passed    1.05 sec
      Start 27: test_core_read_data_001_serial
27/54 Test #27: test_core_read_data_001_serial ........   Passed    0.14 sec
      Start 28: test_core_read_data_002_serial
28/54 Test #28: test_core_read_data_002_serial ........   Passed    0.13 sec
      Start 29: test_core_read_data_003_serial
29/54 Test #29: test_core_read_data_003_serial ........   Passed    0.12 sec
      Start 30: test_core_read_data_004_serial
30/54 Test #30: test_core_read_data_004_serial ........   Passed    0.13 sec
      Start 31: test_core_read_data_005_serial
31/54 Test #31: test_core_read_data_005_serial ........   Passed    0.13 sec
      Start 32: test_core_read_data_006_serial
32/54 Test #32: test_core_read_data_006_serial ........   Passed    0.14 sec
      Start 33: test_core_rerun_001_serial
33/54 Test #33: test_core_rerun_001_serial ............   Passed    8.44 sec
      Start 34: test_core_rerun_002_serial
34/54 Test #34: test_core_rerun_002_serial ............   Passed   10.48 sec
      Start 35: test_core_rerun_003_serial
35/54 Test #35: test_core_rerun_003_serial ............   Passed    8.39 sec
      Start 36: test_core_rerun_004_serial
36/54 Test #36: test_core_rerun_004_serial ............   Passed    8.76 sec
      Start 37: test_core_rerun_005_serial
37/54 Test #37: test_core_rerun_005_serial ............   Passed    8.69 sec
      Start 38: test_core_rerun_006_serial
38/54 Test #38: test_core_rerun_006_serial ............   Passed    8.40 sec
      Start 39: test_core_respa_000_serial
39/54 Test #39: test_core_respa_000_serial ............   Passed   70.39 sec
      Start 40: test_core_respa_001_serial
40/54 Test #40: test_core_respa_001_serial ............   Passed   71.77 sec
      Start 41: test_core_respa_002_serial
41/54 Test #41: test_core_respa_002_serial ............   Passed    0.11 sec
      Start 42: test_core_respa_003_serial
42/54 Test #42: test_core_respa_003_serial ............   Passed    0.11 sec
      Start 43: test_core_respa_004_serial
43/54 Test #43: test_core_respa_004_serial ............   Passed    0.11 sec
      Start 44: test_core_respa_005_serial
44/54 Test #44: test_core_respa_005_serial ............   Passed    0.11 sec
      Start 45: test_core_respa_006_serial
45/54 Test #45: test_core_respa_006_serial ............   Passed    0.11 sec
      Start 46: test_core_respa_007_serial
46/54 Test #46: test_core_respa_007_serial ............   Passed    0.11 sec
      Start 47: test_core_respa_008_serial
47/54 Test #47: test_core_respa_008_serial ............   Passed    0.11 sec
      Start 48: test_core_respa_100_serial
48/54 Test #48: test_core_respa_100_serial ............   Passed   70.90 sec
      Start 49: test_core_respa_101_serial
49/54 Test #49: test_core_respa_101_serial ............   Passed   70.73 sec
      Start 50: test_core_respa_102_serial
50/54 Test #50: test_core_respa_102_serial ............   Passed   70.58 sec
      Start 51: test_core_respa_103_serial
51/54 Test #51: test_core_respa_103_serial ............   Passed   57.08 sec
      Start 52: test_core_respa_200_serial
52/54 Test #52: test_core_respa_200_serial ............   Passed    2.09 sec
      Start 53: test_core_respa_201_serial
53/54 Test #53: test_core_respa_201_serial ............   Passed    2.71 sec
      Start 54: test_core_respa_202_serial
54/54 Test #54: test_core_respa_202_serial ............   Passed    3.08 sec
100% tests passed, 0 tests failed out of 54
Total Test time (real) = 599.62 sec
make: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/mpich'
+ test -n mpich
+ module unload mpi/mpich-arm
++ /usr/bin/modulecmd sh unload mpi/mpich-arm
+ eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;'
++ MANPATH=/usr/share/man:/usr/local/share/man
++ export MANPATH
++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ PKG_CONFIG_PATH=/usr/lib/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset LD_LIBRARY_PATH
++ unset LOADEDMODULES
++ unset MPI_BIN
++ unset MPI_COMPILER
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset MPI_INCLUDE
++ unset MPI_LIB
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ unset PYTHONPATH
++ unset _LMFILES_
+ for mpi in ''\'''\''' mpich openmpi openmpi3
+ test -n openmpi
+ module load mpi/openmpi-arm
++ /usr/bin/modulecmd sh load mpi/openmpi-arm
+ eval LD_LIBRARY_PATH=/usr/lib/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi-arm' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-arm:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-arm' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi-arm' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-arm' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-arm' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-arm' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi-arm' ';export' '_LMFILES_;'
++ LD_LIBRARY_PATH=/usr/lib/openmpi/lib
++ export LD_LIBRARY_PATH
++ LOADEDMODULES=mpi/openmpi-arm
++ export LOADEDMODULES
++ MANPATH=/usr/share/man/openmpi-arm:/usr/share/man:/usr/local/share/man
++ export MANPATH
++ MPI_BIN=/usr/lib/openmpi/bin
++ export MPI_BIN
++ MPI_COMPILER=openmpi-arm
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi-arm
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib/openmpi
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/openmpi-arm
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib/openmpi/lib
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/openmpi-arm
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi
++ export MPI_PYTHON_SITEARCH
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi-arm
++ export MPI_SYSCONFIG
++ PATH=/usr/lib/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi
++ export PYTHONPATH
++ _LMFILES_=/etc/modulefiles/mpi/openmpi-arm
++ export _LMFILES_
+ make -C openmpi -j4 test CTEST_OUTPUT_ON_FAILURE=1
make: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi'
Running tests...
/usr/bin/ctest3 --force-new-ctest-process 
Test project /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi
      Start  1: ShowHelp
 1/54 Test  #1: ShowHelp ..............................   Passed    0.93 sec
      Start  2: test_core_balance_001_serial
 2/54 Test  #2: test_core_balance_001_serial ..........   Passed    1.24 sec
      Start  3: test_core_balance_002_serial
 3/54 Test  #3: test_core_balance_002_serial ..........   Passed    1.20 sec
      Start  4: test_core_balance_003_serial
 4/54 Test  #4: test_core_balance_003_serial ..........   Passed    1.19 sec
      Start  5: test_core_balance_004_serial
 5/54 Test  #5: test_core_balance_004_serial ..........   Passed    1.21 sec
      Start  6: test_core_balance_005_serial
 6/54 Test  #6: test_core_balance_005_serial ..........   Passed    1.22 sec
      Start  7: test_core_balance_006_serial
 7/54 Test  #7: test_core_balance_006_serial ..........   Passed    1.29 sec
      Start  8: test_core_comm_style_001_serial
 8/54 Test  #8: test_core_comm_style_001_serial .......   Passed    1.21 sec
      Start  9: test_core_comm_style_002_serial
 9/54 Test  #9: test_core_comm_style_002_serial .......   Passed    1.19 sec
      Start 10: test_core_displace_atoms_000_serial
10/54 Test #10: test_core_displace_atoms_000_serial ...   Passed    6.95 sec
      Start 11: test_core_displace_atoms_001_serial
11/54 Test #11: test_core_displace_atoms_001_serial ...   Passed    6.92 sec
      Start 12: test_core_displace_atoms_002_serial
12/54 Test #12: test_core_displace_atoms_002_serial ...   Passed    6.93 sec
      Start 13: test_core_empty_000_serial
13/54 Test #13: test_core_empty_000_serial ............   Passed    0.28 sec
      Start 14: test_core_empty_001_serial
14/54 Test #14: test_core_empty_001_serial ............   Passed    0.28 sec
      Start 15: test_core_empty_002_serial
15/54 Test #15: test_core_empty_002_serial ............   Passed    0.28 sec
      Start 16: test_core_min_001_serial
16/54 Test #16: test_core_min_001_serial ..............   Passed    8.44 sec
      Start 17: test_core_min_002_serial
17/54 Test #17: test_core_min_002_serial ..............   Passed   42.04 sec
      Start 18: test_core_min_003_serial
18/54 Test #18: test_core_min_003_serial ..............   Passed    8.75 sec
      Start 19: test_core_min_004_serial
19/54 Test #19: test_core_min_004_serial ..............   Passed    4.53 sec
      Start 20: test_core_min_005_serial
20/54 Test #20: test_core_min_005_serial ..............   Passed    4.61 sec
      Start 21: test_core_min_006_serial
21/54 Test #21: test_core_min_006_serial ..............   Passed    4.85 sec
      Start 22: test_core_min_007_serial
22/54 Test #22: test_core_min_007_serial ..............   Passed    9.22 sec
      Start 23: test_core_min_008_serial
23/54 Test #23: test_core_min_008_serial ..............   Passed    4.74 sec
      Start 24: test_core_min_009_serial
24/54 Test #24: test_core_min_009_serial ..............   Passed    9.83 sec
      Start 25: test_core_processors_001_serial
25/54 Test #25: test_core_processors_001_serial .......   Passed    1.21 sec
      Start 26: test_core_processors_002_serial
26/54 Test #26: test_core_processors_002_serial .......   Passed    1.19 sec
      Start 27: test_core_read_data_001_serial
27/54 Test #27: test_core_read_data_001_serial ........   Passed    0.29 sec
      Start 28: test_core_read_data_002_serial
28/54 Test #28: test_core_read_data_002_serial ........   Passed    0.29 sec
      Start 29: test_core_read_data_003_serial
29/54 Test #29: test_core_read_data_003_serial ........   Passed    0.31 sec
      Start 30: test_core_read_data_004_serial
30/54 Test #30: test_core_read_data_004_serial ........   Passed    0.28 sec
      Start 31: test_core_read_data_005_serial
31/54 Test #31: test_core_read_data_005_serial ........   Passed    0.29 sec
      Start 32: test_core_read_data_006_serial
32/54 Test #32: test_core_read_data_006_serial ........   Passed    0.28 sec
      Start 33: test_core_rerun_001_serial
33/54 Test #33: test_core_rerun_001_serial ............   Passed    8.65 sec
      Start 34: test_core_rerun_002_serial
34/54 Test #34: test_core_rerun_002_serial ............   Passed   10.73 sec
      Start 35: test_core_rerun_003_serial
35/54 Test #35: test_core_rerun_003_serial ............   Passed    8.60 sec
      Start 36: test_core_rerun_004_serial
36/54 Test #36: test_core_rerun_004_serial ............   Passed    8.95 sec
      Start 37: test_core_rerun_005_serial
37/54 Test #37: test_core_rerun_005_serial ............   Passed    9.00 sec
      Start 38: test_core_rerun_006_serial
38/54 Test #38: test_core_rerun_006_serial ............   Passed    8.70 sec
      Start 39: test_core_respa_000_serial
39/54 Test #39: test_core_respa_000_serial ............   Passed   72.20 sec
      Start 40: test_core_respa_001_serial
40/54 Test #40: test_core_respa_001_serial ............   Passed   72.18 sec
      Start 41: test_core_respa_002_serial
41/54 Test #41: test_core_respa_002_serial ............   Passed    0.28 sec
      Start 42: test_core_respa_003_serial
42/54 Test #42: test_core_respa_003_serial ............   Passed    0.27 sec
      Start 43: test_core_respa_004_serial
43/54 Test #43: test_core_respa_004_serial ............   Passed    0.27 sec
      Start 44: test_core_respa_005_serial
44/54 Test #44: test_core_respa_005_serial ............   Passed    0.27 sec
      Start 45: test_core_respa_006_serial
45/54 Test #45: test_core_respa_006_serial ............   Passed    0.32 sec
      Start 46: test_core_respa_007_serial
46/54 Test #46: test_core_respa_007_serial ............   Passed    0.28 sec
      Start 47: test_core_respa_008_serial
47/54 Test #47: test_core_respa_008_serial ............   Passed    0.28 sec
      Start 48: test_core_respa_100_serial
48/54 Test #48: test_core_respa_100_serial ............   Passed   71.50 sec
      Start 49: test_core_respa_101_serial
49/54 Test #49: test_core_respa_101_serial ............   Passed   72.19 sec
      Start 50: test_core_respa_102_serial
50/54 Test #50: test_core_respa_102_serial ............   Passed   72.80 sec
      Start 51: test_core_respa_103_serial
51/54 Test #51: test_core_respa_103_serial ............   Passed   58.94 sec
      Start 52: test_core_respa_200_serial
52/54 Test #52: test_core_respa_200_serial ............   Passed    2.29 sec
      Start 53: test_core_respa_201_serial
53/54 Test #53: test_core_respa_201_serial ............   Passed    2.78 sec
      Start 54: test_core_respa_202_serial
54/54 Test #54: test_core_respa_202_serial ............   Passed    3.23 sec
100% tests passed, 0 tests failed out of 54
Total Test time (real) = 618.57 sec
make: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi'
+ test -n openmpi
+ module unload mpi/openmpi-arm
++ /usr/bin/modulecmd sh unload mpi/openmpi-arm
+ eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;'
++ MANPATH=/usr/share/man:/usr/local/share/man
++ export MANPATH
++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ unset LD_LIBRARY_PATH
++ unset LOADEDMODULES
++ unset MPI_BIN
++ unset MPI_COMPILER
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset MPI_INCLUDE
++ unset MPI_LIB
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ unset PYTHONPATH
++ unset _LMFILES_
+ for mpi in ''\'''\''' mpich openmpi openmpi3
+ test -n openmpi3
+ module load mpi/openmpi3-arm
++ /usr/bin/modulecmd sh load mpi/openmpi3-arm
+ eval LD_LIBRARY_PATH=/usr/lib/openmpi3/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi3-arm' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi3-arm:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib/openmpi3/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi3-arm' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi3' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib/openmpi3' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi3-arm' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib/openmpi3/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi3-arm' ';export' 'MPI_MAN;MPI_PYTHON2_SITEARCH=/usr/lib/python2.7/site-packages/openmpi3' ';export' 'MPI_PYTHON2_SITEARCH;MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi3' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi3' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi3-arm' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib/openmpi3/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib/openmpi3/lib/pkgconfig:/usr/lib/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi3' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi3-arm' ';export' '_LMFILES_;'
++ LD_LIBRARY_PATH=/usr/lib/openmpi3/lib
++ export LD_LIBRARY_PATH
++ LOADEDMODULES=mpi/openmpi3-arm
++ export LOADEDMODULES
++ MANPATH=/usr/share/man/openmpi3-arm:/usr/share/man:/usr/local/share/man
++ export MANPATH
++ MPI_BIN=/usr/lib/openmpi3/bin
++ export MPI_BIN
++ MPI_COMPILER=openmpi3-arm
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi3
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib/openmpi3
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/openmpi3-arm
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib/openmpi3/lib
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/openmpi3-arm
++ export MPI_MAN
++ MPI_PYTHON2_SITEARCH=/usr/lib/python2.7/site-packages/openmpi3
++ export MPI_PYTHON2_SITEARCH
++ MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi3
++ export MPI_PYTHON_SITEARCH
++ MPI_SUFFIX=_openmpi3
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi3-arm
++ export MPI_SYSCONFIG
++ PATH=/usr/lib/openmpi3/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ PKG_CONFIG_PATH=/usr/lib/openmpi3/lib/pkgconfig:/usr/lib/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi3
++ export PYTHONPATH
++ _LMFILES_=/etc/modulefiles/mpi/openmpi3-arm
++ export _LMFILES_
+ make -C openmpi3 -j4 test CTEST_OUTPUT_ON_FAILURE=1
make: Entering directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3'
Running tests...
/usr/bin/ctest3 --force-new-ctest-process 
Test project /builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3
      Start  1: ShowHelp
 1/54 Test  #1: ShowHelp ..............................   Passed    1.20 sec
      Start  2: test_core_balance_001_serial
 2/54 Test  #2: test_core_balance_001_serial ..........   Passed    1.54 sec
      Start  3: test_core_balance_002_serial
 3/54 Test  #3: test_core_balance_002_serial ..........   Passed    1.53 sec
      Start  4: test_core_balance_003_serial
 4/54 Test  #4: test_core_balance_003_serial ..........   Passed    1.52 sec
      Start  5: test_core_balance_004_serial
 5/54 Test  #5: test_core_balance_004_serial ..........   Passed    1.52 sec
      Start  6: test_core_balance_005_serial
 6/54 Test  #6: test_core_balance_005_serial ..........   Passed    1.51 sec
      Start  7: test_core_balance_006_serial
 7/54 Test  #7: test_core_balance_006_serial ..........   Passed    1.53 sec
      Start  8: test_core_comm_style_001_serial
 8/54 Test  #8: test_core_comm_style_001_serial .......   Passed    1.54 sec
      Start  9: test_core_comm_style_002_serial
 9/54 Test  #9: test_core_comm_style_002_serial .......   Passed    1.53 sec
      Start 10: test_core_displace_atoms_000_serial
10/54 Test #10: test_core_displace_atoms_000_serial ...   Passed    7.25 sec
      Start 11: test_core_displace_atoms_001_serial
11/54 Test #11: test_core_displace_atoms_001_serial ...   Passed    7.24 sec
      Start 12: test_core_displace_atoms_002_serial
12/54 Test #12: test_core_displace_atoms_002_serial ...   Passed    7.30 sec
      Start 13: test_core_empty_000_serial
13/54 Test #13: test_core_empty_000_serial ............   Passed    0.61 sec
      Start 14: test_core_empty_001_serial
14/54 Test #14: test_core_empty_001_serial ............   Passed    0.60 sec
      Start 15: test_core_empty_002_serial
15/54 Test #15: test_core_empty_002_serial ............   Passed    0.59 sec
      Start 16: test_core_min_001_serial
16/54 Test #16: test_core_min_001_serial ..............   Passed    8.90 sec
      Start 17: test_core_min_002_serial
17/54 Test #17: test_core_min_002_serial ..............   Passed   41.74 sec
      Start 18: test_core_min_003_serial
18/54 Test #18: test_core_min_003_serial ..............   Passed    9.22 sec
      Start 19: test_core_min_004_serial
19/54 Test #19: test_core_min_004_serial ..............   Passed    4.95 sec
      Start 20: test_core_min_005_serial
20/54 Test #20: test_core_min_005_serial ..............   Passed    5.04 sec
      Start 21: test_core_min_006_serial
21/54 Test #21: test_core_min_006_serial ..............   Passed    5.20 sec
      Start 22: test_core_min_007_serial
22/54 Test #22: test_core_min_007_serial ..............   Passed    9.67 sec
      Start 23: test_core_min_008_serial
23/54 Test #23: test_core_min_008_serial ..............   Passed    5.05 sec
      Start 24: test_core_min_009_serial
24/54 Test #24: test_core_min_009_serial ..............   Passed   10.17 sec
      Start 25: test_core_processors_001_serial
25/54 Test #25: test_core_processors_001_serial .......   Passed    1.55 sec
      Start 26: test_core_processors_002_serial
26/54 Test #26: test_core_processors_002_serial .......   Passed    1.53 sec
      Start 27: test_core_read_data_001_serial
27/54 Test #27: test_core_read_data_001_serial ........   Passed    0.61 sec
      Start 28: test_core_read_data_002_serial
28/54 Test #28: test_core_read_data_002_serial ........   Passed    0.59 sec
      Start 29: test_core_read_data_003_serial
29/54 Test #29: test_core_read_data_003_serial ........   Passed    0.59 sec
      Start 30: test_core_read_data_004_serial
30/54 Test #30: test_core_read_data_004_serial ........   Passed    0.60 sec
      Start 31: test_core_read_data_005_serial
31/54 Test #31: test_core_read_data_005_serial ........   Passed    0.61 sec
      Start 32: test_core_read_data_006_serial
32/54 Test #32: test_core_read_data_006_serial ........   Passed    0.64 sec
      Start 33: test_core_rerun_001_serial
33/54 Test #33: test_core_rerun_001_serial ............   Passed    8.85 sec
      Start 34: test_core_rerun_002_serial
34/54 Test #34: test_core_rerun_002_serial ............   Passed   11.11 sec
      Start 35: test_core_rerun_003_serial
35/54 Test #35: test_core_rerun_003_serial ............   Passed    9.10 sec
      Start 36: test_core_rerun_004_serial
36/54 Test #36: test_core_rerun_004_serial ............   Passed    9.24 sec
      Start 37: test_core_rerun_005_serial
37/54 Test #37: test_core_rerun_005_serial ............   Passed    9.21 sec
      Start 38: test_core_rerun_006_serial
38/54 Test #38: test_core_rerun_006_serial ............   Passed    8.98 sec
      Start 39: test_core_respa_000_serial
39/54 Test #39: test_core_respa_000_serial ............   Passed   71.79 sec
      Start 40: test_core_respa_001_serial
40/54 Test #40: test_core_respa_001_serial ............   Passed   73.48 sec
      Start 41: test_core_respa_002_serial
41/54 Test #41: test_core_respa_002_serial ............   Passed    0.59 sec
      Start 42: test_core_respa_003_serial
42/54 Test #42: test_core_respa_003_serial ............   Passed    0.60 sec
      Start 43: test_core_respa_004_serial
43/54 Test #43: test_core_respa_004_serial ............   Passed    0.59 sec
      Start 44: test_core_respa_005_serial
44/54 Test #44: test_core_respa_005_serial ............   Passed    0.58 sec
      Start 45: test_core_respa_006_serial
45/54 Test #45: test_core_respa_006_serial ............   Passed    0.60 sec
      Start 46: test_core_respa_007_serial
46/54 Test #46: test_core_respa_007_serial ............   Passed    0.59 sec
      Start 47: test_core_respa_008_serial
47/54 Test #47: test_core_respa_008_serial ............   Passed    0.59 sec
      Start 48: test_core_respa_100_serial
48/54 Test #48: test_core_respa_100_serial ............   Passed   70.59 sec
      Start 49: test_core_respa_101_serial
49/54 Test #49: test_core_respa_101_serial ............   Passed   70.67 sec
      Start 50: test_core_respa_102_serial
50/54 Test #50: test_core_respa_102_serial ............   Passed   71.34 sec
      Start 51: test_core_respa_103_serial
51/54 Test #51: test_core_respa_103_serial ............   Passed   57.91 sec
      Start 52: test_core_respa_200_serial
52/54 Test #52: test_core_respa_200_serial ............   Passed    2.42 sec
      Start 53: test_core_respa_201_serial
53/54 Test #53: test_core_respa_201_serial ............   Passed    3.00 sec
      Start 54: test_core_respa_202_serial
54/54 Test #54: test_core_respa_202_serial ............   Passed    3.42 sec
100% tests passed, 0 tests failed out of 54
Total Test time (real) = 630.87 sec
make: Leaving directory `/builddir/build/BUILD/lammps-stable_7Aug2019/openmpi3'
+ test -n openmpi3
+ module unload mpi/openmpi3-arm
++ /usr/bin/modulecmd sh unload mpi/openmpi3-arm
+ eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON2_SITEARCH;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;'
++ MANPATH=/usr/share/man:/usr/local/share/man
++ export MANPATH
++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ PKG_CONFIG_PATH=/usr/lib/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset LD_LIBRARY_PATH
++ unset LOADEDMODULES
++ unset MPI_BIN
++ unset MPI_COMPILER
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset MPI_INCLUDE
++ unset MPI_LIB
++ unset MPI_MAN
++ unset MPI_PYTHON2_SITEARCH
++ unset MPI_PYTHON_SITEARCH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ unset PYTHONPATH
++ unset _LMFILES_
+ exit 0
Processing files: lammps-20190807-2.el7.armv7hl
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.8NTF7G
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-stable_7Aug2019
+ DOCDIR=/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/doc/lammps-20190807
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/doc/lammps-20190807
+ cp -pr README /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/doc/lammps-20190807
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.MnHBhR
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-stable_7Aug2019
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/licenses/lammps-20190807
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/licenses/lammps-20190807
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/licenses/lammps-20190807
+ exit 0
Provides: lammps = 20190807-2.el7 lammps(armv7hl-32) = 20190807-2.el7 liblammps.so.0
Requires(interp): /sbin/ldconfig /sbin/ldconfig
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires(post): /sbin/ldconfig
Requires(postun): /sbin/ldconfig
Requires: ld-linux-armhf.so.3 ld-linux-armhf.so.3(GLIBC_2.4) libOpenCL.so.1 libOpenCL.so.1(OPENCL_1.0) libOpenCL.so.1(OPENCL_1.2) libOpenCL.so.1(OPENCL_2.0) libc.so.6 libc.so.6(GLIBC_2.11) libc.so.6(GLIBC_2.15) libc.so.6(GLIBC_2.17) libc.so.6(GLIBC_2.4) libc.so.6(GLIBC_2.7) libdl.so.2 libfftw3.so.3 libgcc_s.so.1 libgcc_s.so.1(GCC_3.5) libgcc_s.so.1(GCC_4.0.0) libgomp.so.1 libgomp.so.1(GOMP_1.0) libgomp.so.1(OMP_1.0) libgomp.so.1(OMP_3.0) libhdf5.so.8 libjpeg.so.62 libjpeg.so.62(LIBJPEG_6.2) libkim-api.so.2 liblammps.so.0 libm.so.6 libm.so.6(GLIBC_2.4) libopenblas.so.0 libpng15.so.15 libpng15.so.15(PNG15_0) libpthread.so.0 libpthread.so.0(GLIBC_2.4) libpython3.6m.so.1.0 libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_ARM_1.3.3) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.15) libstdc++.so.6(GLIBCXX_3.4.9) libsz.so.2 libvoro++.so.0 libz.so.1 rtld(GNU_HASH)
Processing files: lammps-openmpi-20190807-2.el7.armv7hl
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.m4l2AT
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-stable_7Aug2019
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/licenses/lammps-openmpi-20190807
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/licenses/lammps-openmpi-20190807
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/licenses/lammps-openmpi-20190807
+ exit 0
Provides: lammps-openmpi = 20190807-2.el7 lammps-openmpi(armv7hl-32) = 20190807-2.el7 liblammps_openmpi.so.0
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: ld-linux-armhf.so.3 ld-linux-armhf.so.3(GLIBC_2.4) libOpenCL.so.1 libOpenCL.so.1(OPENCL_1.0) libOpenCL.so.1(OPENCL_1.2) libOpenCL.so.1(OPENCL_2.0) libc.so.6 libc.so.6(GLIBC_2.11) libc.so.6(GLIBC_2.15) libc.so.6(GLIBC_2.17) libc.so.6(GLIBC_2.4) libdl.so.2 libfftw3.so.3 libgcc_s.so.1 libgcc_s.so.1(GCC_3.5) libgcc_s.so.1(GCC_4.0.0) libgomp.so.1 libgomp.so.1(GOMP_1.0) libgomp.so.1(OMP_1.0) libgomp.so.1(OMP_3.0) libhdf5.so.8 libjpeg.so.62 libjpeg.so.62(LIBJPEG_6.2) libkim-api.so.2 liblammps_openmpi.so.0 libm.so.6 libm.so.6(GLIBC_2.4) libmpi.so.12 libmpi_cxx.so.1 libopenblas.so.0 libpng15.so.15 libpng15.so.15(PNG15_0) libpthread.so.0 libpthread.so.0(GLIBC_2.4) libpython3.6m.so.1.0 libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_ARM_1.3.3) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.15) libstdc++.so.6(GLIBCXX_3.4.9) libsz.so.2 libvoro++.so.0 libz.so.1 rtld(GNU_HASH)
Processing files: lammps-mpich-20190807-2.el7.armv7hl
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.ItHRsP
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-stable_7Aug2019
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/licenses/lammps-mpich-20190807
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/licenses/lammps-mpich-20190807
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/licenses/lammps-mpich-20190807
+ exit 0
Provides: lammps-mpich = 20190807-2.el7 lammps-mpich(armv7hl-32) = 20190807-2.el7 liblammps_mpich.so.0
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: ld-linux-armhf.so.3 ld-linux-armhf.so.3(GLIBC_2.4) libOpenCL.so.1 libOpenCL.so.1(OPENCL_1.0) libOpenCL.so.1(OPENCL_1.2) libOpenCL.so.1(OPENCL_2.0) libc.so.6 libc.so.6(GLIBC_2.11) libc.so.6(GLIBC_2.15) libc.so.6(GLIBC_2.4) libdl.so.2 libfftw3.so.3 libgcc_s.so.1 libgcc_s.so.1(GCC_3.5) libgcc_s.so.1(GCC_4.0.0) libgomp.so.1 libgomp.so.1(GOMP_1.0) libgomp.so.1(OMP_1.0) libgomp.so.1(OMP_3.0) libhdf5.so.8 libjpeg.so.62 libjpeg.so.62(LIBJPEG_6.2) libkim-api.so.2 liblammps_mpich.so.0 libm.so.6 libm.so.6(GLIBC_2.4) libmpich.so.10 libmpichcxx.so.10 libmpl.so.1 libopa.so.1 libopenblas.so.0 libpng15.so.15 libpng15.so.15(PNG15_0) libpthread.so.0 libpthread.so.0(GLIBC_2.4) libpython3.6m.so.1.0 librt.so.1 librt.so.1(GLIBC_2.4) libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_ARM_1.3.3) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.15) libstdc++.so.6(GLIBCXX_3.4.9) libsz.so.2 libvoro++.so.0 libz.so.1 rtld(GNU_HASH)
Processing files: python36-lammps-20190807-2.el7.armv7hl
Provides: python3-lammps = 20190807-2.el7 python3-lammps(armv7hl-32) = 20190807-2.el7 python36-lammps = 20190807-2.el7 python36-lammps(armv7hl-32) = 20190807-2.el7
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: python(abi) = 3.6
Processing files: lammps-headers-20190807-2.el7.armv7hl
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.j1PbSS
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-stable_7Aug2019
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/licenses/lammps-headers-20190807
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/licenses/lammps-headers-20190807
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/licenses/lammps-headers-20190807
+ exit 0
Provides: lammps-headers = 20190807-2.el7 lammps-headers(armv7hl-32) = 20190807-2.el7
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: lammps-devel-20190807-2.el7.armv7hl
Provides: lammps-devel = 20190807-2.el7 lammps-devel(armv7hl-32) = 20190807-2.el7 pkgconfig(liblammps) = 20190807
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/pkg-config liblammps.so.0
Processing files: lammps-mpich-devel-20190807-2.el7.armv7hl
Provides: lammps-mpich-devel = 20190807-2.el7 lammps-mpich-devel(armv7hl-32) = 20190807-2.el7
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: liblammps_mpich.so.0
Processing files: lammps-openmpi-devel-20190807-2.el7.armv7hl
Provides: lammps-openmpi-devel = 20190807-2.el7 lammps-openmpi-devel(armv7hl-32) = 20190807-2.el7
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: liblammps_openmpi.so.0
Processing files: lammps-openmpi3-20190807-2.el7.armv7hl
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.e47YaX
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-stable_7Aug2019
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/licenses/lammps-openmpi3-20190807
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/licenses/lammps-openmpi3-20190807
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/licenses/lammps-openmpi3-20190807
+ exit 0
Provides: lammps-openmpi3 = 20190807-2.el7 lammps-openmpi3(armv7hl-32) = 20190807-2.el7 liblammps_openmpi3.so.0
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: ld-linux-armhf.so.3 ld-linux-armhf.so.3(GLIBC_2.4) libOpenCL.so.1 libOpenCL.so.1(OPENCL_1.0) libOpenCL.so.1(OPENCL_1.2) libOpenCL.so.1(OPENCL_2.0) libc.so.6 libc.so.6(GLIBC_2.11) libc.so.6(GLIBC_2.15) libc.so.6(GLIBC_2.17) libc.so.6(GLIBC_2.4) libdl.so.2 libfftw3.so.3 libgcc_s.so.1 libgcc_s.so.1(GCC_3.5) libgcc_s.so.1(GCC_4.0.0) libgomp.so.1 libgomp.so.1(GOMP_1.0) libgomp.so.1(OMP_1.0) libgomp.so.1(OMP_3.0) libhdf5.so.8 libjpeg.so.62 libjpeg.so.62(LIBJPEG_6.2) libkim-api.so.2 liblammps_openmpi3.so.0 libm.so.6 libm.so.6(GLIBC_2.4) libmpi.so.40 libmpi_cxx.so.40 libopenblas.so.0 libpng15.so.15 libpng15.so.15(PNG15_0) libpthread.so.0 libpthread.so.0(GLIBC_2.4) libpython3.6m.so.1.0 libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_ARM_1.3.3) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.15) libstdc++.so.6(GLIBCXX_3.4.9) libsz.so.2 libvoro++.so.0 libz.so.1 rtld(GNU_HASH)
Processing files: lammps-openmpi3-devel-20190807-2.el7.armv7hl
Provides: lammps-openmpi3-devel = 20190807-2.el7 lammps-openmpi3-devel(armv7hl-32) = 20190807-2.el7
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: liblammps_openmpi3.so.0
Processing files: lammps-data-20190807-2.el7.noarch
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.N1sEn0
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-stable_7Aug2019
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/licenses/lammps-data-20190807
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/licenses/lammps-data-20190807
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm/usr/share/licenses/lammps-data-20190807
+ exit 0
Provides: config(lammps-data) = 20190807-2.el7 lammps-data = 20190807-2.el7
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: lammps-debuginfo-20190807-2.el7.armv7hl
Provides: lammps-debuginfo = 20190807-2.el7 lammps-debuginfo(armv7hl-32) = 20190807-2.el7
Requires(rpmlib): rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm
Wrote: /builddir/build/RPMS/lammps-20190807-2.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/lammps-openmpi-20190807-2.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/lammps-mpich-20190807-2.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/python36-lammps-20190807-2.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/lammps-headers-20190807-2.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/lammps-devel-20190807-2.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/lammps-mpich-devel-20190807-2.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/lammps-openmpi-devel-20190807-2.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/lammps-openmpi3-20190807-2.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/lammps-openmpi3-devel-20190807-2.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/lammps-data-20190807-2.el7.noarch.rpm
Wrote: /builddir/build/RPMS/lammps-debuginfo-20190807-2.el7.armv7hl.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.pm1r4G
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-stable_7Aug2019
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/lammps-20190807-2.el7.arm
+ exit 0
Child return code was: 0